Bhi09G000701 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09G000701
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr9 : 19178543 .. 19178929 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTACATCCCACAAAATGAGTCACCAGCGGCCGATTTTCCCCAATCATCTCCTCGAATTTGTCAACCAAATTCCCCCAATACCCATGAAGATTATACGAATTCTCTAAATAGATCTTGTTTCCCCATTTCTCCCTTTGTGTTGCCAGAAGGTAAACCATGGCGGATTGATCATCTGCTTCAAAGATTGGCCTGTCTTTCAGCTCTTTTGTCAGGATTTTCCCTGCTTCGTCTCGGATTTTCCCTCTTGGCCCCATCGGAGCCCACGCATCGAGAATGTCGAGCGACCATTGGCAGTTTCTCATCAAGAAACTCCCTGTATTCAACCCAACCCAGCTTCTTTGATCATACACCATCTCCTTCCATCCATGCATTACGAAATTGA

mRNA sequence

ATGGTTTACATCCCACAAAATGAGTCACCAGCGGCCGATTTTCCCCAATCATCTCCTCGAATTTGTCAACCAAATTCCCCCAATACCCATGAAGATTATACGAATTCTCTAAATAGATCTTGTTTCCCCATTTCTCCCTTTGTGTTGCCAGAAGGTAAACCATGGCGGATTGATCATCTGCTTCAAAGATTGGCCTGTCTTTCAGCTCTTTTGTCAGGATTTTCCCTGCTTCGTCTCGGATTTTCCCTCTTGGCCCCATCGGAGCCCACGCATCGAGAATGTCGAGCGACCATTGGCAGTTTCTCATCAAGAAACTCCCTGTATTCAACCCAACCCAGCTTCTTTGATCATACACCATCTCCTTCCATCCATGCATTACGAAATTGA

Coding sequence (CDS)

ATGGTTTACATCCCACAAAATGAGTCACCAGCGGCCGATTTTCCCCAATCATCTCCTCGAATTTGTCAACCAAATTCCCCCAATACCCATGAAGATTATACGAATTCTCTAAATAGATCTTGTTTCCCCATTTCTCCCTTTGTGTTGCCAGAAGGTAAACCATGGCGGATTGATCATCTGCTTCAAAGATTGGCCTGTCTTTCAGCTCTTTTGTCAGGATTTTCCCTGCTTCGTCTCGGATTTTCCCTCTTGGCCCCATCGGAGCCCACGCATCGAGAATGTCGAGCGACCATTGGCAGTTTCTCATCAAGAAACTCCCTGTATTCAACCCAACCCAGCTTCTTTGATCATACACCATCTCCTTCCATCCATGCATTACGAAATTGA

Protein sequence

MVYIPQNESPAADFPQSSPRICQPNSPNTHEDYTNSLNRSCFPISPFVLPEGKPWRIDHLLQRLACLSALLSGFSLLRLGFSLLAPSEPTHRECRATIGSFSSRNSLYSTQPSFFDHTPSPSIHALRN

Homology

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BLAST of Bhi09G000701 vs. TrEMBL
Match: tr|A0A0A0K615|A0A0A0K615_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396385 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.8e-50
Identity = 103/126 (81.75%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MVYIPQNESPAADFPQSSPRICQPNSPNTHEDYTNSLNRSCFPISPFVLPEGKPWRIDHL 60
           MVY PQNESP A+FP  SPRICQP SPNTHEDY NSLNR CFPISPFVLPE KPW+IDHL
Sbjct: 1   MVYTPQNESPMANFPLPSPRICQPKSPNTHEDYRNSLNRFCFPISPFVLPEDKPWQIDHL 60

Query: 61  LQRLACLSALLSGFSLLRLGFSLLAPSEPTHRECRATIGSFSSRNSLYSTQPSFFDHTPS 120
           LQRLACLSA   GFS L LGFSL APSEPT RECRATIGSFSSRNSLY    SFFDHTPS
Sbjct: 61  LQRLACLSARSLGFSPLHLGFSLSAPSEPTRRECRATIGSFSSRNSLYLILSSFFDHTPS 120

Query: 121 PSIHAL 127
            S HAL
Sbjct: 121 LSNHAL 126

[Close]

BLAST of Bhi09G000701 vs. NCBI nr
Match: KGN44923.1 (hypothetical protein Csa_7G396385 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 4.3e-50
Identity = 103/126 (81.75%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MVYIPQNESPAADFPQSSPRICQPNSPNTHEDYTNSLNRSCFPISPFVLPEGKPWRIDHL 60
           MVY PQNESP A+FP  SPRICQP SPNTHEDY NSLNR CFPISPFVLPE KPW+IDHL
Sbjct: 1   MVYTPQNESPMANFPLPSPRICQPKSPNTHEDYRNSLNRFCFPISPFVLPEDKPWQIDHL 60

Query: 61  LQRLACLSALLSGFSLLRLGFSLLAPSEPTHRECRATIGSFSSRNSLYSTQPSFFDHTPS 120
           LQRLACLSA   GFS L LGFSL APSEPT RECRATIGSFSSRNSLY    SFFDHTPS
Sbjct: 61  LQRLACLSARSLGFSPLHLGFSLSAPSEPTRRECRATIGSFSSRNSLYLILSSFFDHTPS 120

Query: 121 PSIHAL 127
            S HAL
Sbjct: 121 LSNHAL 126

The following BLAST results are available for this feature:

BLAST of Bhi09G000701 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi09G000701 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi09G000701 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K615\|A0A0A0K615_CUCSA	2.8e-50	81.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396385 PE=4 SV=1	[more]

BLAST of Bhi09G000701 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44923.1	4.3e-50	81.75	hypothetical protein Csa_7G396385 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000701	Bhi09M000701	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi09G000701	CSPI07G17320	Wild cucumber (PI 183967)	cpiwgoB703

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi09G000701	Cucumber (Gy14) v1	cgywgoB432
Bhi09G000701	Cucumber (Gy14) v2	cgybwgoB660
Bhi09G000701	Cucurbita maxima (Rimu)	cmawgoB0494
Bhi09G000701	Cucurbita maxima (Rimu)	cmawgoB1119
Bhi09G000701	Cucurbita maxima (Rimu)	cmawgoB1127
Bhi09G000701	Cucurbita moschata (Rifu)	cmowgoB0493
Bhi09G000701	Cucurbita moschata (Rifu)	cmowgoB1118
Bhi09G000701	Cucurbita pepo (Zucchini)	cpewgoB0210
Bhi09G000701	Cucurbita pepo (Zucchini)	cpewgoB0420
Bhi09G000701	Cucurbita pepo (Zucchini)	cpewgoB0819
Bhi09G000701	Cucumber (Chinese Long) v3	cucwgoB716
Bhi09G000701	Cucumber (Chinese Long) v2	cuwgoB691
Bhi09G000701	Bottle gourd (USVL1VR-Ls)	lsiwgoB271
Bhi09G000701	Melon (DHL92) v3.6.1	medwgoB255
Bhi09G000701	Melon (DHL92) v3.5.1	mewgoB254
Bhi09G000701	Watermelon (Charleston Gray)	wcgwgoB069
Bhi09G000701	Watermelon (97103) v2	wgowmbB615
Bhi09G000701	Watermelon (97103) v1	wgowmB586
Bhi09G000701	Silver-seed gourd	carwgoB0133
Bhi09G000701	Silver-seed gourd	carwgoB0953