Bhi08M000526 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08M000526
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	Ring finger protein, putative
Location	chr8 : 20080608 .. 20081231 (+)
Sequence length	474

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAATTCTTCCACTTTCTCCAAATTTCATAACTTTCAAGCCTCTTCTGATCATCTTCCTAACGGAACTTTCAACATTATTGCTATCTCCGCCATCTCTGCCGTCACTGGAGTTTATGAGTTCCCATATTTCCCAATAGAAGATGAAATTCATGTTTTTAAGTGTCATTATTCTCATCATATTATTAATCGTCTTCATTTTTCATTACTACCAATACCGTCTTAGGCTTTACCAAACAAGAATCCTAGATATCGAGCAACGACTCAACTTACACCGTGAAATGCGACTCTTTGCTGGCTTCAGGCCCATATTCTACGGCAACGTCGGGCAGCGGTGCAATCGAACGTGGCCGAGCAGGAAGAAACCTCCTCCACTACCATGACGCTCGCTTACAAAGACACGCTTAAGATGACGGACAAAGTCGGTTCGGACGATTGTTGTGCCATTTGTATTGAAGAGTTTGAAGCGGAAGAGATTTGTGGAGTTATCGAGAATTGTGGCCATTATTTTCATAGGGATTGTATGGATCAGTGGCTGAGGATCGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATCTTGTAGCTCATAATAATAATTCCCAAGAAAATCAAGCTTAG

mRNA sequence

ATGTTTAATTCTTCCACTTTCTCCAAATTTCATAACTTTCAAGCCTCTTCTGATCATCTTCCTAACGGAACTTTCAACATTATTGCTATCTCCGCCATCTCTGCCGTCACTGGAGTTTATGAGTTCCCATATTTCCCAATAGAAGATGAAATTCATGCCCATATTCTACGGCAACGTCGGGCAGCGGTGCAATCGAACGTGGCCGAGCAGGAAGAAACCTCCTCCACTACCATGACGCTCGCTTACAAAGACACGCTTAAGATGACGGACAAAGTCGGTTCGGACGATTGTTGTGCCATTTGTATTGAAGAGTTTGAAGCGGAAGAGATTTGTGGAGTTATCGAGAATTGTGGCCATTATTTTCATAGGGATTGTATGGATCAGTGGCTGAGGATCGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATCTTGTAGCTCATAATAATAATTCCCAAGAAAATCAAGCTTAG

Coding sequence (CDS)

ATGTTTAATTCTTCCACTTTCTCCAAATTTCATAACTTTCAAGCCTCTTCTGATCATCTTCCTAACGGAACTTTCAACATTATTGCTATCTCCGCCATCTCTGCCGTCACTGGAGTTTATGAGTTCCCATATTTCCCAATAGAAGATGAAATTCATGCCCATATTCTACGGCAACGTCGGGCAGCGGTGCAATCGAACGTGGCCGAGCAGGAAGAAACCTCCTCCACTACCATGACGCTCGCTTACAAAGACACGCTTAAGATGACGGACAAAGTCGGTTCGGACGATTGTTGTGCCATTTGTATTGAAGAGTTTGAAGCGGAAGAGATTTGTGGAGTTATCGAGAATTGTGGCCATTATTTTCATAGGGATTGTATGGATCAGTGGCTGAGGATCGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATCTTGTAGCTCATAATAATAATTCCCAAGAAAATCAAGCTTAG

Protein sequence

MFNSSTFSKFHNFQASSDHLPNGTFNIIAISAISAVTGVYEFPYFPIEDEIHAHILRQRRAAVQSNVAEQEETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVAHNNNSQENQA

Homology

[Close]

BLAST of Bhi08M000526 vs. Swiss-Prot
Match: sp|Q9LSW9|ATL16_ARATH (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.9e-09
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EF+ EE   +I NC H FH DC+D WL+  + CPLCR  V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of Bhi08M000526 vs. Swiss-Prot
Match: sp|Q9P7E1|YOF7_SCHPO (Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP4H10.07 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.9e-09
Identity = 22/49 (44.90%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 93  GSDDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWL-RIESRCPLCR 141
           G+D+ C +C+  FE  + C  ++ C H+FHR+C+DQWL   ++ CPLCR
Sbjct: 520 GTDERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCR 568

[Close]

