Bhi08G000330 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000330
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Histone H2A
Location	chr8 : 13783912 .. 13785162 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGATTGAACTGTATCGTACGGTCAAACGTTCACCCATTTCTGAATCCGCCTCCATCCCTAAATCCCCGTTGTTTTACGCCGCTATAAAATCATTCCCGCAACTCCAATCCTTCCCATCGTCATATCCACTGAGCCCAATTCTCTTTTCTAGTAATTCCCGCAACTTCCCTTTGATTTTCCGGCGACTAAGTCAAGTTCCGATGGAGACCGGCGGCAAGTTGAAGAAGGGAGCTGGTGGAAGAAAGGGTGGCGGCCCGAAGAAGAAGCCGGTTTCTCGCTCCGTCAAAGCCGGCCTCCAGTTCCCCGTCGGTAGGATCGGTCGGTACTTGAAGCATGGCCGGTATGCTCGACGTGTCGGTACTGGAGCTCCGGTCTACATGGCCGCCGTTCTTGAGTATCTCGCCGCTGAGGTACCTGCTGAACTACCTTTGCTCTCTTAGATCTGGGTTTCATTCTGTTTGGTTTAGATTTGGTTTTCATGTCTGATAGTTAAGGATTTGAGTTTACATCAAAGAACTGATGAATTTGAAGTGATAGATCTTCTAATTTTGAGCTGGGGTTTTCTAATTTTTGCTTTTCGATGAAAGATTGCTGTTGTTTGTAACTCAATTATTGTTGGGAATGTTGAATTCAACTTGATTCACTTGTTTGATTGAGTGGGCATGATTCATGAACGTGATTGAAACCTAGGGTTTTATGATCTGGAATTTCAAATCCGCTACAAATTGGTATATTTTCGATCTCTAATTTGTCTAAATGGGGGAAATTTAGGTGTTGGAATTGGCTGGAAATGCTGCTAGAGACAACAAGAAGAACAGAATAATTCCTAGGCATGTATTGTTGGCCATAAGGAACGATGAAGAGCTTGGGAAATTGCTTGCTGGTGTAACAATTGCACATGGTGGTGTTCTTCCAAACATAAACCCAGTTCTTTTGCCAAAGAAAAGTGAGAAAGCAGCCGCTAAAGAACCAAAATCTCCATCAAAGGCCTCCAAAGCAACCAAATCTCCAAAGAAGGCTTAGTTATTTTTCTGTTTCTCTTTTTCTTCTGAAGAACTTTGACTTGTTCTTTCCCCATTTGTATGTAGCTGGTTGGCTTTTTAGGGTCTTCTTCTGTGTTGTTTATCAATGTAAGCTCTAAACTGATGAATTTGGAGACTGTATCAATCCCCATCATCTCGATGATCAAACTCTGTAATGGTTATGATTGTTTAGCCATCAATTTGCTTTCTACATTCTGCTAATCTTC

mRNA sequence

GTCGATTGAACTGTATCGTACGGTCAAACGTTCACCCATTTCTGAATCCGCCTCCATCCCTAAATCCCCGTTGTTTTACGCCGCTATAAAATCATTCCCGCAACTCCAATCCTTCCCATCGTCATATCCACTGAGCCCAATTCTCTTTTCTAGTAATTCCCGCAACTTCCCTTTGATTTTCCGGCGACTAAGTCAAGTTCCGATGGAGACCGGCGGCAAGTTGAAGAAGGGAGCTGGTGGAAGAAAGGGTGGCGGCCCGAAGAAGAAGCCGGTTTCTCGCTCCGTCAAAGCCGGCCTCCAGTTCCCCGTCGGTAGGATCGGTCGGTACTTGAAGCATGGCCGGTATGCTCGACGTGTCGGTACTGGAGCTCCGGTCTACATGGCCGCCGTTCTTGAGTATCTCGCCGCTGAGGTGTTGGAATTGGCTGGAAATGCTGCTAGAGACAACAAGAAGAACAGAATAATTCCTAGGCATGTATTGTTGGCCATAAGGAACGATGAAGAGCTTGGGAAATTGCTTGCTGGTGTAACAATTGCACATGGTGGTGTTCTTCCAAACATAAACCCAGTTCTTTTGCCAAAGAAAAGTGAGAAAGCAGCCGCTAAAGAACCAAAATCTCCATCAAAGGCCTCCAAAGCAACCAAATCTCCAAAGAAGGCTTAGTTATTTTTCTGTTTCTCTTTTTCTTCTGAAGAACTTTGACTTGTTCTTTCCCCATTTGTATGTAGCTGGTTGGCTTTTTAGGGTCTTCTTCTGTGTTGTTTATCAATGTAAGCTCTAAACTGATGAATTTGGAGACTGTATCAATCCCCATCATCTCGATGATCAAACTCTGTAATGGTTATGATTGTTTAGCCATCAATTTGCTTTCTACATTCTGCTAATCTTC

