Bhi08G000526 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000526
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Ring finger protein, putative
Location	chr8 : 20080608 .. 20081231 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAATTCTTCCACTTTCTCCAAATTTCATAACTTTCAAGCCTCTTCTGATCATCTTCCTAACGGAACTTTCAACATTATTGCTATCTCCGCCATCTCTGCCGTCACTGGAGTTTATGAGTTCCCATATTTCCCAATAGAAGATGAAATTCATGTTTTTAAGTGTCATTATTCTCATCATATTATTAATCGTCTTCATTTTTCATTACTACCAATACCGTCTTAGGCTTTACCAAACAAGAATCCTAGATATCGAGCAACGACTCAACTTACACCGTGAAATGCGACTCTTTGCTGGCTTCAGGCCCATATTCTACGGCAACGTCGGGCAGCGGTGCAATCGAACGTGGCCGAGCAGGAAGAAACCTCCTCCACTACCATGACGCTCGCTTACAAAGACACGCTTAAGATGACGGACAAAGTCGGTTCGGACGATTGTTGTGCCATTTGTATTGAAGAGTTTGAAGCGGAAGAGATTTGTGGAGTTATCGAGAATTGTGGCCATTATTTTCATAGGGATTGTATGGATCAGTGGCTGAGGATCGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATCTTGTAGCTCATAATAATAATTCCCAAGAAAATCAAGCTTAG

mRNA sequence

ATGTTTAATTCTTCCACTTTCTCCAAATTTCATAACTTTCAAGCCTCTTCTGATCATCTTCCTAACGGAACTTTCAACATTATTGCTATCTCCGCCATCTCTGCCGTCACTGGAGTTTATGAGTTCCCATATTTCCCAATAGAAGATGAAATTCATGCCCATATTCTACGGCAACGTCGGGCAGCGGTGCAATCGAACGTGGCCGAGCAGGAAGAAACCTCCTCCACTACCATGACGCTCGCTTACAAAGACACGCTTAAGATGACGGACAAAGTCGGTTCGGACGATTGTTGTGCCATTTGTATTGAAGAGTTTGAAGCGGAAGAGATTTGTGGAGTTATCGAGAATTGTGGCCATTATTTTCATAGGGATTGTATGGATCAGTGGCTGAGGATCGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATCTTGTAGCTCATAATAATAATTCCCAAGAAAATCAAGCTTAG

Coding sequence (CDS)

ATGTTTAATTCTTCCACTTTCTCCAAATTTCATAACTTTCAAGCCTCTTCTGATCATCTTCCTAACGGAACTTTCAACATTATTGCTATCTCCGCCATCTCTGCCGTCACTGGAGTTTATGAGTTCCCATATTTCCCAATAGAAGATGAAATTCATGCCCATATTCTACGGCAACGTCGGGCAGCGGTGCAATCGAACGTGGCCGAGCAGGAAGAAACCTCCTCCACTACCATGACGCTCGCTTACAAAGACACGCTTAAGATGACGGACAAAGTCGGTTCGGACGATTGTTGTGCCATTTGTATTGAAGAGTTTGAAGCGGAAGAGATTTGTGGAGTTATCGAGAATTGTGGCCATTATTTTCATAGGGATTGTATGGATCAGTGGCTGAGGATCGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATCTTGTAGCTCATAATAATAATTCCCAAGAAAATCAAGCTTAG

Protein sequence

MFNSSTFSKFHNFQASSDHLPNGTFNIIAISAISAVTGVYEFPYFPIEDEIHAHILRQRRAAVQSNVAEQEETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVAHNNNSQENQA

Homology

[Close]

BLAST of Bhi08G000526 vs. Swiss-Prot
Match: sp|Q9LSW9|ATL16_ARATH (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.9e-09
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EF+ EE   +I NC H FH DC+D WL+  + CPLCR  V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of Bhi08G000526 vs. Swiss-Prot
Match: sp|Q9P7E1|YOF7_SCHPO (Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP4H10.07 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.9e-09
Identity = 22/49 (44.90%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 93  GSDDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWL-RIESRCPLCR 141
           G+D+ C +C+  FE  + C  ++ C H+FHR+C+DQWL   ++ CPLCR
Sbjct: 520 GTDERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCR 568