BLAST of Bhi08M000526 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EFE ++   V+  CGH FH DC+D W R  S CPLCR  V
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of Bhi08M000526 vs. Swiss-Prot
Match: sp|O22255|ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EFE E+   ++  CGH FH DC+D W R  S CPLCR  V
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of Bhi08M000526 vs. Swiss-Prot
Match: sp|Q8AWW4|RN128_XENLA (E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis OX=8355 GN=rnf128 PE=2 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 85  TLKMTDKV-GSD-DCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRC 142
           T+K  DKV G D D CA+CIE ++  ++  ++  C H+FH++C+D WL     CP+C+C
Sbjct: 245 TIKQGDKVLGPDGDSCAVCIEPYKPSDVVRIL-TCNHFFHKNCIDPWLLEHRTCPMCKC 302

[Close]

BLAST of Bhi08M000526 vs. TAIR10
Match: AT5G43420.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-10
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EF+ EE   +I NC H FH DC+D WL+  + CPLCR  V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of Bhi08M000526 vs. TAIR10
Match: AT3G62690.1 (AtL5)

HSP 1 Score: 61.2 bits (147), Expect = 6.4e-10
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EFE ++   V+  CGH FH DC+D W R  S CPLCR  V
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of Bhi08M000526 vs. TAIR10
Match: AT5G53110.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 6.4e-10
Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 95  DDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCR 141
           D  CAIC+ E+E +E    I  C H FH DC+D+WL++   CP+CR
Sbjct: 327 DATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCR 372

[Close]

BLAST of Bhi08M000526 vs. TAIR10
Match: AT2G47560.1 (RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 8.4e-10
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 98  CAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           C++C+ EFE E+   ++  CGH FH DC+D W R  S CPLCR  V
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of Bhi08M000526 vs. TAIR10
Match: AT3G47990.1 (SUGAR-INSENSITIVE 3)

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-09
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0


Query: 91  KVGSDDC--CAICIEEFE-AEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLV 144
           K   DDC  C IC+EEF    E+ G+   C H FH +C+DQWLR+  +CP CRC V
Sbjct: 226 KAVPDDCGECLICLEEFHIGHEVRGL--PCAHNFHVECIDQWLRLNVKCPRCRCSV 279

[Close]

BLAST of Bhi08M000526 vs. TrEMBL
Match: tr|A0A1S4E1K2|A0A1S4E1K2_CUCME (RING-H2 finger protein ATL52-like OS=Cucumis melo OX=3656 GN=LOC107991538 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.0e-22
Identity = 57/99 (57.58%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 50  EIHAHILRQRRAA-VQSNVAEQEETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAE 109
           +  A I+RQR+               S  M +AYK  +K  +  GS  CCAICIEEFE E
Sbjct: 6   QTQAEIIRQRQTTXXXXXXXXXXXXXSAVMKVAYK--VKDNEAGGSYCCCAICIEEFEDE 65

Query: 110 EICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVA 148
           EICGV+E+CGH FH DCMDQWLRIESRCPLCRCLVH V+
Sbjct: 66  EICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVS 102

[Close]

BLAST of Bhi08M000526 vs. TrEMBL
Match: tr|A0A0L9U2K0|A0A0L9U2K0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g042900 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.1e-10
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 95  DDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVAHNNNSQE 154
           D  CAICIE++E  E+  V+  C HYFHRDC+D WL++ + CP+CR  +     NNN   
Sbjct: 106 DTTCAICIEDYEESEMLRVLPQCRHYFHRDCVDAWLKVNATCPVCRHSLMKTGSNNNINH 165

Query: 155 N 156
           N
Sbjct: 166 N 166

[Close]

BLAST of Bhi08M000526 vs. TrEMBL
Match: tr|A0A1S3TSW9|A0A1S3TSW9_VIGRR (RING-H2 finger protein ATL32-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106758423 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.8e-10
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 95  DDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLCR-CLVHLVAHNN 151
           D  CAICIE++E  E+  V+  C HYFHRDC+D WL++ + CP+CR  L+   +HNN
Sbjct: 107 DTTCAICIEDYEEPEMLRVLPQCRHYFHRDCVDAWLKVNATCPVCRNSLMETRSHNN 163

[Close]