Coding sequence (CDS)

ATGGAGACCGGCGGCAAGTTGAAGAAGGGAGCTGGTGGAAGAAAGGGTGGCGGCCCGAAGAAGAAGCCGGTTTCTCGCTCCGTCAAAGCCGGCCTCCAGTTCCCCGTCGGTAGGATCGGTCGGTACTTGAAGCATGGCCGGTATGCTCGACGTGTCGGTACTGGAGCTCCGGTCTACATGGCCGCCGTTCTTGAGTATCTCGCCGCTGAGGTGTTGGAATTGGCTGGAAATGCTGCTAGAGACAACAAGAAGAACAGAATAATTCCTAGGCATGTATTGTTGGCCATAAGGAACGATGAAGAGCTTGGGAAATTGCTTGCTGGTGTAACAATTGCACATGGTGGTGTTCTTCCAAACATAAACCCAGTTCTTTTGCCAAAGAAAAGTGAGAAAGCAGCCGCTAAAGAACCAAAATCTCCATCAAAGGCCTCCAAAGCAACCAAATCTCCAAAGAAGGCTTAG

Protein sequence

METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAAAKEPKSPSKASKATKSPKKA

Homology

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BLAST of Bhi08G000330 vs. Swiss-Prot
Match: sp|Q9M531|H2A_EUPES (Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-63
Identity = 124/134 (92.54%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           M+TG KLKKGAG RKGGGPKKKPVSRSVKAGLQFPVGRIGR+LK GRYA+RVG+GAPVY+
Sbjct: 1   MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKAAA 135
           NPVLLPKK+EKAAA
Sbjct: 121 NPVLLPKKAEKAAA 134

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BLAST of Bhi08G000330 vs. Swiss-Prot
Match: sp|Q9LZ46|H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.3e-60
Identity = 118/135 (87.41%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   METGGKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVY 60
           M++G K+KKGA GR+ GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRY++RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  MAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPN 120
           +AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSEKAAA 135
           INP+LLPKKSEKAA+
Sbjct: 121 INPILLPKKSEKAAS 135

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BLAST of Bhi08G000330 vs. Swiss-Prot
Match: sp|Q2HU65|H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.8e-59
Identity = 115/132 (87.12%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           M+   K KKGAGGRKGGGP+KK V+RS++AGLQFPVGRIGRYLK GRYA+RVGTGAPVY+
Sbjct: 1   MDASTKTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKA 133
           NPVLLPKK+E++
Sbjct: 121 NPVLLPKKTERS 132

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BLAST of Bhi08G000330 vs. Swiss-Prot
Match: sp|A2WQG7|H2A5_ORYSI (Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.2e-58
Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 4   GGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYMAAV 63
           GGKLKKGA GRK   P+KK VSRSVKAGLQFPVGRIGRYLK GRYA+R+GTGAPVY+AAV
Sbjct: 9   GGKLKKGAAGRKXXXPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAV 68

Query: 64  LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 123
           LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV
Sbjct: 69  LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 128

Query: 124 LLPKK-SEKAAA 135
           LLPKK +EKAAA
Sbjct: 129 LLPKKTAEKAAA 140

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BLAST of Bhi08G000330 vs. Swiss-Prot
Match: sp|Q94E96|H2A5_ORYSJ (Probable histone H2A.5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0502700 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.2e-58
Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 4   GGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYMAAV 63
           GGKLKKGA GRK   P+KK VSRSVKAGLQFPVGRIGRYLK GRYA+R+GTGAPVY+AAV
Sbjct: 9   GGKLKKGAAGRKXXXPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAV 68

Query: 64  LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 123
           LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV
Sbjct: 69  LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 128

Query: 124 LLPKK-SEKAAA 135
           LLPKK +EKAAA
Sbjct: 129 LLPKKTAEKAAA 140

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BLAST of Bhi08G000330 vs. TAIR10
Match: AT5G02560.2 (histone H2A 12)

HSP 1 Score: 218.0 bits (554), Expect = 4.0e-57
Identity = 118/159 (74.21%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 1   METGGKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVY 60
           M++G K+KKGA GR+ GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRY++RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  MAAVLEYLAAE------------------------VLELAGNAARDNKKNRIIPRHVLLA 120
           +AAVLEYLAAE                        VLELAGNAARDNKKNRIIPRHVLLA
Sbjct: 61  LAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLA 120

