Cla023183 (gene) Watermelon (97103) v1

NameCla023183
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr11 : 18241896 .. 18242345 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATATGGACTTGTTTATCTTCTTATTTCTATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAATGTCAAAAGAACAAGAAGACGGCACTTTAGGAGAAGAGACCTTGAAGAAGAGTATGAAAGCGAAGAAGGAAAATGTCAGCATGGGTCAACAAGTGACTCGAGTAATGTCCCCGACCATGTCGAGTCGAGAAGTAGTAGACGGGTGTCTCGTCGATGGAGGAGGAACCACAAACGTTCTCAAATGAGAAAATCGTTGAGGCCGAAAGGTCATGGAATTCGAGTAAGGAGTGGTAGAGTGTTGGTCTATGGTAAGCATAAAAGAAAATGTGTTGAGGTTGGGAATCATTTGAATGAGAAACATAGCTTTGGGATGTATGGATCATCCAAATGTGTGCATAAAGAAAGGAAATATAGAAGAGGAAGGCAAAGATGA

mRNA sequence

ATGATATGGACTTGTTTATCTTCTTATTTCTATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAATGTCAAAAGAACAAGAAGACGGCACTTTAGGAGAAGAGACCTTGAAGAAGAGTATGAAAGCGAAGAAGGAAAATGTCAGCATGGGTCAACAAGTGACTCGAGTAATGTCCCCGACCATGTCGAGTCGAGAAGTAGTAGACGGGTGTCTCGTCGATGGAGGAGGAACCACAAACGTTCTCAAATGAGAAAATCGTTGAGGCCGAAAGGTCATGGAATTCGAGTAAGGAGTGGTAGAGTGTTGGTCTATGGTAAGCATAAAAGAAAATGTGTTGAGGTTGGGAATCATTTGAATGAGAAACATAGCTTTGGGATGTATGGATCATCCAAATGTGTGCATAAAGAAAGGAAATATAGAAGAGGAAGGCAAAGATGA

Coding sequence (CDS)

ATGATATGGACTTGTTTATCTTCTTATTTCTATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAATGTCAAAAGAACAAGAAGACGGCACTTTAGGAGAAGAGACCTTGAAGAAGAGTATGAAAGCGAAGAAGGAAAATGTCAGCATGGGTCAACAAGTGACTCGAGTAATGTCCCCGACCATGTCGAGTCGAGAAGTAGTAGACGGGTGTCTCGTCGATGGAGGAGGAACCACAAACGTTCTCAAATGAGAAAATCGTTGAGGCCGAAAGGTCATGGAATTCGAGTAAGGAGTGGTAGAGTGTTGGTCTATGGTAAGCATAAAAGAAAATGTGTTGAGGTTGGGAATCATTTGAATGAGAAACATAGCTTTGGGATGTATGGATCATCCAAATGTGTGCATAAAGAAAGGAAATATAGAAGAGGAAGGCAAAGATGA

Protein sequence

MIWTCLSSYFYAWEYCCTFMCIKLANVKRTRRRHFRRRDLEEEYESEEGKCQHGSTSDSSNVPDHVESRSSRRVSRRWRRNHKRSQMRKSLRPKGHGIRVRSGRVLVYGKHKRKCVEVGNHLNEKHSFGMYGSSKCVHKERKYRRGRQR
BLAST of Cla023183 vs. TrEMBL
Match: A0A0A0L1V0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G361810 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.8e-69
Identity = 125/149 (83.89%), Postives = 137/149 (91.95%), Query Frame = 1

Query: 1   MIWTCLSSYFYAWEYCCTFMCIKLANVKRTRRRHFRRRDLEEEYESEEGKCQHGSTSDSS 60
           MIWTCL+SYFYAWEYCC FMCIKLA+VKRTRRRH RRRD+EEE+E EEGKC+H STSDS+
Sbjct: 90  MIWTCLASYFYAWEYCCGFMCIKLASVKRTRRRHVRRRDMEEEFEIEEGKCRHESTSDST 149

Query: 61  NVPDHVESRSSRRVSRRWRRNHKRSQMRKSLRPKGHGIRVRSGRVLVYGKHKRKCVEVGN 120
           NV +HVES+SSRRVS+RWRRNH+ SQ RKSLRPKGHG+RVRSGRVLVYGKH+RK VEVGN
Sbjct: 150 NVLEHVESKSSRRVSQRWRRNHRDSQRRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 209

Query: 121 HLNEKHSFGMYGSSKCVHKERKYRRGRQR 150
           HLNE  SFGMYGSSK VHKERKYRRGR R
Sbjct: 210 HLNEIDSFGMYGSSKYVHKERKYRRGRPR 238