BLAST of Bhi08M000526 vs. TrEMBL
Match: tr|V7B4G9|V7B4G9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G057100g PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.8e-10
Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 79  TLAYKDTLKMTDKVGSDDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPL 138
           T  Y  T  +      D  CAICIE++E  E+  ++  C HYFHRDC+D WL++ + CP+
Sbjct: 91  TFPYSKTNSVATMCDHDSTCAICIEDYEESEMLRMMPQCRHYFHRDCVDAWLKVNATCPV 150

Query: 139 CRCLVHLVAHNNNS 153
           CR  +     NN++
Sbjct: 151 CRNSLKETRSNNDN 164

[Close]

BLAST of Bhi08M000526 vs. TrEMBL
Match: tr|A0A0D2PJZ0|A0A0D2PJZ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G363500 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-09
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 71  EETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWL 130
           EET  +   L Y +  K+  K  +D CC+IC+ +++  +   ++ NCGH FH +C+D WL
Sbjct: 76  EETIKSYPKLTYSEA-KLLKKGSTDTCCSICLNDYKGSDSLSMLPNCGHLFHLECVDHWL 135

Query: 131 RIESRCPLCR 141
           R++S CP+CR
Sbjct: 136 RLQSTCPVCR 144

[Close]

BLAST of Bhi08M000526 vs. NCBI nr
Match: XP_023520574.1 (RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-23
Identity = 55/87 (63.22%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 66  NVAEQEETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAEEICGVIENCGHYFHRDC 125
           N AE EE +S    +AYKD +K T++  SDDCCAICIE FE +EICGV++ CGH FH+ C
Sbjct: 78  NTAE-EEAASIVTKVAYKD-IKTTEEADSDDCCAICIEGFEEDEICGVLDRCGHCFHKIC 137

Query: 126 MDQWLRIESRCPLCRCLVHLVAHNNNS 153
           +DQWL I+SRCPLCRCLV +V+ NNNS
Sbjct: 138 IDQWLGIKSRCPLCRCLVRVVSENNNS 162

[Close]

BLAST of Bhi08M000526 vs. NCBI nr
Match: XP_022970384.1 (RING-H2 finger protein ATL64-like [Cucurbita maxima])

HSP 1 Score: 114.8 bits (286), Expect = 2.7e-22
Identity = 56/104 (53.85%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 53  AHILRQRRAAV----QSNVAEQEETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAE 112
           A ++RQ+++      + N AE EE +S    +AY+D +K T +  SDDCCAICIE FE E
Sbjct: 57  AEVMRQQQSIAVPPPRPNTAE-EEAASIVTKVAYRD-IKPTKEADSDDCCAICIEGFEEE 116

Query: 113 EICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVAHNNNS 153
           EICGV++ C H FH+ C+D+WL I SRCPLCRCLV +V+ NNNS
Sbjct: 117 EICGVVDGCDHCFHKVCIDKWLGIVSRCPLCRCLVRVVSENNNS 158

[Close]

BLAST of Bhi08M000526 vs. NCBI nr
Match: XP_016902103.1 (PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo])

HSP 1 Score: 113.6 bits (283), Expect = 6.0e-22
Identity = 57/99 (57.58%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 50  EIHAHILRQRRAA-VQSNVAEQEETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAE 109
           +  A I+RQR+               S  M +AYK  +K  +  GS  CCAICIEEFE E
Sbjct: 6   QTQAEIIRQRQTTXXXXXXXXXXXXXSAVMKVAYK--VKDNEAGGSYCCCAICIEEFEDE 65

Query: 110 EICGVIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVA 148
           EICGV+E+CGH FH DCMDQWLRIESRCPLCRCLVH V+
Sbjct: 66  EICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVS 102

[Close]

BLAST of Bhi08M000526 vs. NCBI nr
Match: XP_022964751.1 (RING-H2 finger protein ATL64-like [Cucurbita moschata])

HSP 1 Score: 109.8 bits (273), Expect = 8.7e-21
Identity = 47/73 (64.38%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 80  LAYKDTLKMTDKVGSDDCCAICIEEFEAEEICGVIENCGHYFHRDCMDQWLRIESRCPLC 139
           +AY+D +K T++   DD CAICIE FE EEICGV++ CGH FH+ C+DQWLRI SRCPLC
Sbjct: 87  VAYRD-IKTTEEADVDDYCAICIEGFEEEEICGVLDRCGHCFHKVCIDQWLRIGSRCPLC 146

