Bhi09G000726 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09G000726
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr9 : 19961374 .. 19961790 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGGCAAGAGGTTTCAAGCTCTTCCACACCCTTTTCTTAGTGTTTGCTTGGCAATATTTTGCCAAGGTGGGTGCCACTTTTACTTTCGATGACGTTACTGGCTTTATTGAACGTAATTTCGACTTCGGTTCATTTGGATCAGGTGGTGTTGGAATTCTTCAGAACAAGAAGAGTAGCATTGCAACAAATATAGAAATGACGAACCCTCCAGAATTGGCTCCTGGTATCGCCCCTGTCGGGCTTGGAATACCAATGAACGAAGGCGATGAAGCTTCGTCGTTTGGTTTTGAAACTATTAAGAAGATCAATGGTGGAGTTGTTGTTTCTAATGATCACAAAATTAATTTGAAGAGTGGCTGCAACATTGCTGTTTCTCATGGTGGAATAATTAGTCGAAAGATGAAATACTAA

mRNA sequence

ATGGCTATGGCAAGAGGTTTCAAGCTCTTCCACACCCTTTTCTTAGTGTTTGCTTGGCAATATTTTGCCAAGGTGGGTGCCACTTTTACTTTCGATGACGTTACTGGCTTTATTGAACGTAATTTCGACTTCGGTTCATTTGGATCAGGTGGTGTTGGAATTCTTCAGAACAAGAAGAGTAGCATTGCAACAAATATAGAAATGACGAACCCTCCAGAATTGGCTCCTGGTATCGCCCCTGTCGGGCTTGGAATACCAATGAACGAAGGCGATGAAGCTTCGTCGTTTGGTTTTGAAACTATTAAGAAGATCAATGGTGGAGTTGTTGTTTCTAATGATCACAAAATTAATTTGAAGAGTGGCTGCAACATTGCTGTTTCTCATGGTGGAATAATTAGTCGAAAGATGAAATACTAA

Coding sequence (CDS)

ATGGCTATGGCAAGAGGTTTCAAGCTCTTCCACACCCTTTTCTTAGTGTTTGCTTGGCAATATTTTGCCAAGGTGGGTGCCACTTTTACTTTCGATGACGTTACTGGCTTTATTGAACGTAATTTCGACTTCGGTTCATTTGGATCAGGTGGTGTTGGAATTCTTCAGAACAAGAAGAGTAGCATTGCAACAAATATAGAAATGACGAACCCTCCAGAATTGGCTCCTGGTATCGCCCCTGTCGGGCTTGGAATACCAATGAACGAAGGCGATGAAGCTTCGTCGTTTGGTTTTGAAACTATTAAGAAGATCAATGGTGGAGTTGTTGTTTCTAATGATCACAAAATTAATTTGAAGAGTGGCTGCAACATTGCTGTTTCTCATGGTGGAATAATTAGTCGAAAGATGAAATACTAA

Protein sequence

MAMARGFKLFHTLFLVFAWQYFAKVGATFTFDDVTGFIERNFDFGSFGSGGVGILQNKKSSIATNIEMTNPPELAPGIAPVGLGIPMNEGDEASSFGFETIKKINGGVVVSNDHKINLKSGCNIAVSHGGIISRKMKY

Homology

[Close]

BLAST of Bhi09G000726 vs. TrEMBL
Match: tr|A0A0A0K5J0|A0A0A0K5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398750 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-22
Identity = 68/125 (54.40%), Postives = 82/125 (65.60%), Query Frame = 0


Query: 3   MARGFKLFHTLFLVFAWQYFAKVGATFTFDDVTGFI----ERNFDFGSFGSGGVGILQNK 62
           MARGFKLF TLFLVFAWQ+  KV A  TF+DVTG +      +F F  FG   +G   N 
Sbjct: 1   MARGFKLFQTLFLVFAWQHCVKVDA--TFNDVTGVVNLDLNHHFSFRGFGWPRIG-TPNT 60

Query: 63  KSSIATNIEMTNPPELAPGIAPVGLGIPMNEGDEASSFGFETIKKINGGVVVSNDHKINL 122
             S+A+ +   N  E   GIAPVGL  P+N+GD+ S+FG E IK+I  GVVVS DH+INL
Sbjct: 61  DGSLASTV--NNHAEAPTGIAPVGLDTPINKGDKVSTFGLEIIKQIESGVVVSKDHEINL 120

Query: 123 KSGCN 124
           KSG N
Sbjct: 121 KSGGN 120

[Close]

