Bhi09G000740 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09G000740
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Ankyrin repeat protein
Location	chr9 : 20219565 .. 20220136 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACAAAAGGCTTCAACCTCTTTCACACCCTTTTCTTAGTGCTTGCTTGGCAATCTTGTGGGAAGGTGGGTGCCACTTTCGATGACGTCACGGGTGGCGGAAAGCCCGCTCTCGATCGTCCATTCTCCTTCCGTACCTTTGGATCACATGGCACGCAAGCACCGGCGGTAGGACCAGTGAGCAGCGTCGGTGGAAAAGTTGTTGCTATTTCTCACCTGTCTCTTATACACATCTAGATGTGTATAAGAGACAGACTTTCAATGACGTCACAGGTGGCGTAAAGCCCGCTCTCGATCGTCCATTCTCCTTCCGTGCCTTTGGATCACATGGCACGCAAGCACCGGCGGTAGCACCAGTGAGCAGCGTCGGTGGAAAAGTTGTTGCTATTTCTCACGGTCATGAAATTAGCACGGCGAAAAGTACCGGTAGTGTTGTTTCTCAGGGAAGAAAAACTGGTCTGAACGGCAGCGGCAACAGTGGCAGTGTCGTTCCTATTTCTAATGGTCATGAAATTAGCAAGAGTAGTGGTAGTAGTGTTGTGGTTGCTCATGGTGGCAAACCGGTCTAA

mRNA sequence

ATGGCAACAAAAGGCTTCAACCTCTTTCACACCCTTTTCTTAGTGCTTGCTTGGCAATCTTGTGGGAAGGTGGGTGCCACTTTCGATGACGTCACGGGTGGCGGAAAGCCCGCTCTCGATCGTCCATTCTCCTTCCGTACCTTTGGATCACATGGCACGCAAGCACCGGCGGTAGGACCAGTGAGCAGCGTCGGTGGCGTAAAGCCCGCTCTCGATCGTCCATTCTCCTTCCGTGCCTTTGGATCACATGGCACGCAAGCACCGGCGGTAGCACCAGTGAGCAGCGTCGGTGGAAAAGTTGTTGCTATTTCTCACGGTCATGAAATTAGCACGGCGAAAAGTACCGGTAGTGTTGTTTCTCAGGGAAGAAAAACTGGTCTGAACGGCAGCGGCAACAGTGGCAGTGTCGTTCCTATTTCTAATGGTCATGAAATTAGCAAGAGTAGTGGTAGTAGTGTTGTGGTTGCTCATGGTGGCAAACCGGTCTAA

Coding sequence (CDS)

ATGGCAACAAAAGGCTTCAACCTCTTTCACACCCTTTTCTTAGTGCTTGCTTGGCAATCTTGTGGGAAGGTGGGTGCCACTTTCGATGACGTCACGGGTGGCGGAAAGCCCGCTCTCGATCGTCCATTCTCCTTCCGTACCTTTGGATCACATGGCACGCAAGCACCGGCGGTAGGACCAGTGAGCAGCGTCGGTGGCGTAAAGCCCGCTCTCGATCGTCCATTCTCCTTCCGTGCCTTTGGATCACATGGCACGCAAGCACCGGCGGTAGCACCAGTGAGCAGCGTCGGTGGAAAAGTTGTTGCTATTTCTCACGGTCATGAAATTAGCACGGCGAAAAGTACCGGTAGTGTTGTTTCTCAGGGAAGAAAAACTGGTCTGAACGGCAGCGGCAACAGTGGCAGTGTCGTTCCTATTTCTAATGGTCATGAAATTAGCAAGAGTAGTGGTAGTAGTGTTGTGGTTGCTCATGGTGGCAAACCGGTCTAA

Protein sequence

MATKGFNLFHTLFLVLAWQSCGKVGATFDDVTGGGKPALDRPFSFRTFGSHGTQAPAVGPVSSVGGVKPALDRPFSFRAFGSHGTQAPAVAPVSSVGGKVVAISHGHEISTAKSTGSVVSQGRKTGLNGSGNSGSVVPISNGHEISKSSGSSVVVAHGGKPV

Homology

[Close]

BLAST of Bhi09G000740 vs. TrEMBL
Match: tr|A0A0A0K662|A0A0A0K662_CUCSA (Ankyrin repeat protein OS=Cucumis sativus OX=3659 GN=Csa_7G398740 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21
Identity = 68/131 (51.91%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 1   MATKGFNLFHTLFLVLAWQSCGKVGATFDDVTGGGKPALDRPFSFRTFGSHGTQAPAVGP 60
           MA  GF LFHTLFLVLAWQ CGKVGATF DVTG  +PALDR    R FGSHGTQA AV P
Sbjct: 3   MAPNGFKLFHTLFLVLAWQCCGKVGATFGDVTGSVEPALDRKLPIRAFGSHGTQASAVAP 62