Query: 140 RCLVHLVAHNNNS 153
           RCL+ +V+ NNNS
Sbjct: 147 RCLIRVVSENNNS 158

[Close]

BLAST of Bhi08M000526 vs. NCBI nr
Match: XP_022158249.1 (E3 ubiquitin-protein ligase RING1-like [Momordica charantia])

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-16
Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = 0


Query: 55  ILRQRRAAVQSNVAEQ--EETSSTTMTLAYKDTLKMTDKVGSDDCCAICIEEFEAEEICG 114
           I+   RA  Q +   Q  EE S+T + +     ++  + + SD  CAIC E FE +++C 
Sbjct: 82  IVLSERARQQPSPPPQTVEEASATAVAI-----IEAEEIIDSDRDCAICFEGFEEKQVCR 141

Query: 115 VIENCGHYFHRDCMDQWLRIESRCPLCRCLVHLVAHNNNSQENQA 158
           VIE CGH+FH+DC+DQWL +E  CPLCRC V LV+ N+   ENQA
Sbjct: 142 VIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLVSDNSPEIENQA 181

The following BLAST results are available for this feature:

BLAST of Bhi08M000526 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LSW9\|ATL16_ARATH	8.9e-09	50.00	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
sp\|Q9P7E1\|YOF7_SCHPO	8.9e-09	44.90	Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strai...	[more]
sp\|Q9LZJ6\|ATL5_ARATH	1.2e-08	50.00	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
sp\|O22255\|ATL64_ARATH	1.5e-08	50.00	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
sp\|Q8AWW4\|RN128_XENLA	2.0e-08	42.37	E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis OX=8355 GN=rnf128 PE=2 SV=2	[more]

BLAST of Bhi08M000526 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43420.1	4.9e-10	50.00	RING/U-box superfamily protein	[more]
AT3G62690.1	6.4e-10	50.00	AtL5	[more]
AT5G53110.1	6.4e-10	47.83	RING/U-box superfamily protein	[more]
AT2G47560.1	8.4e-10	50.00	RING/U-box superfamily protein	[more]
AT3G47990.1	1.9e-09	50.00	SUGAR-INSENSITIVE 3	[more]

BLAST of Bhi08M000526 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E1K2\|A0A1S4E1K2_CUCME	4.0e-22	57.58	RING-H2 finger protein ATL52-like OS=Cucumis melo OX=3656 GN=LOC107991538 PE=4 S...	[more]
tr\|A0A0L9U2K0\|A0A0L9U2K0_PHAAN	2.1e-10	47.54	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g042900 PE...	[more]
tr\|A0A1S3TSW9\|A0A1S3TSW9_VIGRR	7.8e-10	50.88	RING-H2 finger protein ATL32-like OS=Vigna radiata var. radiata OX=3916 GN=LOC10...	[more]
tr\|V7B4G9\|V7B4G9_PHAVU	7.8e-10	39.19	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G057100g PE=4 ...	[more]
tr\|A0A0D2PJZ0\|A0A0D2PJZ0_GOSRA	1.0e-09	40.00	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G363500 PE=4 ...	[more]

BLAST of Bhi08M000526 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520574.1	1.1e-23	63.22	RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo]	[more]
XP_022970384.1	2.7e-22	53.85	RING-H2 finger protein ATL64-like [Cucurbita maxima]	[more]
XP_016902103.1	6.0e-22	57.58	PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo]	[more]
XP_022964751.1	8.7e-21	64.38	RING-H2 finger protein ATL64-like [Cucurbita moschata]	[more]
XP_022158249.1	1.3e-16	45.71	E3 ubiquitin-protein ligase RING1-like [Momordica charantia]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi08G000526	Bhi08G000526	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi08M000526.exon1	Bhi08M000526.exon1	exon
Bhi08M000526.exon2	Bhi08M000526.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi08M000526	cds.Bhi08M000526	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi08M000526	Bhi08M000526-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 98..139 e-value: 5.9E-6 score: 35.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 97..140 e-value: 5.9E-12 score: 45.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 98..140 score: 13.286
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 53..145 e-value: 7.0E-18 score: 66.1
None	No IPR available	PANTHER	PTHR14155:SF441	SUBFAMILY NOT NAMED	coord: 64..148
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 64..148
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 90..146