Bhi06G000626 (gene) Wax gourd

Overview
NameBhi06G000626
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionRING-H2 finger protein
Locationchr6 : 16907682 .. 16908197 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGACACCGACGCCACAATTTACAGCCGAAAACTCGACATTTTCCTCGTCGCAATTGGCTCCGCTGGCGCCGTCGTCACCATTTACCACTGCATCATGGCTTGTTGGTGCGATCGCCGCCGCTTCAACTCCGGTGGCCAAACACCGGCAAACGACCCTCACTCCTTGCCGATTACGGATACGCCGCGGAGCACCGAGAATTCGGTGGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCGAATGGCGGTGGACGGCGGGGGTTGCGGTGGAGATCACGGCGAAGGGGATGGCACGTGCGCGATTTGTTTGAGTGAATTTGAAGAAGGGGAGGAAATAAAGACGTTGCCGGAGTGTATGCATTCGTATCACGTGCCGTGTATCGACATGTGGCTTTACTCTCACTCGAGCTGTCCGATGTGTCGTACTAATGCTACTCCGACGTCGTTTCATGATAGGCTGCAGTTTGAAACGCAGCCGAGTTCTGGGATTGTTGTGCACGTGCTTCCATGA

mRNA sequence

ATGTCAGACACCGACGCCACAATTTACAGCCGAAAACTCGACATTTTCCTCGTCGCAATTGGCTCCGCTGGCGCCGTCGTCACCATTTACCACTGCATCATGGCTTGTTGGTGCGATCGCCGCCGCTTCAACTCCGGTGGCCAAACACCGGCAAACGACCCTCACTCCTTGCCGATTACGGATACGCCGCGGAGCACCGAGAATTCGGTGGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCGAATGGCGGTGGACGGCGGGGGTTGCGGTGGAGATCACGGCGAAGGGGATGGCACGTGCGCGATTTGTTTGAGTGAATTTGAAGAAGGGGAGGAAATAAAGACGTTGCCGGAGTGTATGCATTCGTATCACGTGCCGTGTATCGACATGTGGCTTTACTCTCACTCGAGCTGTCCGATGTGTCGTACTAATGCTACTCCGACGTCGTTTCATGATAGGCTGCAGTTTGAAACGCAGCCGAGTTCTGGGATTGTTGTGCACGTGCTTCCATGA

Coding sequence (CDS)

ATGTCAGACACCGACGCCACAATTTACAGCCGAAAACTCGACATTTTCCTCGTCGCAATTGGCTCCGCTGGCGCCGTCGTCACCATTTACCACTGCATCATGGCTTGTTGGTGCGATCGCCGCCGCTTCAACTCCGGTGGCCAAACACCGGCAAACGACCCTCACTCCTTGCCGATTACGGATACGCCGCGGAGCACCGAGAATTCGGTGGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCGAATGGCGGTGGACGGCGGGGGTTGCGGTGGAGATCACGGCGAAGGGGATGGCACGTGCGCGATTTGTTTGAGTGAATTTGAAGAAGGGGAGGAAATAAAGACGTTGCCGGAGTGTATGCATTCGTATCACGTGCCGTGTATCGACATGTGGCTTTACTCTCACTCGAGCTGTCCGATGTGTCGTACTAATGCTACTCCGACGTCGTTTCATGATAGGCTGCAGTTTGAAACGCAGCCGAGTTCTGGGATTGTTGTGCACGTGCTTCCATGA

Protein sequence

MSDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITDTPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP
Homology
[Close]
BLAST of Bhi06G000626 vs. Swiss-Prot
Match: sp|P93823|ATL1_ARATH (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.3e-16
Identity = 43/137 (31.39%), Postives = 73/137 (53.28%), Query Frame = 0 

Query: 20  IGSAGAVVTIYHCIMACWCD-------RRRFNSGGQTP--ANDPHSLPITDTPRSTENSV 79
           + +A  +V+ Y  ++ C  +       RRR  S  Q P     PH     +  R  + S 
Sbjct: 52  LATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPH-----EVNRGLDESA 111

Query: 80  VHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHVPCID 139
           +  IP  K++KR  V G     D  +    C++CL+EF+E E+++ +P C H +H+ CID
Sbjct: 112 IRAIPVFKFKKRDVVAG---EEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCID 171

