Bhi09G001888 (gene) Wax gourd

Overview
NameBhi09G001888
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr9 : 62094182 .. 62094433 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCAGCTACACTTACCTCAGTCGCTCTTCGCTATTTATTCTTTGGTGTAATGATGTTTACTATCACAACGGCGATATTCGAAACCGCTGAACCGTTGACAACTTATGGCAACTATGAATCTCAAGTGAAGCAAGATGATGTTCGTTTGAAGGTCGAGTCGGAAGAAATTGTGGCAGAGGCAGACTACGGCCCCTGGAATCCAAACCCCATGTTTGGGGGAGGAAGAGCAGGCCGCATTCCCCATTAA

mRNA sequence

ATGGAAGCAGCTACACTTACCTCAGTCGCTCTTCGCTATTTATTCTTTGGTGTAATGATGTTTACTATCACAACGGCGATATTCGAAACCGCTGAACCGTTGACAACTTATGGCAACTATGAATCTCAAGTGAAGCAAGATGATGTTCGTTTGAAGGTCGAGTCGGAAGAAATTGTGGCAGAGGCAGACTACGGCCCCTGGAATCCAAACCCCATGTTTGGGGGAGGAAGAGCAGGCCGCATTCCCCATTAA

Coding sequence (CDS)

ATGGAAGCAGCTACACTTACCTCAGTCGCTCTTCGCTATTTATTCTTTGGTGTAATGATGTTTACTATCACAACGGCGATATTCGAAACCGCTGAACCGTTGACAACTTATGGCAACTATGAATCTCAAGTGAAGCAAGATGATGTTCGTTTGAAGGTCGAGTCGGAAGAAATTGTGGCAGAGGCAGACTACGGCCCCTGGAATCCAAACCCCATGTTTGGGGGAGGAAGAGCAGGCCGCATTCCCCATTAA

Protein sequence

MEAATLTSVALRYLFFGVMMFTITTAIFETAEPLTTYGNYESQVKQDDVRLKVESEEIVAEADYGPWNPNPMFGGGRAGRIPH
Homology
[Close]
BLAST of Bhi09G001888 vs. TrEMBL
Match: tr|A0A0A0L6C3|A0A0A0L6C3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006675 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-10
Identity = 40/65 (61.54%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 19 MMFTITTAIFETAEPLTTYGNYESQVKQDDVRLKVESEEIVAEADYGPWNPNPMFGGGRA 78
          MMFTI T I  T  P +TYGNYE QVK DD  LK +SE +    DY  W+PNP+FGGGRA
Sbjct: 1  MMFTIITTISVTNAP-STYGNYEYQVKGDDGHLKDDSEIV---TDYVDWSPNPIFGGGRA 60

Query: 79 GRIPH 84
          G IPH
Sbjct: 61 GLIPH 61

[Close]
BLAST of Bhi09G001888 vs. NCBI nr
Match: KGN55706.1 (hypothetical protein Csa_3G006675 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-10
Identity = 40/65 (61.54%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 19 MMFTITTAIFETAEPLTTYGNYESQVKQDDVRLKVESEEIVAEADYGPWNPNPMFGGGRA 78
          MMFTI T I  T  P +TYGNYE QVK DD  LK +SE +    DY  W+PNP+FGGGRA
Sbjct: 1  MMFTIITTISVTNAP-STYGNYEYQVKGDDGHLKDDSEIV---TDYVDWSPNPIFGGGRA 60

Query: 79 GRIPH 84
          G IPH
Sbjct: 61 GLIPH 61

The following BLAST results are available for this feature:
BLAST of Bhi09G001888 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi09G001888 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi09G001888 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L6C3|A0A0A0L6C3_CUCSA1.9e-1061.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006675 PE=4 SV=1[more]
BLAST of Bhi09G001888 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55706.12.8e-1061.54hypothetical protein Csa_3G006675 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001888Bhi09M001888mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi09G001888ClCG05G018580Watermelon (Charleston Gray)wcgwgoB482
Bhi09G001888CSPI03G43150Wild cucumber (PI 183967)cpiwgoB345
Bhi09G001888CmaCh01G019480Cucurbita maxima (Rimu)cmawgoB0604
Bhi09G001888Cla020807Watermelon (97103) v1wgowmB626
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi09G001888Bottle gourd (USVL1VR-Ls)lsiwgoB396
Bhi09G001888Watermelon (97103) v2wgowmbB582
Bhi09G001888Silver-seed gourdcarwgoB0121
Bhi09G001888Silver-seed gourdcarwgoB1096
Bhi09G001888Cucurbita maxima (Rimu)cmawgoB0040
Bhi09G001888Cucurbita moschata (Rifu)cmowgoB0034
Bhi09G001888Cucurbita moschata (Rifu)cmowgoB0603
Bhi09G001888Cucurbita pepo (Zucchini)cpewgoB0729
Bhi09G001888Cucurbita pepo (Zucchini)cpewgoB1001