Query: 121 IRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAAA 135
           +RNDEELG LL GVTIAHGGVLPNINP+LLPKKSEKAA+
Sbjct: 121 VRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAAS 159

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BLAST of Bhi08G000330 vs. TAIR10
Match: AT5G59870.1 (histone H2A 6)

HSP 1 Score: 203.4 bits (516), Expect = 1.0e-52
Identity = 109/136 (80.15%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 1   METGGKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVY 60
           ME+ GK+KK  GGRK  G PK K VS+S+KAGLQFPVGRI R+LK GRYA+R+G GAPVY
Sbjct: 1   MESTGKVKKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVY 60

Query: 61  MAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPN 120
           MAAVLEYLAAEVLELAGNAARDNKK+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPN
Sbjct: 61  MAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSEKAAAK 136
           IN VLLPKKS    A+
Sbjct: 121 INSVLLPKKSATKPAE 136

[Close]

BLAST of Bhi08G000330 vs. TAIR10
Match: AT5G27670.1 (histone H2A 7)

HSP 1 Score: 196.1 bits (497), Expect = 1.6e-50
Identity = 104/130 (80.00%), Postives = 115/130 (88.46%), Query Frame = 0


Query: 6   KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYMAAVLE 65
           K  +GAGGRK GG +KK VS+SVKAGLQFPVGRI RYLK GRYA R G+GAPVY+AAVLE
Sbjct: 9   KPTRGAGGRK-GGDRKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLE 68

Query: 66  YLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLL 125
           YLAAEVLELAGNAARDNKKNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLL
Sbjct: 69  YLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLL 128

Query: 126 PKKSEKAAAK 136
           PKKS  ++++
Sbjct: 129 PKKSTASSSQ 137

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BLAST of Bhi08G000330 vs. TAIR10
Match: AT3G20670.1 (histone H2A 13)

HSP 1 Score: 174.5 bits (441), Expect = 5.1e-44
Identity = 89/120 (74.17%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 10  GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYMAAVLEYLAA 69
           G G   G G  KK  SRS KAGLQFPVGRI R+LK+G+YA RVG GAPVY+AAVLEYLAA
Sbjct: 3   GRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAA 62

Query: 70  EVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 129
           EVLELAGNAARDNKK RI+PRH+ LA+RNDEEL KLL  VTIA+GGV+PNI+ +LLPKK+
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKA 122

[Close]

BLAST of Bhi08G000330 vs. TAIR10
Match: AT4G27230.1 (histone H2A 2)

HSP 1 Score: 174.5 bits (441), Expect = 5.1e-44
Identity = 89/120 (74.17%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 10  GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYMAAVLEYLAA 69
           G G + G G  KK  SRS KAGLQFPVGRI R+LK G+YA RVG GAPVY+AAVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 70  EVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 129
           EVLELAGNAARDNKK RI+PRH+ LA+RNDEEL KLL  VTIA+GGV+PNI+ +LLPKK+
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

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BLAST of Bhi08G000330 vs. TrEMBL
Match: tr|A0A1S3C5R1|A0A1S3C5R1_CUCME (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103497210 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 8.3e-65
Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK+GRYARRVGTGAPVY+
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKAAAK 136
           NPVLLPKKSEKA  K
Sbjct: 121 NPVLLPKKSEKATTK 135

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BLAST of Bhi08G000330 vs. TrEMBL
Match: tr|A0A0A0LV77|A0A0A0LV77_CUCSA (Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_1G481210 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 8.3e-65
Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK+GRYARRVGTGAPVY+
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKAAAK 136
           NPVLLPKKSEKA  K
Sbjct: 121 NPVLLPKKSEKATTK 135

[Close]

BLAST of Bhi08G000330 vs. TrEMBL
Match: tr|A0A2G9H1N3|A0A2G9H1N3_9LAMI (Histone H2A OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16201 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 7.0e-64
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK GRY+ RVGTGAPVYM
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSERVGTGAPVYM 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKAA 134
           NPVLLPKKSEKAA
Sbjct: 121 NPVLLPKKSEKAA 133

[Close]

BLAST of Bhi08G000330 vs. TrEMBL
Match: tr|A0A2G9H340|A0A2G9H340_9LAMI (Histone H2A OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12301 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 9.1e-64
Identity = 128/135 (94.81%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           METGGK+KKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK GRY+ RVGTGAPVYM
Sbjct: 1   METGGKMKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSERVGTGAPVYM 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKAAAK 136
           NPVLLPKKSEKAA++
Sbjct: 121 NPVLLPKKSEKAASE 135

