CSPI07G17320 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G17320
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 15731732 .. 15732362 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATTAAACGCTCTCTCCATTGCTTTCAAGCATTTCTCAACAGGGTAATCCCCAGCTTTCCCACATGGTTTACACCCCACAAAATGAGTCACCAATGGCCAATTTTCCCTTACCGTCTCCTCGAATTTGTCAACCAAAATCCCCCAATACCCATGAAGATTATAGGAATTCTCTAAATAGATTTTGCTTCCCCATTTCTCCCTTTGTGTTGCCAGAAGATAAGCCATGGCAGATTGATCATCTGCTTCAAAGGTTGGCCTGTCTTTCAGCTCGTTCGTTAGGATTTTCCCTGCTTCATCTCGGGTTTTCCCTTTCGGCCCCATCGGAGCCCACGCGTCGAGAATGTCGAGCGACCATTGGCAGTTTCTCATCAAGAAACTCCCTGTATTTAATCCTATCCAGCTTCTTTGATCATACACCATCTCTTTCCAACCATGCATTATGAAATTGAAGTCTTTATACTTATCCCATGGGATTTCAAACGACATGTCGGTGAACATGGCGTCACTATCCATCCACCATATGAATTCTACTTCCGGATGCGAGAGAAGAAGCTTCCGTATCAATGGAAGCTTCCCCCAGAATCCCGTCATTTCCTCATCCAGAATCGCTAAGTTGTAGAAAATCTCG

mRNA sequence

ATGGTTTACACCCCACAAAATGAGTCACCAATGGCCAATTTTCCCTTACCGTCTCCTCGAATTTGTCAACCAAAATCCCCCAATACCCATGAAGATTATAGGAATTCTCTAAATAGATTTTGCTTCCCCATTTCTCCCTTTGTGTTGCCAGAAGATAAGCCATGGCAGATTGATCATCTGCTTCAAAGGTTGGCCTGTCTTTCAGCTCGTTCGTTAGGATTTTCCCTGCTTCATCTCGGGTTTTCCCTTTCGGCCCCATCGGAGCCCACGCGTCGAGAATGTCGAGCGACCATTGGCAGTTTCTCATCAAGAAACTCCCTGTATTTAATCCTATCCAGCTTCTTTGATCATACACCATCTCTTTCCAACCATGCATTATGA

Coding sequence (CDS)

ATGGTTTACACCCCACAAAATGAGTCACCAATGGCCAATTTTCCCTTACCGTCTCCTCGAATTTGTCAACCAAAATCCCCCAATACCCATGAAGATTATAGGAATTCTCTAAATAGATTTTGCTTCCCCATTTCTCCCTTTGTGTTGCCAGAAGATAAGCCATGGCAGATTGATCATCTGCTTCAAAGGTTGGCCTGTCTTTCAGCTCGTTCGTTAGGATTTTCCCTGCTTCATCTCGGGTTTTCCCTTTCGGCCCCATCGGAGCCCACGCGTCGAGAATGTCGAGCGACCATTGGCAGTTTCTCATCAAGAAACTCCCTGTATTTAATCCTATCCAGCTTCTTTGATCATACACCATCTCTTTCCAACCATGCATTATGA
Homology
[Close]
BLAST of CSPI07G17320 vs. TrEMBL
Match: A0A0A0K615_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396385 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 5.2e-67
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 1 

Query: 1   MVYTPQNESPMANFPLPSPRICQPKSPNTHEDYRNSLNRFCFPISPFVLPEDKPWQIDHL 60
           MVYTPQNESPMANFPLPSPRICQPKSPNTHEDYRNSLNRFCFPISPFVLPEDKPWQIDHL
Sbjct: 1   MVYTPQNESPMANFPLPSPRICQPKSPNTHEDYRNSLNRFCFPISPFVLPEDKPWQIDHL 60

Query: 61  LQRLACLSARSLGFSLLHLGFSLSAPSEPTRRECRATIGSFSSRNSLYLILSSFFDHTPS 120
           LQRLACLSARSLGFS LHLGFSLSAPSEPTRRECRATIGSFSSRNSLYLILSSFFDHTPS
Sbjct: 61  LQRLACLSARSLGFSPLHLGFSLSAPSEPTRRECRATIGSFSSRNSLYLILSSFFDHTPS 120