Query: 61  VSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHEISTAKSTGS-VV 120
           VSS                                          GHEISTAKS GS VV
Sbjct: 63  VSS--------------------------------VGGKVLVVSQGHEISTAKSAGSVVV 101

Query: 121 SQGRKTGLNGS 131
           S GRKTG N +
Sbjct: 123 SHGRKTGPNAN 101

[Close]

BLAST of Bhi09G000740 vs. TrEMBL
Match: tr|A0A0A0K5J0|A0A0A0K5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398750 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05
Identity = 29/46 (63.04%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 4  KGFNLFHTLFLVLAWQSCGKVGATFDDVTGGGKPALDRPFSFRTFG 50
          +GF LF TLFLV AWQ C KV ATF+DVTG     L+  FSFR FG
Sbjct: 3  RGFKLFQTLFLVFAWQHCVKVDATFNDVTGVVNLDLNHHFSFRGFG 48

[Close]

BLAST of Bhi09G000740 vs. TrEMBL
Match: tr|A0A0A0KB06|A0A0A0KB06_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404790 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.6e-04
Identity = 30/51 (58.82%), Postives = 33/51 (64.71%), Query Frame = 0


Query: 3  TKGFNLFHTLFLVLAWQSCGKVGATFDDVTGGGKPALDRPFSF-RTFGSHG 53
          T+GFNLFHTLFLVLA   C  VGATF DVTG     +   +SF  T GS G
Sbjct: 4  TQGFNLFHTLFLVLACLCCVNVGATFHDVTGILGLGIHHRYSFHNTIGSGG 54

[Close]

BLAST of Bhi09G000740 vs. TrEMBL
Match: tr|A0A0A0K7W7|A0A0A0K7W7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399280 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.6e-04
Identity = 26/47 (55.32%), Postives = 30/47 (63.83%), Query Frame = 0


Query: 4  KGFNLFHTLFLVLAWQ-SCGKVGATFDDVTGGGKPALDRPFSFRTFG 50
          +GF LF TL LV AW+  C +VGATF D TG     L+  FSFR FG
Sbjct: 5  RGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFG 51

[Close]

BLAST of Bhi09G000740 vs. NCBI nr
Match: KGN44963.1 (Ankyrin repeat protein [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 2.4e-21
Identity = 68/131 (51.91%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 1   MATKGFNLFHTLFLVLAWQSCGKVGATFDDVTGGGKPALDRPFSFRTFGSHGTQAPAVGP 60
           MA  GF LFHTLFLVLAWQ CGKVGATF DVTG  +PALDR    R FGSHGTQA AV P
Sbjct: 3   MAPNGFKLFHTLFLVLAWQCCGKVGATFGDVTGSVEPALDRKLPIRAFGSHGTQASAVAP 62

Query: 61  VSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHEISTAKSTGS-VV 120
           VSS                                          GHEISTAKS GS VV
Sbjct: 63  VSS--------------------------------VGGKVLVVSQGHEISTAKSAGSVVV 101

Query: 121 SQGRKTGLNGS 131
           S GRKTG N +
Sbjct: 123 SHGRKTGPNAN 101

[Close]

BLAST of Bhi09G000740 vs. NCBI nr
Match: XP_022925496.1 (uncharacterized protein LOC111432782 isoform X1 [Cucurbita moschata] >XP_022925497.1 uncharacterized protein LOC111432782 isoform X2 [Cucurbita moschata])

HSP 1 Score: 85.1 bits (209), Expect = 2.4e-13
Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 0


Query: 4  KGFNLFHTLFLVLAWQSCGKVGATFDDVTGGGKPALDRPFSFRTFGSHGTQAPAVGPVSS 63
          KGF LFHTLFLV+AWQ C KVGAT+ DVTG  K  LD  FSFR FGSH TQ PA+ P++S
Sbjct: 5  KGFKLFHTLFLVVAWQYCVKVGATYGDVTGVVK--LDHQFSFRAFGSHDTQTPAIAPIAS 62

[Close]

BLAST of Bhi09G000740 vs. NCBI nr
Match: XP_022930153.1 (mucin-1-like [Cucurbita moschata])

HSP 1 Score: 84.7 bits (208), Expect = 3.1e-13
Identity = 41/60 (68.33%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 4  KGFNLFHTLFLVLAWQSCGKVGATFDDVTGGGKPALDRPFSFRTFGSHGTQAPAVGPVSS 63
          KGF LFHTLFLV++WQ C KVGATF DVT  G   LD  FSFR F SH TQAPAV P+ S
Sbjct: 5  KGFKLFHTLFLVISWQYCAKVGATFSDVT--GVVNLDHQFSFRAFASHDTQAPAVAPIGS 62