Query: 140 MWLYSHSSCPMCRTNAT 148
           +WL  +++CP+CRT+ +
Sbjct: 172 IWLQGNANCPLCRTSVS 180

[Close]
BLAST of Bhi06G000626 vs. Swiss-Prot
Match: sp|O22755|ATL44_ARATH (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-15
Identity = 50/147 (34.01%), Postives = 70/147 (47.62%), Query Frame = 0 

Query: 3   DTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITDT 62
           ++D  +    L   L+ +    AVV         W   RRF +GG +P+ +         
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVV------RCAWL--RRFTAGGDSPSPN--------- 84

Query: 63  PRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGT-CAICLSEFEEGEEIKTLPECM 122
            +  +   +  +P   +    +  G        EGD T CAICL++F +GEEI+ LP C 
Sbjct: 85  -KGLKKKALQSLPRSTFTAAESTSGAAA----EEGDSTECAICLTDFADGEEIRVLPLCG 144

Query: 123 HSYHVPCIDMWLYSHSSCPMCRTNATP 149
           HS+HV CID WL S SSCP CR   TP
Sbjct: 145 HSFHVECIDKWLVSRSSCPSCRRILTP 149

[Close]
BLAST of Bhi06G000626 vs. Swiss-Prot
Match: sp|Q9LF64|ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.0e-15
Identity = 43/125 (34.40%), Postives = 65/125 (52.00%), Query Frame = 0 

Query: 30  YHCIMACWCDRRRFNSGGQT-PANDPHSLPITDTPRSTEN------SVVHLIPAHKYEKR 89
           Y+ +++ +C R    S  +T   N       + T R + N      S++  I  +KY+  
Sbjct: 74  YYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYK-- 133

Query: 90  MAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHVPCIDMWLYSHSSCPMC 148
                    GD       C++CLSEFEE E ++ LP+C H++H+PCID WL SHS+CP+C
Sbjct: 134 --------SGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLC 188

[Close]
BLAST of Bhi06G000626 vs. Swiss-Prot
Match: sp|Q9LSW9|ATL16_ARATH (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.5e-14
Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 64  RSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGD----GTCAICLSEFEEGEEIKTLPE 123
           R  + SV+  IP  K++KR   + G   G+  E +      C++CLSEF++ E+++ +P 
Sbjct: 97  RGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPN 156

Query: 124 CMHSYHVPCIDMWLYSHSSCPMCRTNAT-PTSF 152
           C H +H+ CID+WL ++++CP+CRT  +  TSF
Sbjct: 157 CSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189

[Close]
BLAST of Bhi06G000626 vs. Swiss-Prot
Match: sp|Q9SRQ8|ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 7.7e-14
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 0 

Query: 67  ENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHV 126
           + S++  I  +KY K   +DG     D       C++CLSEF+E E ++ LP+C H++HV
Sbjct: 135 DESLIKSITVYKYRK---MDGFVESSD-------CSVCLSEFQENESLRLLPKCNHAFHV 194

Query: 127 PCIDMWLYSHSSCPMCR 144
           PCID WL SHS+CP+CR
Sbjct: 195 PCIDTWLKSHSNCPLCR 201

[Close]
BLAST of Bhi06G000626 vs. TAIR10
Match: AT1G04360.1 (RING/U-box superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.5e-17
Identity = 43/137 (31.39%), Postives = 73/137 (53.28%), Query Frame = 0 

Query: 20  IGSAGAVVTIYHCIMACWCD-------RRRFNSGGQTP--ANDPHSLPITDTPRSTENSV 79
           + +A  +V+ Y  ++ C  +       RRR  S  Q P     PH     +  R  + S 
Sbjct: 52  LATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPH-----EVNRGLDESA 111

Query: 80  VHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHVPCID 139
           +  IP  K++KR  V G     D  +    C++CL+EF+E E+++ +P C H +H+ CID
Sbjct: 112 IRAIPVFKFKKRDVVAG---EEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCID 171

Query: 140 MWLYSHSSCPMCRTNAT 148
           +WL  +++CP+CRT+ +
Sbjct: 172 IWLQGNANCPLCRTSVS 180

[Close]
BLAST of Bhi06G000626 vs. TAIR10
Match: AT2G17450.1 (RING-H2 finger A3A)

HSP 1 Score: 84.3 bits (207), Expect = 7.7e-17
Identity = 50/147 (34.01%), Postives = 70/147 (47.62%), Query Frame = 0 