Query: 121 LSNHAL 127
           LSNHAL
Sbjct: 121 LSNHAL 126

[Close]
BLAST of CSPI07G17320 vs. NCBI nr
Match: gi|700189690|gb|KGN44923.1| (hypothetical protein Csa_7G396385 [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 7.4e-67
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 1 

Query: 1   MVYTPQNESPMANFPLPSPRICQPKSPNTHEDYRNSLNRFCFPISPFVLPEDKPWQIDHL 60
           MVYTPQNESPMANFPLPSPRICQPKSPNTHEDYRNSLNRFCFPISPFVLPEDKPWQIDHL
Sbjct: 1   MVYTPQNESPMANFPLPSPRICQPKSPNTHEDYRNSLNRFCFPISPFVLPEDKPWQIDHL 60

Query: 61  LQRLACLSARSLGFSLLHLGFSLSAPSEPTRRECRATIGSFSSRNSLYLILSSFFDHTPS 120
           LQRLACLSARSLGFS LHLGFSLSAPSEPTRRECRATIGSFSSRNSLYLILSSFFDHTPS
Sbjct: 61  LQRLACLSARSLGFSPLHLGFSLSAPSEPTRRECRATIGSFSSRNSLYLILSSFFDHTPS 120

Query: 121 LSNHAL 127
           LSNHAL
Sbjct: 121 LSNHAL 126

The following BLAST results are available for this feature:
BLAST of CSPI07G17320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G17320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K615_CUCSA5.2e-6799.21Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396385 PE=4 SV=1[more]
BLAST of CSPI07G17320 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G17320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189690|gb|KGN44923.1|7.4e-6799.21hypothetical protein Csa_7G396385 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G17320.1CSPI07G17320.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G17320Bhi09G000701Wax gourdcpiwgoB703
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G17320Silver-seed gourdcarcpiB0124
CSPI07G17320Silver-seed gourdcarcpiB0855
CSPI07G17320Cucumber (Chinese Long) v3cpicucB402
CSPI07G17320Cucumber (Chinese Long) v3cpicucB414
CSPI07G17320Watermelon (97103) v2cpiwmbB541
CSPI07G17320Watermelon (97103) v2cpiwmbB564
CSPI07G17320Watermelon (97103) v2cpiwmbB598
CSPI07G17320Wax gourdcpiwgoB658
CSPI07G17320Wax gourdcpiwgoB666
CSPI07G17320Cucurbita maxima (Rimu)cmacpiB934
CSPI07G17320Wild cucumber (PI 183967)cpicpiB167
CSPI07G17320Cucumber (Gy14) v1cgycpiB106
CSPI07G17320Cucumber (Gy14) v1cgycpiB325
CSPI07G17320Cucurbita maxima (Rimu)cmacpiB392
CSPI07G17320Cucurbita moschata (Rifu)cmocpiB381
CSPI07G17320Cucurbita moschata (Rifu)cmocpiB913
CSPI07G17320Cucumber (Chinese Long) v2cpicuB345
CSPI07G17320Cucumber (Chinese Long) v2cpicuB354
CSPI07G17320Melon (DHL92) v3.5.1cpimeB540
CSPI07G17320Melon (DHL92) v3.5.1cpimeB572
CSPI07G17320Watermelon (Charleston Gray)cpiwcgB555
CSPI07G17320Watermelon (Charleston Gray)cpiwcgB560
CSPI07G17320Watermelon (97103) v1cpiwmB587
CSPI07G17320Watermelon (97103) v1cpiwmB593
CSPI07G17320Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G17320Cucurbita pepo (Zucchini)cpecpiB344
CSPI07G17320Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G17320Bottle gourd (USVL1VR-Ls)cpilsiB530
CSPI07G17320Melon (DHL92) v3.6.1cpimedB525
CSPI07G17320Melon (DHL92) v3.6.1cpimedB557
CSPI07G17320Cucumber (Gy14) v2cgybcpiB331