Bhi09G002262 (gene) Wax gourd

NameBhi09G002262
Typegene
OrganismBenincasa hispida (Wax gourd)
Descriptionprotein HAPLESS 2 isoform X1
Locationchr9 : 72477892 .. 72478341 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATATGGACGTGTTTAGCTTCCTATTTCTATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGAAGACGACACCTTAGGAGAAGAGACCTGGAAGAAGAGTTTGAAAGCGAAGAAGGAAAATGTCAACATGGGTCAACAAGCGACTCGAGCAATGTCCCTGAACATGTCGAGTCGAGAAGTAGCAGACGGGCATGTCGTCGATGGAGGAGGAACCACAGAAGTTCTCGAATGAGAAAATCGTTGAGGCCGAGAGGTCATGGAATTCGAGTAAGGAGTGGTAGAGTGCTGGTCTATGGTAAGCATAGAAGAAAATCTGTTGAGGTTGGGAATCATTTGAATGAGATACATAGCTTTGGGATGTATGGATCATCCAAATTTGTGCATAAAGAAAGAAAATACAGAAGAGAAAGCCAAAGATGA

mRNA sequence

ATGATATGGACGTGTTTAGCTTCCTATTTCTATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGAAGACGACACCTTAGGAGAAGAGACCTGGAAGAAGAGTTTGAAAGCGAAGAAGGAAAATGTCAACATGGGTCAACAAGCGACTCGAGCAATGTCCCTGAACATGTCGAGTCGAGAAGTAGCAGACGGGCATGTCGTCGATGGAGGAGGAACCACAGAAGTTCTCGAATGAGAAAATCGTTGAGGCCGAGAGGTCATGGAATTCGAGTAAGGAGTGGTAGAGTGCTGGTCTATGGTAAGCATAGAAGAAAATCTGTTGAGGTTGGGAATCATTTGAATGAGATACATAGCTTTGGGATGTATGGATCATCCAAATTTGTGCATAAAGAAAGAAAATACAGAAGAGAAAGCCAAAGATGA

Coding sequence (CDS)

ATGATATGGACGTGTTTAGCTTCCTATTTCTATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGAAGACGACACCTTAGGAGAAGAGACCTGGAAGAAGAGTTTGAAAGCGAAGAAGGAAAATGTCAACATGGGTCAACAAGCGACTCGAGCAATGTCCCTGAACATGTCGAGTCGAGAAGTAGCAGACGGGCATGTCGTCGATGGAGGAGGAACCACAGAAGTTCTCGAATGAGAAAATCGTTGAGGCCGAGAGGTCATGGAATTCGAGTAAGGAGTGGTAGAGTGCTGGTCTATGGTAAGCATAGAAGAAAATCTGTTGAGGTTGGGAATCATTTGAATGAGATACATAGCTTTGGGATGTATGGATCATCCAAATTTGTGCATAAAGAAAGAAAATACAGAAGAGAAAGCCAAAGATGA

Protein sequence

MIWTCLASYFYAWEYCCTFMCIKLASVKRTRRRHLRRRDLEEEFESEEGKCQHGSTSDSSNVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRESQR
BLAST of Bhi09G002262 vs. TrEMBL
Match: tr|A0A1S4DVV8|A0A1S4DVV8_CUCME (protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.6e-47
Identity = 105/149 (70.47%), Postives = 111/149 (74.50%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDSS 60
           MIWTCLASYFYAWEYCC+FMCIKLAS                             TSDSS
Sbjct: 90  MIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRRRDLEEEFESEEGKCQHESTSDSS 149

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           NV EHVESRSSR + RRWRRNH+ S+ RKSLRP+GHG+RVRSGRVLVYGKHRRKSVEVGN
Sbjct: 150 NVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 209

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
           H NEI SFGMYGSSKFVHKERKYRR  QR
Sbjct: 210 HSNEIDSFGMYGSSKFVHKERKYRRGRQR 238

BLAST of Bhi09G002262 vs. TrEMBL
Match: tr|A0A1S3B9T1|A0A1S3B9T1_CUCME (uncharacterized protein LOC103487604 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.6e-47
Identity = 105/149 (70.47%), Postives = 111/149 (74.50%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDSS 60
           MIWTCLASYFYAWEYCC+FMCIKLAS                             TSDSS
Sbjct: 46  MIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRRRDLEEEFESEEGKCQHESTSDSS 105

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           NV EHVESRSSR + RRWRRNH+ S+ RKSLRP+GHG+RVRSGRVLVYGKHRRKSVEVGN
Sbjct: 106 NVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 165

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
           H NEI SFGMYGSSKFVHKERKYRR  QR
Sbjct: 166 HSNEIDSFGMYGSSKFVHKERKYRRGRQR 194