BLAST of Bhi09G000726 vs. TrEMBL
Match: tr|A0A0A0K5G8|A0A0A0K5G8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398120 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 8.6e-21
Identity = 67/121 (55.37%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 1   MAMARGFKLFHTLFLVFAWQYFAKVGATFTFDDVTGFIERNFDFGSFGSGGVGILQNKKS 60
           M++A G KLFHT+ L+ AWQY AKV A  TF DVTGF +  F+ GSFGSGG GI+   K+
Sbjct: 1   MSIAIGSKLFHTVLLMLAWQYCAKVDA--TFKDVTGFFD--FNLGSFGSGGAGIMGGTKN 60

Query: 61  SIATNIEMTNPPELAPGIAPVGLGIPMNEGDE-ASSFGFETIKKINGGVVVSND-HKINL 120
             +      N PE+APGIAPVG   P N  D  ASSF F+  K INGGV +SN  HK+NL
Sbjct: 61  GGSP----ANAPEMAPGIAPVGFDTPTNNEDSGASSFDFDFSKNINGGVDLSNGAHKLNL 113

[Close]

BLAST of Bhi09G000726 vs. TrEMBL
Match: tr|A0A0A0K7W7|A0A0A0K7W7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399280 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.6e-19
Identity = 68/143 (47.55%), Postives = 87/143 (60.84%), Query Frame = 0


Query: 1   MAMARGFKLFHTLFLVFAWQY-FAKVGATFTFDDVTGFI----ERNFDFGSFGSGGVGIL 60
           M MARGFKLF TL LVFAW+Y  A+VGATF+  D TG +       F F +FG   +G  
Sbjct: 1   MEMARGFKLFQTLCLVFAWKYCCAQVGATFS--DATGVVNAGLNHQFSFRAFGWPHIG-T 60

Query: 61  QNKKSSIATNIEMTNPPELAPGIAPVGLGIPMNEGDEASSFGFETIKKI-NGGVVVSNDH 120
            +   SI + ++     E   GIAPVGL   +N+ D+  S+  + IK+I  GG VVS+DH
Sbjct: 61  PDVDGSITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDH 120

Query: 121 KINLKSGCNIAVSHGGIISRKMK 138
           + NL SG NIA SHGG +S K K
Sbjct: 121 ESNLNSGENIAFSHGGKVSVKSK 140

[Close]

BLAST of Bhi09G000726 vs. TrEMBL
Match: tr|A0A0A0K668|A0A0A0K668_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399270 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.5e-14
Identity = 64/141 (45.39%), Postives = 78/141 (55.32%), Query Frame = 0


Query: 1   MAMARGFKLFHTLFLVFAWQYFAKVGATFTFDDVTGFIERNFDFGSFGSGGVGILQNKKS 60
           MA+AR FKL  TLFLVF WQY AKVGA+  FDD        FD GSFGS GVG+L  K  
Sbjct: 1   MAVARCFKLLPTLFLVFVWQYCAKVGASGFFDD--------FDSGSFGSSGVGMLVIKNR 60

Query: 61  SIATNIEMTNPPELAPGIA-PVGLGIPMNEGDEASSFGFE-TIKKINGGVVVSNDH-KIN 120
            +A N  M +P ELAP    P+      N+ ++ SS   + T      G  VS D  K N
Sbjct: 61  GVAPNSNMIDPKELAPETTRPIETKTTQNKDNKDSSSNIKITANNRKIGTTVSYDRIKTN 120

Query: 121 LKSGCNIAV-SHGGIISRKMK 138
           +K G NI +  HG II  K++
Sbjct: 121 MKIGGNIDLFDHGRIIIPKIQ 133

[Close]

BLAST of Bhi09G000726 vs. TrEMBL
Match: tr|A0A0A0KAZ8|A0A0A0KAZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398760 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.1e-11
Identity = 49/113 (43.36%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 30  TFDDVTGFI----ERNFDFGSFGSGGVGILQNKKSSIATNIEMTNPPELAPGIAPVGLGI 89
           TF D TG +       F F +FG   +G   N   SI + +E     E   GIAPVGL  
Sbjct: 8   TFSDATGVVNAGLNHQFSFRAFGWPHIG-TPNVDGSITSTVEKQIRAEAPAGIAPVGLET 67

Query: 90  PMNEGDEASSFGFETIKKI-NGGVVVSNDHKINLKSGCNIAVSHGGIISRKMK 138
            +N+ D+  S+  + IK+I  GG VVS+DH+ NL SG NIA SHGG +S K K
Sbjct: 68  MINKEDKVQSYDLDIIKQIKGGGAVVSHDHESNLNSGENIAFSHGGKVSVKSK 119

[Close]

BLAST of Bhi09G000726 vs. NCBI nr
Match: KGN44965.1 (hypothetical protein Csa_7G398750 [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 2.4e-22
Identity = 68/125 (54.40%), Postives = 82/125 (65.60%), Query Frame = 0


