Bhi09M001888 (mRNA) Wax gourd

Overview
NameBhi09M001888
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr9 : 62094182 .. 62094433 (-)
Sequence length252
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCAGCTACACTTACCTCAGTCGCTCTTCGCTATTTATTCTTTGGTGTAATGATGTTTACTATCACAACGGCGATATTCGAAACCGCTGAACCGTTGACAACTTATGGCAACTATGAATCTCAAGTGAAGCAAGATGATGTTCGTTTGAAGGTCGAGTCGGAAGAAATTGTGGCAGAGGCAGACTACGGCCCCTGGAATCCAAACCCCATGTTTGGGGGAGGAAGAGCAGGCCGCATTCCCCATTAA

mRNA sequence

ATGGAAGCAGCTACACTTACCTCAGTCGCTCTTCGCTATTTATTCTTTGGTGTAATGATGTTTACTATCACAACGGCGATATTCGAAACCGCTGAACCGTTGACAACTTATGGCAACTATGAATCTCAAGTGAAGCAAGATGATGTTCGTTTGAAGGTCGAGTCGGAAGAAATTGTGGCAGAGGCAGACTACGGCCCCTGGAATCCAAACCCCATGTTTGGGGGAGGAAGAGCAGGCCGCATTCCCCATTAA

Coding sequence (CDS)

ATGGAAGCAGCTACACTTACCTCAGTCGCTCTTCGCTATTTATTCTTTGGTGTAATGATGTTTACTATCACAACGGCGATATTCGAAACCGCTGAACCGTTGACAACTTATGGCAACTATGAATCTCAAGTGAAGCAAGATGATGTTCGTTTGAAGGTCGAGTCGGAAGAAATTGTGGCAGAGGCAGACTACGGCCCCTGGAATCCAAACCCCATGTTTGGGGGAGGAAGAGCAGGCCGCATTCCCCATTAA

Protein sequence

MEAATLTSVALRYLFFGVMMFTITTAIFETAEPLTTYGNYESQVKQDDVRLKVESEEIVAEADYGPWNPNPMFGGGRAGRIPH
Homology
[Close]
BLAST of Bhi09M001888 vs. TrEMBL
Match: tr|A0A0A0L6C3|A0A0A0L6C3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006675 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-10
Identity = 40/65 (61.54%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 19 MMFTITTAIFETAEPLTTYGNYESQVKQDDVRLKVESEEIVAEADYGPWNPNPMFGGGRA 78
          MMFTI T I  T  P +TYGNYE QVK DD  LK +SE +    DY  W+PNP+FGGGRA
Sbjct: 1  MMFTIITTISVTNAP-STYGNYEYQVKGDDGHLKDDSEIV---TDYVDWSPNPIFGGGRA 60

Query: 79 GRIPH 84
          G IPH
Sbjct: 61 GLIPH 61

[Close]
BLAST of Bhi09M001888 vs. NCBI nr
Match: KGN55706.1 (hypothetical protein Csa_3G006675 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-10
Identity = 40/65 (61.54%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 19 MMFTITTAIFETAEPLTTYGNYESQVKQDDVRLKVESEEIVAEADYGPWNPNPMFGGGRA 78
          MMFTI T I  T  P +TYGNYE QVK DD  LK +SE +    DY  W+PNP+FGGGRA
Sbjct: 1  MMFTIITTISVTNAP-STYGNYEYQVKGDDGHLKDDSEIV---TDYVDWSPNPIFGGGRA 60

Query: 79 GRIPH 84
          G IPH
Sbjct: 61 GLIPH 61

The following BLAST results are available for this feature:
BLAST of Bhi09M001888 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi09M001888 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi09M001888 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L6C3|A0A0A0L6C3_CUCSA1.9e-1061.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006675 PE=4 SV=1[more]
BLAST of Bhi09M001888 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55706.12.8e-1061.54hypothetical protein Csa_3G006675 [Cucumis sativus][more]
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi09G001888Bhi09G001888gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi09M001888cds.Bhi09M001888CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi09M001888.exon1Bhi09M001888.exon1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi09M001888Bhi09M001888-proteinpolypeptide