[Close]

BLAST of Bhi08G000526 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EFE ++   V+  CGH FH DC+D W R  S CPLCR  V
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of Bhi08G000526 vs. Swiss-Prot
Match: sp|O22255|ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EFE E+   ++  CGH FH DC+D W R  S CPLCR  V
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of Bhi08G000526 vs. Swiss-Prot
Match: sp|Q8AWW4|RN128_XENLA (E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis OX=8355 GN=rnf128 PE=2 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 85  TLKMTDKV-GSD-DCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRC 142
           T+K  DKV G D D CA+CIE ++  ++  ++  C H+FH++C+D WL     CP+C+C
Sbjct: 245 TIKQGDKVLGPDGDSCAVCIEPYKPSDVVRIL-TCNHFFHKNCIDPWLLEHRTCPMCKC 302

[Close]

BLAST of Bhi08G000526 vs. TAIR10
Match: AT5G43420.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-10
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EF+ EE   +I NC H FH DC+D WL+  + CPLCR  V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of Bhi08G000526 vs. TAIR10
Match: AT3G62690.1 (AtL5)

HSP 1 Score: 61.2 bits (147), Expect = 6.4e-10
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EFE ++   V+  CGH FH DC+D W R  S CPLCR  V
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of Bhi08G000526 vs. TAIR10
Match: AT5G53110.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 6.4e-10
Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 95  DDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCR 141
           D  CAIC+ E+E +E    I  C H FH DC+D+WL++   CP+CR
Sbjct: 327 DATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCR 372

[Close]

BLAST of Bhi08G000526 vs. TAIR10
Match: AT2G47560.1 (RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 8.4e-10
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EFE E+   ++  CGH FH DC+D W R  S CPLCR  V
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of Bhi08G000526 vs. TAIR10
Match: AT3G47990.1 (SUGAR-INSENSITIVE 3)

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-09
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0


Query: 91  KVGSDDC--CAICIEEFE-AEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           K   DDC  C IC+EEF    E+ G+   C H FH +C+DQWLR+  +CP CRC V
Sbjct: 226 KAVPDDCGECLICLEEFHIGHEVRGL--PCAHNFHVECIDQWLRLNVKCPRCRCSV 279

[Close]

BLAST of Bhi08G000526 vs. TrEMBL
Match: tr|A0A1S4E1K2|A0A1S4E1K2_CUCME (RING-H2 finger protein ATL52-like OS=Cucumis melo OX=3656 GN=LOC107991538 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.0e-22
Identity = 57/99 (57.58%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 50  EIHAHILRQRRAA-VQSNVAEQEETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAE 109
           +  A I+RQR+               S  M +AYK  +K  +  GS  CCAICIEEFE E
Sbjct: 6   QTQAEIIRQRQTTXXXXXXXXXXXXXSAVMKVAYK--VKDNEAGGSYCCCAICIEEFEDE 65

Query: 110 EICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVA 148
           EICGV+E+CGH FH DCMDQWLRIESRCPLCRCLVH V+
Sbjct: 66  EICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVS 102

[Close]

BLAST of Bhi08G000526 vs. TrEMBL
Match: tr|A0A0L9U2K0|A0A0L9U2K0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g042900 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.1e-10
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 95  DDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVAHNNNSQE 154
           D  CAICIE++E  E+  V+  C HYFHRDC+D WL++ + CP+CR  +     NNN   
Sbjct: 106 DTTCAICIEDYEESEMLRVLPQCRHYFHRDCVDAWLKVNATCPVCRHSLMKTGSNNNINH 165

Query: 155 N 156
           N
Sbjct: 166 N 166

[Close]

