Bhi07G000717 (gene) Wax gourd

Overview
NameBhi07G000717
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr7 : 28807620 .. 28808163 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCAAACTCCACTGTGTTAGTCATTTTTGTTATCTTGTCGATGACTCTACGATACGCTACTCTCCTCTTCTTTCTTTTGGTTTTGACTTCTTCTTTTATAATTATGGTAACGTCTAGAGCCATACCTGTTCCAGTCACGTCTGCTGAAGTACCTACTTCAACAATGGACGCAAAATCTTTACCATCAATGTCATCTGAAGCTATGTTTGTTGCGGAATATGACTCATCAGTTTCCATGCCTCCAAGTTTTGGTGACTTTGTTGCTTTTAAAGTTCCTAGTGGAATGGGTGCAATTCCACCAATGCCCAATTGGGTAATTCGAAGTTGTAAACCTAAAGGTCGAATGAGGTATTCTGCTCCCAGTGATCGTAGAAACAGTGAGCCTCTTGTCTCAATTGTATGTTCAAACATGCCATAAAAAGTTAAATTACAAATATCAAAAGTCTTATACACACGTATTTAATACTACCTATTTTCTCTTTGTACTTGTGTTAATTCTCAAAGTGTTTATGTATAATGTAAAGCCCAATTACTATAGAAGCC

mRNA sequence

AATCAAACTCCACTGTGTTAGTCATTTTTGTTATCTTGTCGATGACTCTACGATACGCTACTCTCCTCTTCTTTCTTTTGGTTTTGACTTCTTCTTTTATAATTATGGTAACGTCTAGAGCCATACCTGTTCCAGTCACGTCTGCTGAAGTACCTACTTCAACAATGGACGCAAAATCTTTACCATCAATGTCATCTGAAGCTATGTTTGTTGCGGAATATGACTCATCAGTTTCCATGCCTCCAAGTTTTGGTGACTTTGTTGCTTTTAAAGTTCCTAGTGGAATGGGTGCAATTCCACCAATGCCCAATTGGGTAATTCGAAGTTGTAAACCTAAAGGTCGAATGAGGTATTCTGCTCCCAGTGATCGTAGAAACAGTGAGCCTCTTGTCTCAATTGTATGTTCAAACATGCCATAAAAAGTTAAATTACAAATATCAAAAGTCTTATACACACGTATTTAATACTACCTATTTTCTCTTTGTACTTGTGTTAATTCTCAAAGTGTTTATGTATAATGTAAAGCCCAATTACTATAGAAGCC

Coding sequence (CDS)

ATGACTCTACGATACGCTACTCTCCTCTTCTTTCTTTTGGTTTTGACTTCTTCTTTTATAATTATGGTAACGTCTAGAGCCATACCTGTTCCAGTCACGTCTGCTGAAGTACCTACTTCAACAATGGACGCAAAATCTTTACCATCAATGTCATCTGAAGCTATGTTTGTTGCGGAATATGACTCATCAGTTTCCATGCCTCCAAGTTTTGGTGACTTTGTTGCTTTTAAAGTTCCTAGTGGAATGGGTGCAATTCCACCAATGCCCAATTGGGTAATTCGAAGTTGTAAACCTAAAGGTCGAATGAGGTATTCTGCTCCCAGTGATCGTAGAAACAGTGAGCCTCTTGTCTCAATTGTATGTTCAAACATGCCATAA

Protein sequence

MTLRYATLLFFLLVLTSSFIIMVTSRAIPVPVTSAEVPTSTMDAKSLPSMSSEAMFVAEYDSSVSMPPSFGDFVAFKVPSGMGAIPPMPNWVIRSCKPKGRMRYSAPSDRRNSEPLVSIVCSNMP
Homology
[Close]
BLAST of Bhi07G000717 vs. TrEMBL
Match: tr|A0A0A0KRI3|A0A0A0KRI3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622650 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 65/87 (74.71%), Postives = 72/87 (82.76%), Query Frame = 0 