[Close]

BLAST of Bhi08G000330 vs. TrEMBL
Match: tr|M5W1N0|M5W1N0_PRUPE (Histone H2A OS=Prunus persica OX=3760 GN=PRUPE_6G082300 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.0e-63
Identity = 127/135 (94.07%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           METGGK+KKGAGGRKGGGPKKKPV+RSVKAGLQFPVGRIGRYLK GRYA+RVG+GAPVY+
Sbjct: 1   METGGKVKKGAGGRKGGGPKKKPVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRH+LLA+RNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKAAAK 136
           NPVLLPKKSEKAAAK
Sbjct: 121 NPVLLPKKSEKAAAK 135

[Close]

BLAST of Bhi08G000330 vs. NCBI nr
Match: XP_004149043.1 (PREDICTED: histone H2A [Cucumis sativus] >XP_008457544.1 PREDICTED: histone H2A [Cucumis melo] >KGN65668.1 hypothetical protein Csa_1G481210 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64
Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK+GRYARRVGTGAPVY+
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKAAAK 136
           NPVLLPKKSEKA  K
Sbjct: 121 NPVLLPKKSEKATTK 135

[Close]

BLAST of Bhi08G000330 vs. NCBI nr
Match: XP_022134450.1 (histone H2A-like [Momordica charantia])

HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64
Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK+GRYARRVGTGAPVY+
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKAAAK 136
           NPVLLPKKSEKA  K
Sbjct: 121 NPVLLPKKSEKAVTK 135

[Close]

BLAST of Bhi08G000330 vs. NCBI nr
Match: XP_015899482.1 (histone H2A-like [Ziziphus jujuba])

HSP 1 Score: 253.4 bits (646), Expect = 4.7e-64
Identity = 129/135 (95.56%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK GRY++RVGTGAPVY+
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKAAAK 136
           NPVLLPKK+EKAAAK
Sbjct: 121 NPVLLPKKTEKAAAK 135

[Close]

BLAST of Bhi08G000330 vs. NCBI nr
Match: XP_022997818.1 (histone H2A-like [Cucurbita maxima] >XP_023523186.1 histone H2A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.1 bits (645), Expect = 6.2e-64
Identity = 130/135 (96.30%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           M+  GKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK+GRYARRVGTGAPVYM
Sbjct: 1   MDASGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYM 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKAAAK 136
           NPVLLPKKSEKAA+K
Sbjct: 121 NPVLLPKKSEKAASK 135

[Close]

BLAST of Bhi08G000330 vs. NCBI nr
Match: XP_022949405.1 (histone H2A-like [Cucurbita moschata])

HSP 1 Score: 252.7 bits (644), Expect = 8.1e-64
Identity = 130/135 (96.30%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60
           M+T  KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK+GRYARRVGTGAPVYM
Sbjct: 1   MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYM 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKAAAK 136
           NPVLLPKKSEKAA+K
Sbjct: 121 NPVLLPKKSEKAASK 135

The following BLAST results are available for this feature:

BLAST of Bhi08G000330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M531\|H2A_EUPES	1.6e-63	92.54	Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1	[more]
sp\|Q9LZ46\|H2A4_ARATH	6.3e-60	87.41	Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1	[more]
sp\|Q2HU65\|H2A2_MEDTR	1.8e-59	87.12	Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 P...	[more]
sp\|A2WQG7\|H2A5_ORYSI	1.2e-58	90.91	Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3...	[more]
sp\|Q94E96\|H2A5_ORYSJ	1.2e-58	90.91	Probable histone H2A.5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0502700 ...	[more]

BLAST of Bhi08G000330 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G02560.2	4.0e-57	74.21	histone H2A 12	[more]
AT5G59870.1	1.0e-52	80.15	histone H2A 6	[more]
AT5G27670.1	1.6e-50	80.00	histone H2A 7	[more]
AT3G20670.1	5.1e-44	74.17	histone H2A 13	[more]
AT4G27230.1	5.1e-44	74.17	histone H2A 2	[more]