BLAST of Bhi08G000526 vs. TrEMBL
Match: tr|A0A1S3TSW9|A0A1S3TSW9_VIGRR (RING-H2 finger protein ATL32-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106758423 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.8e-10
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 95  DDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCR-CLVHLVAHNN 151
           D  CAICIE++E  E+  V+  C HYFHRDC+D WL++ + CP+CR  L+   +HNN
Sbjct: 107 DTTCAICIEDYEEPEMLRVLPQCRHYFHRDCVDAWLKVNATCPVCRNSLMETRSHNN 163

[Close]

BLAST of Bhi08G000526 vs. TrEMBL
Match: tr|V7B4G9|V7B4G9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G057100g PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.8e-10
Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 79  TLAYKDTLKMTDKVGSDDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPL 138
           T  Y  T  +      D  CAICIE++E  E+  ++  C HYFHRDC+D WL++ + CP+
Sbjct: 91  TFPYSKTNSVATMCDHDSTCAICIEDYEESEMLRMMPQCRHYFHRDCVDAWLKVNATCPV 150

Query: 139 CRCLVHLVAHNNNS 153
           CR  +     NN++
Sbjct: 151 CRNSLKETRSNNDN 164

[Close]

BLAST of Bhi08G000526 vs. TrEMBL
Match: tr|A0A0D2PJZ0|A0A0D2PJZ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G363500 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-09
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 71  EETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWL 130
           EET  +   L Y +  K+  K  +D CC+IC+ +++  +   ++ NCGH FH +C+D WL
Sbjct: 76  EETIKSYPKLTYSEA-KLLKKGSTDTCCSICLNDYKGSDSLSMLPNCGHLFHLECVDHWL 135

Query: 131 RIESRCPLCR 141
           R++S CP+CR
Sbjct: 136 RLQSTCPVCR 144

[Close]

BLAST of Bhi08G000526 vs. NCBI nr
Match: XP_023520574.1 (RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-23
Identity = 55/87 (63.22%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 66  NVAEQEETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAEEICGVIENCGHYFHRDC 125
           N AE EE +S    +AYKD +K T++  SDDCCAICIE FE +EICGV++ CGH FH+ C
Sbjct: 78  NTAE-EEAASIVTKVAYKD-IKTTEEADSDDCCAICIEGFEEDEICGVLDRCGHCFHKIC 137

Query: 126 MDQWLRIESRCPLCRCLVHLVAHNNNS 153
           +DQWL I+SRCPLCRCLV +V+ NNNS
Sbjct: 138 IDQWLGIKSRCPLCRCLVRVVSENNNS 162

[Close]

BLAST of Bhi08G000526 vs. NCBI nr
Match: XP_022970384.1 (RING-H2 finger protein ATL64-like [Cucurbita maxima])

HSP 1 Score: 114.8 bits (286), Expect = 2.7e-22
Identity = 56/104 (53.85%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 53  AHILRQRRAAV----QSNVAEQEETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAE 112
           A ++RQ+++      + N AE EE +S    +AY+D +K T +  SDDCCAICIE FE E
Sbjct: 57  AEVMRQQQSIAVPPPRPNTAE-EEAASIVTKVAYRD-IKPTKEADSDDCCAICIEGFEEE 116

Query: 113 EICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVAHNNNS 153
           EICGV++ C H FH+ C+D+WL I SRCPLCRCLV +V+ NNNS
Sbjct: 117 EICGVVDGCDHCFHKVCIDKWLGIVSRCPLCRCLVRVVSENNNS 158

[Close]

BLAST of Bhi08G000526 vs. NCBI nr
Match: XP_016902103.1 (PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo])

HSP 1 Score: 113.6 bits (283), Expect = 6.0e-22
Identity = 57/99 (57.58%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 50  EIHAHILRQRRAA-VQSNVAEQEETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAE 109
           +  A I+RQR+               S  M +AYK  +K  +  GS  CCAICIEEFE E
Sbjct: 6   QTQAEIIRQRQTTXXXXXXXXXXXXXSAVMKVAYK--VKDNEAGGSYCCCAICIEEFEDE 65