Query: 3   MARGFKLFHTLFLVFAWQYFAKVGATFTFDDVTGFI----ERNFDFGSFGSGGVGILQNK 62
           MARGFKLF TLFLVFAWQ+  KV A  TF+DVTG +      +F F  FG   +G   N 
Sbjct: 1   MARGFKLFQTLFLVFAWQHCVKVDA--TFNDVTGVVNLDLNHHFSFRGFGWPRIG-TPNT 60

Query: 63  KSSIATNIEMTNPPELAPGIAPVGLGIPMNEGDEASSFGFETIKKINGGVVVSNDHKINL 122
             S+A+ +   N  E   GIAPVGL  P+N+GD+ S+FG E IK+I  GVVVS DH+INL
Sbjct: 61  DGSLASTV--NNHAEAPTGIAPVGLDTPINKGDKVSTFGLEIIKQIESGVVVSKDHEINL 120

Query: 123 KSGCN 124
           KSG N
Sbjct: 121 KSGGN 120

[Close]

BLAST of Bhi09G000726 vs. NCBI nr
Match: KGN44950.1 (hypothetical protein Csa_7G398120 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 67/121 (55.37%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 1   MAMARGFKLFHTLFLVFAWQYFAKVGATFTFDDVTGFIERNFDFGSFGSGGVGILQNKKS 60
           M++A G KLFHT+ L+ AWQY AKV A  TF DVTGF +  F+ GSFGSGG GI+   K+
Sbjct: 1   MSIAIGSKLFHTVLLMLAWQYCAKVDA--TFKDVTGFFD--FNLGSFGSGGAGIMGGTKN 60

Query: 61  SIATNIEMTNPPELAPGIAPVGLGIPMNEGDE-ASSFGFETIKKINGGVVVSND-HKINL 120
             +      N PE+APGIAPVG   P N  D  ASSF F+  K INGGV +SN  HK+NL
Sbjct: 61  GGSP----ANAPEMAPGIAPVGFDTPTNNEDSGASSFDFDFSKNINGGVDLSNGAHKLNL 113

[Close]

BLAST of Bhi09G000726 vs. NCBI nr
Match: XP_011659777.1 (PREDICTED: keratin, type I cytoskeletal 9-like [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 67/121 (55.37%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 1   MAMARGFKLFHTLFLVFAWQYFAKVGATFTFDDVTGFIERNFDFGSFGSGGVGILQNKKS 60
           M++A G KLFHT+ L+ AWQY AKV A  TF DVTGF +  F+ GSFGSGG GI+   K+
Sbjct: 1   MSIAIGSKLFHTVLLMLAWQYCAKVDA--TFKDVTGFFD--FNLGSFGSGGAGIMGGTKN 60

Query: 61  SIATNIEMTNPPELAPGIAPVGLGIPMNEGDE-ASSFGFETIKKINGGVVVSND-HKINL 120
             +      N PE+APGIAPVG   P N  D  ASSF F+  K INGGV +SN  HK+NL
Sbjct: 61  GGSP----ANAPEMAPGIAPVGFDTPTNNEDSGASSFDFDFSKNINGGVDLSNGAHKLNL 113

[Close]

BLAST of Bhi09G000726 vs. NCBI nr
Match: KGN44969.1 (hypothetical protein Csa_7G399280 [Cucumis sativus])

HSP 1 Score: 103.6 bits (257), Expect = 5.5e-19
Identity = 68/143 (47.55%), Postives = 87/143 (60.84%), Query Frame = 0


Query: 1   MAMARGFKLFHTLFLVFAWQY-FAKVGATFTFDDVTGFI----ERNFDFGSFGSGGVGIL 60
           M MARGFKLF TL LVFAW+Y  A+VGATF+  D TG +       F F +FG   +G  
Sbjct: 1   MEMARGFKLFQTLCLVFAWKYCCAQVGATFS--DATGVVNAGLNHQFSFRAFGWPHIG-T 60

Query: 61  QNKKSSIATNIEMTNPPELAPGIAPVGLGIPMNEGDEASSFGFETIKKI-NGGVVVSNDH 120
            +   SI + ++     E   GIAPVGL   +N+ D+  S+  + IK+I  GG VVS+DH
Sbjct: 61  PDVDGSITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDH 120

Query: 121 KINLKSGCNIAVSHGGIISRKMK 138
           + NL SG NIA SHGG +S K K
Sbjct: 121 ESNLNSGENIAFSHGGKVSVKSK 140

[Close]

BLAST of Bhi09G000726 vs. NCBI nr
Match: KGN44968.1 (hypothetical protein Csa_7G399270 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 5.3e-14
Identity = 64/141 (45.39%), Postives = 78/141 (55.32%), Query Frame = 0