BLAST of Bhi08G000330 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C5R1\|A0A1S3C5R1_CUCME	8.3e-65	97.04	Histone H2A OS=Cucumis melo OX=3656 GN=LOC103497210 PE=3 SV=1	[more]
tr\|A0A0A0LV77\|A0A0A0LV77_CUCSA	8.3e-65	97.04	Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_1G481210 PE=3 SV=1	[more]
tr\|A0A2G9H1N3\|A0A2G9H1N3_9LAMI	7.0e-64	96.99	Histone H2A OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16201 PE=3 SV=1	[more]
tr\|A0A2G9H340\|A0A2G9H340_9LAMI	9.1e-64	94.81	Histone H2A OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12301 PE=3 SV=1	[more]
tr\|M5W1N0\|M5W1N0_PRUPE	2.0e-63	94.07	Histone H2A OS=Prunus persica OX=3760 GN=PRUPE_6G082300 PE=3 SV=1	[more]

BLAST of Bhi08G000330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149043.1	1.2e-64	97.04	PREDICTED: histone H2A [Cucumis sativus] >XP_008457544.1 PREDICTED: histone H2A ...	[more]
XP_022134450.1	1.2e-64	97.04	histone H2A-like [Momordica charantia]	[more]
XP_015899482.1	4.7e-64	95.56	histone H2A-like [Ziziphus jujuba]	[more]
XP_022997818.1	6.2e-64	96.30	histone H2A-like [Cucurbita maxima] >XP_023523186.1 histone H2A-like [Cucurbita ...	[more]
XP_022949405.1	8.1e-64	96.30	histone H2A-like [Cucurbita moschata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0000786	nucleosome

Vocabulary: **INTERPRO**
Term	Definition
IPR032458	Histone_H2A_CS
IPR032454	Histone_H2A_C
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold
IPR002119	Histone_H2A

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0008150	biological_process
biological_process	GO:0006342	chromatin silencing
cellular_component	GO:0000790	nuclear chromatin
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000330	Bhi08M000330	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 80..94 score: 73.78 coord: 66..79 score: 89.46 coord: 51..66 score: 82.86 coord: 108..126 score: 75.79 coord: 22..44 score: 69.23
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 11..131 e-value: 8.7E-80 score: 281.1
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 23..128 e-value: 1.49641E-63 score: 192.165
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 10..137 e-value: 2.1E-62 score: 210.7
IPR009072	Histone-fold	SUPERFAMILY	SSF47113	Histone-fold	coord: 13..135
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 20..97 e-value: 1.3E-11 score: 44.9
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 100..133 e-value: 3.5E-19 score: 68.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..153
None	No IPR available	PANTHER	PTHR23430:SF125	SUBFAMILY NOT NAMED	coord: 4..152
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 4..152
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 30..36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G000330	Csa1G481210	Cucumber (Chinese Long) v2	cuwgoB041
Bhi08G000330	MELO3C020706	Melon (DHL92) v3.5.1	mewgoB183
Bhi08G000330	ClCG03G001930	Watermelon (Charleston Gray)	wcgwgoB354
Bhi08G000330	CSPI01G22460	Wild cucumber (PI 183967)	cpiwgoB041
Bhi08G000330	Cucsa.213450	Cucumber (Gy14) v1	cgywgoB441
Bhi08G000330	CmaCh13G001570	Cucurbita maxima (Rimu)	cmawgoB0272
Bhi08G000330	CmaCh01G005640	Cucurbita maxima (Rimu)	cmawgoB0589
Bhi08G000330	CmoCh01G005910	Cucurbita moschata (Rifu)	cmowgoB0586
Bhi08G000330	CmoCh13G001610	Cucurbita moschata (Rifu)	cmowgoB0266
Bhi08G000330	Lsi02G013960	Bottle gourd (USVL1VR-Ls)	lsiwgoB259
Bhi08G000330	Cp4.1LG20g08780	Cucurbita pepo (Zucchini)	cpewgoB0636
Bhi08G000330	Cp4.1LG02g13170	Cucurbita pepo (Zucchini)	cpewgoB0708
Bhi08G000330	MELO3C020706.2	Melon (DHL92) v3.6.1	medwgoB186
Bhi08G000330	Carg12336	Silver-seed gourd	carwgoB0533
Bhi08G000330	Carg21033	Silver-seed gourd	carwgoB0860
Bhi08G000330	CsaV3_1G033640	Cucumber (Chinese Long) v3	cucwgoB044
Bhi08G000330	Cla008284	Watermelon (97103) v1	wgowmB485
Bhi08G000330	Cla97C03G052950	Watermelon (97103) v2	wgowmbB484

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G000330	Cucumber (Gy14) v2	cgybwgoB038
Bhi08G000330	Bottle gourd (USVL1VR-Ls)	lsiwgoB093
Bhi08G000330	Watermelon (Charleston Gray)	wcgwgoB317
Bhi08G000330	Watermelon (97103) v2	wgowmbB469
Bhi08G000330	Watermelon (97103) v1	wgowmB522