BLAST of Cla023183 vs. TrEMBL
Match: V4SIE5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003748mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.2e-15
Identity = 49/149 (32.89%), Postives = 80/149 (53.69%), Query Frame = 1

Query: 1   MIWTCLSSYFYAWEYCCTFMCIKLANVKRTRRRHFRRRDLEEEYESEEGKCQHGSTSDSS 60
           ++W CL S+F  WEYCCTF  +KL  +KR  + H  RR++E E+++ E    +    +S 
Sbjct: 90  ILWACLVSWFSIWEYCCTFFWVKLIKLKRRNQVH--RRNIEHEFDTSEADAYYDYDVESY 149

Query: 61  NVPDHVESRSSRRVSRRWRRNHKRSQMRKSLRPKGHGIRVRSGRVLVY---GKHKRKCVE 120
           +  D   +RS    SR    +++ + +RKSLRP+ H +R+   R  ++     H+R  ++
Sbjct: 150 SFDDSPRNRSLS--SRSREIDYRGTHLRKSLRPRSHNVRLGISRDSMHRHGHSHRRNTIK 209

Query: 121 VGNHLNEKHSFGMYGSSKCVHKERKYRRG 147
              H    H   +  SSK V K+R  +RG
Sbjct: 210 QHTHNGTIHGIKVAHSSKFVKKDRSNKRG 234

BLAST of Cla023183 vs. TrEMBL
Match: A0A0B2QJV3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_048624 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.1e-15
Identity = 55/159 (34.59%), Postives = 84/159 (52.83%), Query Frame = 1

Query: 1   MIWTCLSSYFYAWEYCCTFMCIKLANVKRTRRRHFRRR------DLEEEYESEEGKCQHG 60
           MIWTC SS F+ WEY CTF+C+ L  +KR RRR  RRR      D+ +E+  + G+    
Sbjct: 90  MIWTCFSSCFHVWEYSCTFLCVMLHKLKRRRRRRRRRRRRRFRMDMNQEFYFKTGE---D 149

Query: 61  STSDSSNVPDHVESRSSRRVSRRWRRNHKRSQMRKSLRPKGHGIRVRSGRVLVYGKHKRK 120
            T +S +      +++SR +SRR RR++K S +R+SL+P+ H  RV   R L Y ++   
Sbjct: 150 YTDESLSYHFPASAKTSRSISRR-RRDYKGSHLRRSLQPRKHHARVEISRDLRYKRNHSH 209

Query: 121 --------CVEVGNHLNEKHSFGMYGSSKCVHKERKYRR 146
                     + GN++   H   +  +SK      K +R
Sbjct: 210 GDPSYTSIATKHGNYIGTFHDIKVTRTSKFAKGITKRKR 244

BLAST of Cla023183 vs. TrEMBL
Match: A0A067GLF3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036319mg PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.2e-15
Identity = 48/149 (32.21%), Postives = 79/149 (53.02%), Query Frame = 1

Query: 1   MIWTCLSSYFYAWEYCCTFMCIKLANVKRTRRRHFRRRDLEEEYESEEGKCQHGSTSDSS 60
           ++W CL S+F  WEYCCTF  +KL  +KR  + H  RR++E ++++ E    +    +S 
Sbjct: 90  ILWACLVSWFSIWEYCCTFFWVKLIKLKRRNQVH--RRNIEHKFDTSEADAYYDYDVESH 149

Query: 61  NVPDHVESRSSRRVSRRWRRNHKRSQMRKSLRPKGHGIRVRSGRVLVY---GKHKRKCVE 120
           +  D    RS    SR    +++ + +RKSLRP+ H +R+   R  ++     H+R  ++
Sbjct: 150 SFDDSPRDRSLS--SRSREIDYRGTHLRKSLRPRSHNVRLGISRDSMHRHGHSHRRNTIK 209

Query: 121 VGNHLNEKHSFGMYGSSKCVHKERKYRRG 147
              H    H   +  SSK V K+R  +RG
Sbjct: 210 QHTHNGTIHGIKVAHSSKFVKKDRSNKRG 234

BLAST of Cla023183 vs. TrEMBL
Match: A0A0D2S7R6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G247900 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-14
Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = 1

Query: 1   MIWTCLSSYFYAWEYCCTFMCIKLANVK---RTRRRHFRRRDLEEEYESEEGKCQHGSTS 60
           M+W C+S +F +WE+CCTF+C KL N+K   R RRR  RR+ + +  E +E      S S
Sbjct: 90  MVWGCISCWFSSWEFCCTFLCHKLRNIKRIDRRRRRPRRRKRVTDPSEDDE------SFS 149