Query: 42  MDAK-SLPSMSSEAMFVAEYDSSV--SMPPSFGDFVAFKVPSGMG-AIPPMPNWVIRSCK 101
           +DAK S P   SEA  VA + SS+  SMPPSFGDFVAF+VPS +  A PPMP+W+IRSCK
Sbjct: 16  IDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCK 75

Query: 102 PKGRMRYSAPSDRRNSEPLVSIVCSNM 125
           PKGRMRYSAPSDRRNSEPLVSIVCSNM
Sbjct: 76  PKGRMRYSAPSDRRNSEPLVSIVCSNM 102

[Close]
BLAST of Bhi07G000717 vs. NCBI nr
Match: KGN52250.1 (hypothetical protein Csa_5G622650 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 1.9e-23
Identity = 65/87 (74.71%), Postives = 72/87 (82.76%), Query Frame = 0 

Query: 42  MDAK-SLPSMSSEAMFVAEYDSSV--SMPPSFGDFVAFKVPSGMG-AIPPMPNWVIRSCK 101
           +DAK S P   SEA  VA + SS+  SMPPSFGDFVAF+VPS +  A PPMP+W+IRSCK
Sbjct: 16  IDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCK 75

Query: 102 PKGRMRYSAPSDRRNSEPLVSIVCSNM 125
           PKGRMRYSAPSDRRNSEPLVSIVCSNM
Sbjct: 76  PKGRMRYSAPSDRRNSEPLVSIVCSNM 102

The following BLAST results are available for this feature:
BLAST of Bhi07G000717 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi07G000717 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi07G000717 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KRI3|A0A0A0KRI3_CUCSA1.3e-2374.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622650 PE=4 SV=1[more]
BLAST of Bhi07G000717 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52250.11.9e-2374.71hypothetical protein Csa_5G622650 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M000717Bhi07M000717mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi07G000717Csa5G622650Cucumber (Chinese Long) v2cuwgoB501
Bhi07G000717ClCG05G021190Watermelon (Charleston Gray)wcgwgoB469
Bhi07G000717CSPI05G26940Wild cucumber (PI 183967)cpiwgoB506
Bhi07G000717CmoCh18G009100Cucurbita moschata (Rifu)cmowgoB0540
Bhi07G000717Lsi04G000860Bottle gourd (USVL1VR-Ls)lsiwgoB387
Bhi07G000717Cp4.1LG09g04040Cucurbita pepo (Zucchini)cpewgoB0055
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi07G000717Wax gourdwgowgoB086
Bhi07G000717Cucumber (Gy14) v1cgywgoB620
Bhi07G000717Cucumber (Gy14) v2cgybwgoB477
Bhi07G000717Cucurbita maxima (Rimu)cmawgoB0544
Bhi07G000717Cucurbita maxima (Rimu)cmawgoB0895
Bhi07G000717Cucurbita maxima (Rimu)cmawgoB0903
Bhi07G000717Cucurbita moschata (Rifu)cmowgoB0894
Bhi07G000717Cucurbita moschata (Rifu)cmowgoB0904
Bhi07G000717Cucurbita pepo (Zucchini)cpewgoB0259
Bhi07G000717Cucurbita pepo (Zucchini)cpewgoB0560
Bhi07G000717Cucurbita pepo (Zucchini)cpewgoB0569
Bhi07G000717Cucumber (Chinese Long) v3cucwgoB513
Bhi07G000717Bottle gourd (USVL1VR-Ls)lsiwgoB618
Bhi07G000717Melon (DHL92) v3.6.1medwgoB081
Bhi07G000717Melon (DHL92) v3.6.1medwgoB361
Bhi07G000717Melon (DHL92) v3.5.1mewgoB081
Bhi07G000717Melon (DHL92) v3.5.1mewgoB361
Bhi07G000717Watermelon (Charleston Gray)wcgwgoB647
Bhi07G000717Watermelon (97103) v2wgowmbB532
Bhi07G000717Watermelon (97103) v2wgowmbB541
Bhi07G000717Watermelon (97103) v1wgowmB539
Bhi07G000717Watermelon (97103) v1wgowmB552
Bhi07G000717Silver-seed gourdcarwgoB0588
Bhi07G000717Silver-seed gourdcarwgoB0809
Bhi07G000717Silver-seed gourdcarwgoB0979