Query: 1   MAMARGFKLFHTLFLVFAWQYFAKVGATFTFDDVTGFIERNFDFGSFGSGGVGILQNKKS 60
           MA+AR FKL  TLFLVF WQY AKVGA+  FDD        FD GSFGS GVG+L  K  
Sbjct: 1   MAVARCFKLLPTLFLVFVWQYCAKVGASGFFDD--------FDSGSFGSSGVGMLVIKNR 60

Query: 61  SIATNIEMTNPPELAPGIA-PVGLGIPMNEGDEASSFGFE-TIKKINGGVVVSNDH-KIN 120
            +A N  M +P ELAP    P+      N+ ++ SS   + T      G  VS D  K N
Sbjct: 61  GVAPNSNMIDPKELAPETTRPIETKTTQNKDNKDSSSNIKITANNRKIGTTVSYDRIKTN 120

Query: 121 LKSGCNIAV-SHGGIISRKMK 138
           +K G NI +  HG II  K++
Sbjct: 121 MKIGGNIDLFDHGRIIIPKIQ 133

The following BLAST results are available for this feature:

BLAST of Bhi09G000726 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi09G000726 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi09G000726 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K5J0\|A0A0A0K5J0_CUCSA	1.6e-22	54.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398750 PE=4 SV=1	[more]
tr\|A0A0A0K5G8\|A0A0A0K5G8_CUCSA	8.6e-21	55.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398120 PE=4 SV=1	[more]
tr\|A0A0A0K7W7\|A0A0A0K7W7_CUCSA	3.6e-19	47.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399280 PE=4 SV=1	[more]
tr\|A0A0A0K668\|A0A0A0K668_CUCSA	3.5e-14	45.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399270 PE=4 SV=1	[more]
tr\|A0A0A0KAZ8\|A0A0A0KAZ8_CUCSA	2.1e-11	43.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398760 PE=4 SV=1	[more]

BLAST of Bhi09G000726 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44965.1	2.4e-22	54.40	hypothetical protein Csa_7G398750 [Cucumis sativus]	[more]
KGN44950.1	1.3e-20	55.37	hypothetical protein Csa_7G398120 [Cucumis sativus]	[more]
XP_011659777.1	1.3e-20	55.37	PREDICTED: keratin, type I cytoskeletal 9-like [Cucumis sativus]	[more]
KGN44969.1	5.5e-19	47.55	hypothetical protein Csa_7G399280 [Cucumis sativus]	[more]
KGN44968.1	5.3e-14	45.39	hypothetical protein Csa_7G399270 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005882	intermediate filament
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005198	structural molecule activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000726	Bhi09M000726	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi09G000726	Csa7G398120	Cucumber (Chinese Long) v2	cuwgoB691
Bhi09G000726	MELO3C015990	Melon (DHL92) v3.5.1	mewgoB254
Bhi09G000726	ClCG09G005790	Watermelon (Charleston Gray)	wcgwgoB069
Bhi09G000726	CSPI07G17570	Wild cucumber (PI 183967)	cpiwgoB703
Bhi09G000726	MELO3C015990.2	Melon (DHL92) v3.6.1	medwgoB255
Bhi09G000726	CsaV3_7G029360	Cucumber (Chinese Long) v3	cucwgoB716
Bhi09G000726	Cla015089	Watermelon (97103) v1	wgowmB584
Bhi09G000726	Cla015076	Watermelon (97103) v1	wgowmB586
Bhi09G000726	Cla97C09G168160	Watermelon (97103) v2	wgowmbB613

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi09G000726	Cucumber (Gy14) v1	cgywgoB432
Bhi09G000726	Cucumber (Gy14) v2	cgybwgoB660
Bhi09G000726	Cucurbita maxima (Rimu)	cmawgoB0494
Bhi09G000726	Cucurbita maxima (Rimu)	cmawgoB1119
Bhi09G000726	Cucurbita moschata (Rifu)	cmowgoB0493
Bhi09G000726	Cucurbita moschata (Rifu)	cmowgoB1118
Bhi09G000726	Cucurbita pepo (Zucchini)	cpewgoB0210
Bhi09G000726	Cucurbita pepo (Zucchini)	cpewgoB0420
Bhi09G000726	Bottle gourd (USVL1VR-Ls)	lsiwgoB271
Bhi09G000726	Watermelon (Charleston Gray)	wcgwgoB067
Bhi09G000726	Watermelon (97103) v2	wgowmbB615
Bhi09G000726	Silver-seed gourd	carwgoB0133
Bhi09G000726	Silver-seed gourd	carwgoB0673