Query: 61  DSSNVPDHVESRSSRRVSRRWRRNHKRSQMRKSLRPKGHGIRVRSGRVLVYGKHKRKCVE 120
             S+ P  V + S   VS R  RN+K   +R+SLRP+ H I V   R  +Y   KRK ++
Sbjct: 150 YGSSRPMEVSNHS---VSGR-LRNYKGVHLRRSLRPRNHRINVGISRDALY---KRKPIK 209

Query: 121 VGNHLNEKHSFGMYGSSKCVHKERKYR 145
              H+N  H   +  +SK  HK   Y+
Sbjct: 210 ---HINTVHDIRVTHTSKFAHKGSSYK 220

BLAST of Cla023183 vs. NCBI nr
Match: gi|659086942|ref|XP_008444191.1| (PREDICTED: uncharacterized protein LOC103487604 isoform X2 [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 1.3e-70
Identity = 130/149 (87.25%), Postives = 137/149 (91.95%), Query Frame = 1

Query: 1   MIWTCLSSYFYAWEYCCTFMCIKLANVKRTRRRHFRRRDLEEEYESEEGKCQHGSTSDSS 60
           MIWTCL+SYFYAWEYCC+FMCIKLA+VKRTRRRH RRRDLEEE+ESEEGKCQH STSDSS
Sbjct: 46  MIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRRRDLEEEFESEEGKCQHESTSDSS 105

Query: 61  NVPDHVESRSSRRVSRRWRRNHKRSQMRKSLRPKGHGIRVRSGRVLVYGKHKRKCVEVGN 120
           NV +HVESRSSR  SRRWRRNHK SQ RKSLRPKGHG+RVRSGRVLVYGKH+RK VEVGN
Sbjct: 106 NVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 165

Query: 121 HLNEKHSFGMYGSSKCVHKERKYRRGRQR 150
           H NE  SFGMYGSSK VHKERKYRRGRQR
Sbjct: 166 HSNEIDSFGMYGSSKFVHKERKYRRGRQR 194

BLAST of Cla023183 vs. NCBI nr
Match: gi|659086938|ref|XP_008444189.1| (PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 1.3e-70
Identity = 130/149 (87.25%), Postives = 137/149 (91.95%), Query Frame = 1

Query: 1   MIWTCLSSYFYAWEYCCTFMCIKLANVKRTRRRHFRRRDLEEEYESEEGKCQHGSTSDSS 60
           MIWTCL+SYFYAWEYCC+FMCIKLA+VKRTRRRH RRRDLEEE+ESEEGKCQH STSDSS
Sbjct: 90  MIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRRRDLEEEFESEEGKCQHESTSDSS 149

Query: 61  NVPDHVESRSSRRVSRRWRRNHKRSQMRKSLRPKGHGIRVRSGRVLVYGKHKRKCVEVGN 120
           NV +HVESRSSR  SRRWRRNHK SQ RKSLRPKGHG+RVRSGRVLVYGKH+RK VEVGN
Sbjct: 150 NVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 209

Query: 121 HLNEKHSFGMYGSSKCVHKERKYRRGRQR 150
           H NE  SFGMYGSSK VHKERKYRRGRQR
Sbjct: 210 HSNEIDSFGMYGSSKFVHKERKYRRGRQR 238

BLAST of Cla023183 vs. NCBI nr
Match: gi|449449908|ref|XP_004142706.1| (PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 5.5e-69
Identity = 125/149 (83.89%), Postives = 137/149 (91.95%), Query Frame = 1

Query: 1   MIWTCLSSYFYAWEYCCTFMCIKLANVKRTRRRHFRRRDLEEEYESEEGKCQHGSTSDSS 60
           MIWTCL+SYFYAWEYCC FMCIKLA+VKRTRRRH RRRD+EEE+E EEGKC+H STSDS+
Sbjct: 90  MIWTCLASYFYAWEYCCGFMCIKLASVKRTRRRHVRRRDMEEEFEIEEGKCRHESTSDST 149

Query: 61  NVPDHVESRSSRRVSRRWRRNHKRSQMRKSLRPKGHGIRVRSGRVLVYGKHKRKCVEVGN 120
           NV +HVES+SSRRVS+RWRRNH+ SQ RKSLRPKGHG+RVRSGRVLVYGKH+RK VEVGN
Sbjct: 150 NVLEHVESKSSRRVSQRWRRNHRDSQRRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 209

Query: 121 HLNEKHSFGMYGSSKCVHKERKYRRGRQR 150
           HLNE  SFGMYGSSK VHKERKYRRGR R
Sbjct: 210 HLNEIDSFGMYGSSKYVHKERKYRRGRPR 238