Query: 3   DTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITDT 62
           ++D  +    L   L+ +    AVV         W   RRF +GG +P+ +         
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVV------RCAWL--RRFTAGGDSPSPN--------- 84

Query: 63  PRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGT-CAICLSEFEEGEEIKTLPECM 122
            +  +   +  +P   +    +  G        EGD T CAICL++F +GEEI+ LP C 
Sbjct: 85  -KGLKKKALQSLPRSTFTAAESTSGAAA----EEGDSTECAICLTDFADGEEIRVLPLCG 144

Query: 123 HSYHVPCIDMWLYSHSSCPMCRTNATP 149
           HS+HV CID WL S SSCP CR   TP
Sbjct: 145 HSFHVECIDKWLVSRSSCPSCRRILTP 149

[Close]
BLAST of Bhi06G000626 vs. TAIR10
Match: AT5G17600.1 (RING/U-box superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 5.0e-16
Identity = 43/125 (34.40%), Postives = 65/125 (52.00%), Query Frame = 0 

Query: 30  YHCIMACWCDRRRFNSGGQT-PANDPHSLPITDTPRSTEN------SVVHLIPAHKYEKR 89
           Y+ +++ +C R    S  +T   N       + T R + N      S++  I  +KY+  
Sbjct: 74  YYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYK-- 133

Query: 90  MAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHVPCIDMWLYSHSSCPMC 148
                    GD       C++CLSEFEE E ++ LP+C H++H+PCID WL SHS+CP+C
Sbjct: 134 --------SGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLC 188

[Close]
BLAST of Bhi06G000626 vs. TAIR10
Match: AT5G43420.1 (RING/U-box superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.5e-15
Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 64  RSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGD----GTCAICLSEFEEGEEIKTLPE 123
           R  + SV+  IP  K++KR   + G   G+  E +      C++CLSEF++ E+++ +P 
Sbjct: 97  RGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPN 156

Query: 124 CMHSYHVPCIDMWLYSHSSCPMCRTNAT-PTSF 152
           C H +H+ CID+WL ++++CP+CRT  +  TSF
Sbjct: 157 CSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189

[Close]
BLAST of Bhi06G000626 vs. TAIR10
Match: AT3G03550.1 (RING/U-box superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 4.2e-15
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 0 

Query: 67  ENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHV 126
           + S++  I  +KY K   +DG     D       C++CLSEF+E E ++ LP+C H++HV
Sbjct: 135 DESLIKSITVYKYRK---MDGFVESSD-------CSVCLSEFQENESLRLLPKCNHAFHV 194

Query: 127 PCIDMWLYSHSSCPMCR 144
           PCID WL SHS+CP+CR
Sbjct: 195 PCIDTWLKSHSNCPLCR 201

[Close]
BLAST of Bhi06G000626 vs. TrEMBL
Match: tr|A0A1S3C9L0|A0A1S3C9L0_CUCME (RING-H2 finger protein ATL52-like OS=Cucumis melo OX=3656 GN=LOC103498194 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 4.0e-84
Identity = 150/171 (87.72%), Postives = 158/171 (92.40%), Query Frame = 0 

Query: 2   SDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITD 61
           S  DA IYSRKLDIFL+AIGSAGAVVTIYHCIMACWCDRRRF SG Q+ ANDPH+LPITD
Sbjct: 4   STGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLPITD 63

Query: 62  TPRSTENSVVHLIPAHKYEKRMAVDGGGCG-GDHGEGDGTCAICLSEFEEGEEIKTLPEC 121
           TPRSTENSVVHLIPAHKYEKRMAVDGGG   G   +GDGTCAICLSEFEEGEEIKTLPEC
Sbjct: 64  TPRSTENSVVHLIPAHKYEKRMAVDGGGXXVGKDVDGDGTCAICLSEFEEGEEIKTLPEC 123

Query: 122 MHSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP 172
            HSYH+PCIDMWLYSHSSCPMCRTNATPTSF+DRLQF+TQP+SGIVVHVLP
Sbjct: 124 KHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLP 174

[Close]
BLAST of Bhi06G000626 vs. TrEMBL
Match: tr|A0A0A0KNT5|A0A0A0KNT5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G512950 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.2e-83
Identity = 150/170 (88.24%), Postives = 157/170 (92.35%), Query Frame = 0 