BLAST of Bhi09G002262 vs. TrEMBL
Match: tr|A0A0A0L1V0|A0A0A0L1V0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46
Identity = 103/149 (69.13%), Postives = 110/149 (73.83%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDSS 60
           MIWTCLASYFYAWEYCC FMCIKLAS                             TSDS+
Sbjct: 90  MIWTCLASYFYAWEYCCGFMCIKLASVKRTRRRHVRRRDMEEEFEIEEGKCRHESTSDST 149

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           NV EHVES+SSRR  +RWRRNHR S+ RKSLRP+GHG+RVRSGRVLVYGKHRRKSVEVGN
Sbjct: 150 NVLEHVESKSSRRVSQRWRRNHRDSQRRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 209

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
           HLNEI SFGMYGSSK+VHKERKYRR   R
Sbjct: 210 HLNEIDSFGMYGSSKYVHKERKYRRGRPR 238

BLAST of Bhi09G002262 vs. TrEMBL
Match: tr|A0A2I4GL38|A0A2I4GL38_9ROSI (uncharacterized protein LOC109008837 OS=Juglans regia OX=51240 GN=LOC109008837 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06
Identity = 48/148 (32.43%), Postives = 71/148 (47.97%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDSS 60
           ++W C++S F+AWEYCC F+ +KL                                 D  
Sbjct: 90  IVWACISSCFHAWEYCCIFLWVKLHKLKRVNRTHLEEEFDTSEEEY-----------DDG 149

Query: 61  NVPEHVESRS---SRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVE 120
           +   H+ SRS   ++    RW R+HR + +RK LRPR H I+V  GR  ++G  R  +++
Sbjct: 150 SFSYHM-SRSMDVNKSPSHRW-RSHRGAYLRKCLRPRSHRIQVAIGRDSIHG-GRGNAIK 209

Query: 121 VGNHLNEIHSFGMYGSSKFVHKERKYRR 146
              +   IH   +  +SKF HK RKYRR
Sbjct: 210 HWKNGTAIHDIRVTRTSKFAHKGRKYRR 223

BLAST of Bhi09G002262 vs. TrEMBL
Match: tr|A0A1Q3BVD2|A0A1Q3BVD2_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_15429 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06
Identity = 46/144 (31.94%), Postives = 65/144 (45.14%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDSS 60
           ++W C+ S+F  W+ CCTF+  KL                                S S 
Sbjct: 90  ILWACMTSWFSIWKICCTFLWFKLT--MVKKRNRIDRRDFDQELSTSEEEFNDDHKSFSY 149

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           +VP +           RW R+HR S +RKSLRPR + ++V  GR      +RR S++   
Sbjct: 150 HVPRYRTMDMGMSPSHRW-RDHRESLLRKSLRPRSYHVQVGIGRDSSIHGYRRNSIK--- 209

Query: 121 HLNEIHSFGMYGSSKFVHKERKYR 145
           H   +H F +  +SKFV K RKYR
Sbjct: 210 HRRHVHDFRVTHTSKFVQKSRKYR 227

BLAST of Bhi09G002262 vs. NCBI nr
Match: XP_008444189.1 (PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo] >XP_016899850.1 PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 3.9e-47
Identity = 105/149 (70.47%), Postives = 111/149 (74.50%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDSS 60
           MIWTCLASYFYAWEYCC+FMCIKLAS                             TSDSS
Sbjct: 90  MIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRRRDLEEEFESEEGKCQHESTSDSS 149

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           NV EHVESRSSR + RRWRRNH+ S+ RKSLRP+GHG+RVRSGRVLVYGKHRRKSVEVGN
Sbjct: 150 NVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 209

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
           H NEI SFGMYGSSKFVHKERKYRR  QR
Sbjct: 210 HSNEIDSFGMYGSSKFVHKERKYRRGRQR 238

BLAST of Bhi09G002262 vs. NCBI nr
Match: XP_008444191.1 (PREDICTED: uncharacterized protein LOC103487604 isoform X2 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 3.9e-47
Identity = 105/149 (70.47%), Postives = 111/149 (74.50%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDSS 60
           MIWTCLASYFYAWEYCC+FMCIKLAS                             TSDSS
Sbjct: 46  MIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRRRDLEEEFESEEGKCQHESTSDSS 105

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           NV EHVESRSSR + RRWRRNH+ S+ RKSLRP+GHG+RVRSGRVLVYGKHRRKSVEVGN
Sbjct: 106 NVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 165

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
           H NEI SFGMYGSSKFVHKERKYRR  QR
Sbjct: 166 HSNEIDSFGMYGSSKFVHKERKYRRGRQR 194