Query: 110 EICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVA 148
           EICGV+E+CGH FH DCMDQWLRIESRCPLCRCLVH V+
Sbjct: 66  EICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVS 102

[Close]

BLAST of Bhi08G000526 vs. NCBI nr
Match: XP_022964751.1 (RING-H2 finger protein ATL64-like [Cucurbita moschata])

HSP 1 Score: 109.8 bits (273), Expect = 8.7e-21
Identity = 47/73 (64.38%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 80  LAYKDTLKMTDKVGSDDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLC 139
           +AY+D +K T++   DD CAICIE FE EEICGV++ CGH FH+ C+DQWLRI SRCPLC
Sbjct: 87  VAYRD-IKTTEEADVDDYCAICIEGFEEEEICGVLDRCGHCFHKVCIDQWLRIGSRCPLC 146

Query: 140 RCLVHLVAHNNNS 153
           RCL+ +V+ NNNS
Sbjct: 147 RCLIRVVSENNNS 158

[Close]

BLAST of Bhi08G000526 vs. NCBI nr
Match: XP_022158249.1 (E3 ubiquitin-protein ligase RING1-like [Momordica charantia])

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-16
Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = 0


Query: 55  ILRQRRAAVQSNVAEQ--EETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAEEICG 114
           I+   RA  Q +   Q  EE S+T + +     ++  + + SD  CAIC E FE +++C 
Sbjct: 82  IVLSERARQQPSPPPQTVEEASATAVAI-----IEAEEIIDSDRDCAICFEGFEEKQVCR 141

Query: 115 VIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVAHNNNSQENQA 158
           VIE CGH+FH+DC+DQWL +E  CPLCRC V LV+ N+   ENQA
Sbjct: 142 VIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLVSDNSPEIENQA 181

The following BLAST results are available for this feature:

BLAST of Bhi08G000526 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LSW9\|ATL16_ARATH	8.9e-09	50.00	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
sp\|Q9P7E1\|YOF7_SCHPO	8.9e-09	44.90	Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strai...	[more]
sp\|Q9LZJ6\|ATL5_ARATH	1.2e-08	50.00	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
sp\|O22255\|ATL64_ARATH	1.5e-08	50.00	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
sp\|Q8AWW4\|RN128_XENLA	2.0e-08	42.37	E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis OX=8355 GN=rnf128 PE=2 SV=2	[more]

BLAST of Bhi08G000526 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43420.1	4.9e-10	50.00	RING/U-box superfamily protein	[more]
AT3G62690.1	6.4e-10	50.00	AtL5	[more]
AT5G53110.1	6.4e-10	47.83	RING/U-box superfamily protein	[more]
AT2G47560.1	8.4e-10	50.00	RING/U-box superfamily protein	[more]
AT3G47990.1	1.9e-09	50.00	SUGAR-INSENSITIVE 3	[more]

BLAST of Bhi08G000526 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E1K2\|A0A1S4E1K2_CUCME	4.0e-22	57.58	RING-H2 finger protein ATL52-like OS=Cucumis melo OX=3656 GN=LOC107991538 PE=4 S...	[more]
tr\|A0A0L9U2K0\|A0A0L9U2K0_PHAAN	2.1e-10	47.54	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g042900 PE...	[more]
tr\|A0A1S3TSW9\|A0A1S3TSW9_VIGRR	7.8e-10	50.88	RING-H2 finger protein ATL32-like OS=Vigna radiata var. radiata OX=3916 GN=LOC10...	[more]
tr\|V7B4G9\|V7B4G9_PHAVU	7.8e-10	39.19	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G057100g PE=4 ...	[more]
tr\|A0A0D2PJZ0\|A0A0D2PJZ0_GOSRA	1.0e-09	40.00	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G363500 PE=4 ...	[more]