Query: 2   SDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITD 61
           S  DA IYSRKLDIFL+AIGSAGAVVTIYHCIMACWCDRRRF SG Q+  NDPH+LPITD
Sbjct: 4   STGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFLSGDQSSVNDPHTLPITD 63

Query: 62  TPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECM 121
           TPRSTENSVVHLIPAHKYEKRMAVDGGG GG   +GDGTCAICLSEFEEGEEIKTLPEC 
Sbjct: 64  TPRSTENSVVHLIPAHKYEKRMAVDGGG-GGKDVDGDGTCAICLSEFEEGEEIKTLPECK 123

Query: 122 HSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP 172
           HSYH+PCIDMWLYSHSSCPMCRTNATPTSF+DRLQFETQ +SGIVVHVLP
Sbjct: 124 HSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFETQSNSGIVVHVLP 172

[Close]
BLAST of Bhi06G000626 vs. TrEMBL
Match: tr|A0A1U8MML8|A0A1U8MML8_GOSHI (RING-H2 finger protein ATL52-like OS=Gossypium hirsutum OX=3635 GN=LOC107938196 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 84/161 (52.17%), Postives = 101/161 (62.73%), Query Frame = 0 

Query: 1   MSDTDA-TIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQT--PANDPHSL 60
           M D DA  + + +L + LV  GSA  V+TIYHCI   WC   R N+ GQT  P +D H L
Sbjct: 1   MGDDDAFNLQNTRLSVILVGFGSAALVITIYHCIAMGWCHHFR-NNRGQTSQPQHDHHHL 60

Query: 61  PITDTPR----------STENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSE 120
                 R          S ENS   LIPAHKY+K M +          + DG C++CLS+
Sbjct: 61  RHQQQQRVYGHEMMEIMSFENSTAELIPAHKYQKGMGL---------VDEDGMCSVCLSQ 120

Query: 121 FEEGEEIKTLPECMHSYHVPCIDMWLYSHSSCPMCRTNATP 149
           FEEGEE++TLPEC+HSYH PCIDMWLYSHSSCPMCRT+ATP
Sbjct: 121 FEEGEELRTLPECLHSYHAPCIDMWLYSHSSCPMCRTDATP 151

[Close]
BLAST of Bhi06G000626 vs. TrEMBL
Match: tr|A0A2P5PWP5|A0A2P5PWP5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD36423 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 84/161 (52.17%), Postives = 101/161 (62.73%), Query Frame = 0 

Query: 1   MSDTDA-TIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQT--PANDPHSL 60
           M D DA  + + +L + LV  GSA  V+TIYHCI   WC   R N+ GQT  P +D H L
Sbjct: 21  MGDDDAFNLQNTRLSVILVGFGSAALVITIYHCIAMGWCHHFR-NNRGQTSQPQHDHHHL 80

Query: 61  PITDTPR----------STENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSE 120
                 R          S ENS   LIPAHKY+K M +          + DG C++CLS+
Sbjct: 81  RHQQQQRVYGHEMMEIMSFENSTAELIPAHKYQKGMGL---------VDEDGMCSVCLSQ 140

Query: 121 FEEGEEIKTLPECMHSYHVPCIDMWLYSHSSCPMCRTNATP 149
           FEEGEE++TLPEC+HSYH PCIDMWLYSHSSCPMCRT+ATP
Sbjct: 141 FEEGEELRTLPECLHSYHAPCIDMWLYSHSSCPMCRTDATP 171

[Close]
BLAST of Bhi06G000626 vs. TrEMBL
Match: tr|V4TCG9|V4TCG9_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033620mg PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.1e-36
Identity = 76/148 (51.35%), Postives = 96/148 (64.86%), Query Frame = 0 

Query: 2   SDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITD 61
           +  ++ I   K+ + L+ +GSA  V+ IYHC    WC R   +   + PA  P    I  
Sbjct: 4   NSNNSYIDDNKIAVLLIGVGSAAFVIAIYHCTSVGWCSRGLRSGPRRRPAG-PLVHEIDA 63

Query: 62  TPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECM 121
           TP S ENS+  LIPAHKY K          G  G+ DG CA+CLSEFEEGEE++TLPEC+
Sbjct: 64  TPSSIENSMAQLIPAHKYHKGT--------GPVGDEDGMCAVCLSEFEEGEELRTLPECL 123