BLAST of Bhi09G002262 vs. NCBI nr
Match: XP_004142706.1 (PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis sativus] >XP_011653780.1 PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis sativus] >KGN54547.1 hypothetical protein Csa_4G361810 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 2.0e-46
Identity = 103/149 (69.13%), Postives = 110/149 (73.83%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDSS 60
           MIWTCLASYFYAWEYCC FMCIKLAS                             TSDS+
Sbjct: 90  MIWTCLASYFYAWEYCCGFMCIKLASVKRTRRRHVRRRDMEEEFEIEEGKCRHESTSDST 149

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           NV EHVES+SSRR  +RWRRNHR S+ RKSLRP+GHG+RVRSGRVLVYGKHRRKSVEVGN
Sbjct: 150 NVLEHVESKSSRRVSQRWRRNHRDSQRRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 209

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
           HLNEI SFGMYGSSK+VHKERKYRR   R
Sbjct: 210 HLNEIDSFGMYGSSKYVHKERKYRRGRPR 238

BLAST of Bhi09G002262 vs. NCBI nr
Match: XP_011653781.1 (PREDICTED: uncharacterized protein LOC101218855 isoform X2 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 2.0e-46
Identity = 103/149 (69.13%), Postives = 110/149 (73.83%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDSS 60
           MIWTCLASYFYAWEYCC FMCIKLAS                             TSDS+
Sbjct: 46  MIWTCLASYFYAWEYCCGFMCIKLASVKRTRRRHVRRRDMEEEFEIEEGKCRHESTSDST 105

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           NV EHVES+SSRR  +RWRRNHR S+ RKSLRP+GHG+RVRSGRVLVYGKHRRKSVEVGN
Sbjct: 106 NVLEHVESKSSRRVSQRWRRNHRDSQRRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 165

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
           HLNEI SFGMYGSSK+VHKERKYRR   R
Sbjct: 166 HLNEIDSFGMYGSSKYVHKERKYRRGRPR 194

BLAST of Bhi09G002262 vs. NCBI nr
Match: XP_022154011.1 (uncharacterized protein LOC111021352 [Momordica charantia])

HSP 1 Score: 156.8 bits (395), Expect = 5.9e-35
Identity = 107/149 (71.81%), Postives = 120/149 (80.54%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDSS 60
           M WTC+ASYFYAW+YCCTFMCIKL S    XXXXXXXXXXXXXXXXXXXXXXX      S
Sbjct: 97  MTWTCIASYFYAWDYCCTFMCIKLGSVKRTXXXXXXXXXXXXXXXXXXXXXXXGSXXXXS 156

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           +VPE +E RSS+RA RRWR NHR S+MRK+LRP+  GIRVRSGR LVYGKHRRKS EV N
Sbjct: 157 SVPERIELRSSQRASRRWRMNHRGSQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVN 216

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
            L EIHS G +GSSKFVH+E +Y+R  Q+
Sbjct: 217 RLGEIHSLGRHGSSKFVHEEIRYKRGRQK 245

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S4DVV8|A0A1S4DVV8_CUCME2.6e-4770.47protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1[more]
tr|A0A1S3B9T1|A0A1S3B9T1_CUCME2.6e-4770.47uncharacterized protein LOC103487604 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0L1V0|A0A0A0L1V0_CUCSA1.3e-4669.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1[more]
tr|A0A2I4GL38|A0A2I4GL38_9ROSI2.9e-0632.43uncharacterized protein LOC109008837 OS=Juglans regia OX=51240 GN=LOC109008837 P... [more]
tr|A0A1Q3BVD2|A0A1Q3BVD2_CEPFO2.9e-0631.94Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_15429 PE=4... [more]
Match NameE-valueIdentityDescription
XP_008444189.13.9e-4770.47PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo] >XP_016899850.1 PREDICTED... [more]
XP_008444191.13.9e-4770.47PREDICTED: uncharacterized protein LOC103487604 isoform X2 [Cucumis melo][more]
XP_004142706.12.0e-4669.13PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis sativus] >XP_011653780.1 PREDIC... [more]
XP_011653781.12.0e-4669.13PREDICTED: uncharacterized protein LOC101218855 isoform X2 [Cucumis sativus][more]
XP_022154011.15.9e-3571.81uncharacterized protein LOC111021352 [Momordica charantia][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M002262Bhi09M002262mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..95
NoneNo IPR availablePANTHERPTHR35278FAMILY NOT NAMEDcoord: 1..147
NoneNo IPR availablePANTHERPTHR35278:SF1F8K7.16coord: 1..147

The following gene(s) are paralogous to this gene:

None