BLAST of Bhi08G000526 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520574.1	1.1e-23	63.22	RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo]	[more]
XP_022970384.1	2.7e-22	53.85	RING-H2 finger protein ATL64-like [Cucurbita maxima]	[more]
XP_016902103.1	6.0e-22	57.58	PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo]	[more]
XP_022964751.1	8.7e-21	64.38	RING-H2 finger protein ATL64-like [Cucurbita moschata]	[more]
XP_022158249.1	1.3e-16	45.71	E3 ubiquitin-protein ligase RING1-like [Momordica charantia]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000526	Bhi08M000526	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 98..139 e-value: 5.9E-6 score: 35.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 97..140 e-value: 5.9E-12 score: 45.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 98..140 score: 13.286
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 53..145 e-value: 7.0E-18 score: 66.1
None	No IPR available	PANTHER	PTHR14155:SF441	SUBFAMILY NOT NAMED	coord: 64..148
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 64..148
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 90..146

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G000526	MELO3C020634	Melon (DHL92) v3.5.1	mewgoB161
Bhi08G000526	CSPI01G23050	Wild cucumber (PI 183967)	cpiwgoB048
Bhi08G000526	Cucsa.117940	Cucumber (Gy14) v1	cgywgoB204
Bhi08G000526	CmoCh13G001260	Cucurbita moschata (Rifu)	cmowgoB0245
Bhi08G000526	MELO3C020634.2	Melon (DHL92) v3.6.1	medwgoB164

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G000526	Wax gourd	wgowgoB103
Bhi08G000526	Cucumber (Gy14) v2	cgybwgoB045
Bhi08G000526	Cucumber (Gy14) v2	cgybwgoB605
Bhi08G000526	Cucurbita maxima (Rimu)	cmawgoB0252
Bhi08G000526	Cucurbita maxima (Rimu)	cmawgoB0593
Bhi08G000526	Cucurbita maxima (Rimu)	cmawgoB0703
Bhi08G000526	Cucurbita maxima (Rimu)	cmawgoB0769
Bhi08G000526	Cucurbita moschata (Rifu)	cmowgoB0590
Bhi08G000526	Cucurbita moschata (Rifu)	cmowgoB0761
Bhi08G000526	Cucurbita pepo (Zucchini)	cpewgoB0372
Bhi08G000526	Cucurbita pepo (Zucchini)	cpewgoB0650
Bhi08G000526	Cucurbita pepo (Zucchini)	cpewgoB0697
Bhi08G000526	Cucurbita pepo (Zucchini)	cpewgoB0968
Bhi08G000526	Wild cucumber (PI 183967)	cpiwgoB641
Bhi08G000526	Cucumber (Chinese Long) v3	cucwgoB050
Bhi08G000526	Cucumber (Chinese Long) v3	cucwgoB655
Bhi08G000526	Cucumber (Chinese Long) v2	cuwgoB048
Bhi08G000526	Cucumber (Chinese Long) v2	cuwgoB635
Bhi08G000526	Bottle gourd (USVL1VR-Ls)	lsiwgoB094
Bhi08G000526	Bottle gourd (USVL1VR-Ls)	lsiwgoB239
Bhi08G000526	Melon (DHL92) v3.6.1	medwgoB147
Bhi08G000526	Melon (DHL92) v3.5.1	mewgoB144
Bhi08G000526	Watermelon (Charleston Gray)	wcgwgoB315
Bhi08G000526	Watermelon (Charleston Gray)	wcgwgoB340
Bhi08G000526	Watermelon (97103) v2	wgowmbB467
Bhi08G000526	Watermelon (97103) v2	wgowmbB470
Bhi08G000526	Watermelon (97103) v1	wgowmB471
Bhi08G000526	Watermelon (97103) v1	wgowmB520
Bhi08G000526	Silver-seed gourd	carwgoB0393
Bhi08G000526	Silver-seed gourd	carwgoB0426
Bhi08G000526	Silver-seed gourd	carwgoB0468
Bhi08G000526	Silver-seed gourd	carwgoB0535