[Close]

BLAST of Bhi09G000740 vs. NCBI nr
Match: XP_023520818.1 (sialidase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 83.6 bits (205), Expect = 6.9e-13
Identity = 40/60 (66.67%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 4  KGFNLFHTLFLVLAWQSCGKVGATFDDVTGGGKPALDRPFSFRTFGSHGTQAPAVGPVSS 63
          KGF LFHTLFLV++WQ C KVGATF DVT  G   LD  FSFR F SH TQAPA+ P+ S
Sbjct: 5  KGFKLFHTLFLVISWQYCAKVGATFSDVT--GVVNLDHKFSFRAFASHDTQAPALAPIGS 62

[Close]

BLAST of Bhi09G000740 vs. NCBI nr
Match: XP_022930158.1 (protein FAM186A-like [Cucurbita moschata])

HSP 1 Score: 83.2 bits (204), Expect = 9.0e-13
Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 4  KGFNLFHTLFLVLAWQSCGKVGATFDDVTGGGKPALDRPFSFRTFGSHGTQAPAVGPV 62
          KGF LFHTLFLV++WQ C KVGATF DVT  G   LD  FSFR F SH TQAPAV P+
Sbjct: 5  KGFKLFHTLFLVISWQYCAKVGATFSDVT--GVVNLDHQFSFRAFASHDTQAPAVAPI 60

The following BLAST results are available for this feature:

BLAST of Bhi09G000740 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi09G000740 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi09G000740 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K662\|A0A0A0K662_CUCSA	1.6e-21	51.91	Ankyrin repeat protein OS=Cucumis sativus OX=3659 GN=Csa_7G398740 PE=4 SV=1	[more]
tr\|A0A0A0K5J0\|A0A0A0K5J0_CUCSA	1.2e-05	63.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398750 PE=4 SV=1	[more]
tr\|A0A0A0KB06\|A0A0A0KB06_CUCSA	6.6e-04	58.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404790 PE=4 SV=1	[more]
tr\|A0A0A0K7W7\|A0A0A0K7W7_CUCSA	8.6e-04	55.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399280 PE=4 SV=1	[more]

BLAST of Bhi09G000740 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44963.1	2.4e-21	51.91	Ankyrin repeat protein [Cucumis sativus]	[more]
XP_022925496.1	2.4e-13	68.33	uncharacterized protein LOC111432782 isoform X1 [Cucurbita moschata] >XP_0229254...	[more]
XP_022930153.1	3.1e-13	68.33	mucin-1-like [Cucurbita moschata]	[more]
XP_023520818.1	6.9e-13	66.67	sialidase-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930158.1	9.0e-13	68.97	protein FAM186A-like [Cucurbita moschata]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000740	Bhi09M000740	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..162
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..21 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi09G000740	Csa7G398740	Cucumber (Chinese Long) v2	cuwgoB691
Bhi09G000740	MELO3C015979	Melon (DHL92) v3.5.1	mewgoB254
Bhi09G000740	ClCG09G005750	Watermelon (Charleston Gray)	wcgwgoB067
Bhi09G000740	CmaCh08G004340	Cucurbita maxima (Rimu)	cmawgoB1119
Bhi09G000740	CsGy7G016120	Cucumber (Gy14) v2	cgybwgoB660
Bhi09G000740	MELO3C015979.2	Melon (DHL92) v3.6.1	medwgoB255
Bhi09G000740	CsaV3_7G029480	Cucumber (Chinese Long) v3	cucwgoB716
Bhi09G000740	Cla015080	Watermelon (97103) v1	wgowmB584
Bhi09G000740	Cla97C09G168240	Watermelon (97103) v2	wgowmbB613

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi09G000740	Cucurbita moschata (Rifu)	cmowgoB0493
Bhi09G000740	Cucurbita moschata (Rifu)	cmowgoB1118
Bhi09G000740	Cucurbita pepo (Zucchini)	cpewgoB0210
Bhi09G000740	Cucurbita pepo (Zucchini)	cpewgoB0420
Bhi09G000740	Wild cucumber (PI 183967)	cpiwgoB703
Bhi09G000740	Bottle gourd (USVL1VR-Ls)	lsiwgoB271
Bhi09G000740	Watermelon (Charleston Gray)	wcgwgoB069
Bhi09G000740	Watermelon (97103) v2	wgowmbB615
Bhi09G000740	Watermelon (97103) v1	wgowmB586
Bhi09G000740	Silver-seed gourd	carwgoB0133
Bhi09G000740	Cucumber (Gy14) v1	cgywgoB432
Bhi09G000740	Cucurbita maxima (Rimu)	cmawgoB0494