BLAST of Cla023183 vs. NCBI nr
Match: gi|778694306|ref|XP_011653781.1| (PREDICTED: uncharacterized protein LOC101218855 isoform X2 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 5.5e-69
Identity = 125/149 (83.89%), Postives = 137/149 (91.95%), Query Frame = 1

Query: 1   MIWTCLSSYFYAWEYCCTFMCIKLANVKRTRRRHFRRRDLEEEYESEEGKCQHGSTSDSS 60
           MIWTCL+SYFYAWEYCC FMCIKLA+VKRTRRRH RRRD+EEE+E EEGKC+H STSDS+
Sbjct: 46  MIWTCLASYFYAWEYCCGFMCIKLASVKRTRRRHVRRRDMEEEFEIEEGKCRHESTSDST 105

Query: 61  NVPDHVESRSSRRVSRRWRRNHKRSQMRKSLRPKGHGIRVRSGRVLVYGKHKRKCVEVGN 120
           NV +HVES+SSRRVS+RWRRNH+ SQ RKSLRPKGHG+RVRSGRVLVYGKH+RK VEVGN
Sbjct: 106 NVLEHVESKSSRRVSQRWRRNHRDSQRRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 165

Query: 121 HLNEKHSFGMYGSSKCVHKERKYRRGRQR 150
           HLNE  SFGMYGSSK VHKERKYRRGR R
Sbjct: 166 HLNEIDSFGMYGSSKYVHKERKYRRGRPR 194

BLAST of Cla023183 vs. NCBI nr
Match: gi|359492377|ref|XP_003634404.1| (PREDICTED: uncharacterized protein LOC100854126 [Vitis vinifera])

HSP 1 Score: 99.4 bits (246), Expect = 5.7e-18
Identity = 52/144 (36.11%), Postives = 77/144 (53.47%), Query Frame = 1

Query: 1   MIWTCLSSYFYAWEYCCTFMCIKLANVKRTRRRHFRRRDLEEEYESEEGKCQHGSTSDSS 60
           M+W C  S F AWEYCCTF+C+KL  +KRT R H +      +++  +  C     S+  
Sbjct: 90  MVWACFISCFSAWEYCCTFLCVKLPRLKRTNRGHIK------DFQVSDSSCDGEGDSEIF 149

Query: 61  NVPDHVESRSSRRVSRRWRRNHKRSQMRKSLRPKGHGIRVRSGRVLVYGKHKRKCVEVGN 120
           +   H      R  SRRW R+H+ S +RKSLRP+ H IRV   R  V+   +R  ++  N
Sbjct: 150 SYNAHRPIEVRRPPSRRW-RDHRASHLRKSLRPRSHQIRVGISRDSVHSS-RRNSIKHDN 209

Query: 121 HLNEKHSFGMYGSSKCVHKERKYR 145
           ++N  H   +  +SK V K   ++
Sbjct: 210 YINTVHGIRVTRTSKFVQKGLSFK 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L1V0_CUCSA3.8e-6983.89Uncharacterized protein OS=Cucumis sativus GN=Csa_4G361810 PE=4 SV=1[more]
V4SIE5_9ROSI3.2e-1532.89Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003748mg PE=4 SV=1[more]
A0A0B2QJV3_GLYSO7.1e-1534.59Uncharacterized protein OS=Glycine soja GN=glysoja_048624 PE=4 SV=1[more]
A0A067GLF3_CITSI9.2e-1532.21Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036319mg PE=4 SV=1[more]
A0A0D2S7R6_GOSRA1.2e-1438.78Uncharacterized protein OS=Gossypium raimondii GN=B456_009G247900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659086942|ref|XP_008444191.1|1.3e-7087.25PREDICTED: uncharacterized protein LOC103487604 isoform X2 [Cucumis melo][more]
gi|659086938|ref|XP_008444189.1|1.3e-7087.25PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo][more]
gi|449449908|ref|XP_004142706.1|5.5e-6983.89PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis sativus][more]
gi|778694306|ref|XP_011653781.1|5.5e-6983.89PREDICTED: uncharacterized protein LOC101218855 isoform X2 [Cucumis sativus][more]
gi|359492377|ref|XP_003634404.1|5.7e-1836.11PREDICTED: uncharacterized protein LOC100854126 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU40920watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla023183Cla023183.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU40920WMU40920transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35278FAMILY NOT NAMEDcoord: 1..149
score: 1.2
NoneNo IPR availablePANTHERPTHR35278:SF1F8K7.16coord: 1..149
score: 1.2

The following gene(s) are paralogous to this gene:

None