Query: 122 HSYHVPCIDMWLYSHSSCPMCRTNATPT 150
           HSYH PCIDMWLYSHS+CPMCR++ATP+
Sbjct: 124 HSYHAPCIDMWLYSHSNCPMCRSDATPS 142

[Close]
BLAST of Bhi06G000626 vs. NCBI nr
Match: XP_008458935.1 (PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 6.0e-84
Identity = 150/171 (87.72%), Postives = 158/171 (92.40%), Query Frame = 0 

Query: 2   SDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITD 61
           S  DA IYSRKLDIFL+AIGSAGAVVTIYHCIMACWCDRRRF SG Q+ ANDPH+LPITD
Sbjct: 4   STGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLPITD 63

Query: 62  TPRSTENSVVHLIPAHKYEKRMAVDGGGCG-GDHGEGDGTCAICLSEFEEGEEIKTLPEC 121
           TPRSTENSVVHLIPAHKYEKRMAVDGGG   G   +GDGTCAICLSEFEEGEEIKTLPEC
Sbjct: 64  TPRSTENSVVHLIPAHKYEKRMAVDGGGXXVGKDVDGDGTCAICLSEFEEGEEIKTLPEC 123

Query: 122 MHSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP 172
            HSYH+PCIDMWLYSHSSCPMCRTNATPTSF+DRLQF+TQP+SGIVVHVLP
Sbjct: 124 KHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLP 174

[Close]
BLAST of Bhi06G000626 vs. NCBI nr
Match: XP_004142830.1 (PREDICTED: RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN51288.1 hypothetical protein Csa_5G512950 [Cucumis sativus])

HSP 1 Score: 318.2 bits (814), Expect = 1.8e-83
Identity = 150/170 (88.24%), Postives = 157/170 (92.35%), Query Frame = 0 

Query: 2   SDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITD 61
           S  DA IYSRKLDIFL+AIGSAGAVVTIYHCIMACWCDRRRF SG Q+  NDPH+LPITD
Sbjct: 4   STGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFLSGDQSSVNDPHTLPITD 63

Query: 62  TPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECM 121
           TPRSTENSVVHLIPAHKYEKRMAVDGGG GG   +GDGTCAICLSEFEEGEEIKTLPEC 
Sbjct: 64  TPRSTENSVVHLIPAHKYEKRMAVDGGG-GGKDVDGDGTCAICLSEFEEGEEIKTLPECK 123

Query: 122 HSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP 172
           HSYH+PCIDMWLYSHSSCPMCRTNATPTSF+DRLQFETQ +SGIVVHVLP
Sbjct: 124 HSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFETQSNSGIVVHVLP 172

[Close]
BLAST of Bhi06G000626 vs. NCBI nr
Match: XP_022939139.1 (RING-H2 finger protein ATL52-like [Cucurbita moschata])

HSP 1 Score: 309.7 bits (792), Expect = 6.2e-81
Identity = 140/171 (81.87%), Postives = 155/171 (90.64%), Query Frame = 0 

Query: 1   MSDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPIT 60
           MS +DA +YS+KLDIFL+A+GSAGAVVTIYHCIMACWCDRRR N+G QTPAND HS+ + 
Sbjct: 1   MSSSDAAVYSQKLDIFLIAVGSAGAVVTIYHCIMACWCDRRRLNAGDQTPANDLHSMSLA 60

Query: 61  DTPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPEC 120
           +TPRSTENSVVHLIPAHKYEK+ AVD GGC     +GDGTCAICLSEFEEGEEI+TLPEC
Sbjct: 61  ETPRSTENSVVHLIPAHKYEKQKAVDSGGC-----DGDGTCAICLSEFEEGEEIRTLPEC 120

Query: 121 MHSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP 172
           +HSYHVPCIDMWLYSHSSCPMCRT+ATPTS HDRLQFETQPSSGI+VHV P
Sbjct: 121 LHSYHVPCIDMWLYSHSSCPMCRTDATPTSVHDRLQFETQPSSGIIVHVRP 166

[Close]
BLAST of Bhi06G000626 vs. NCBI nr
Match: XP_023551520.1 (probable E3 ubiquitin-protein ligase ATL44 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.4 bits (786), Expect = 3.1e-80
Identity = 139/171 (81.29%), Postives = 155/171 (90.64%), Query Frame = 0 

Query: 1   MSDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPIT 60
           MS +DA +YS+KLDIFL+A+GSAGAVVTIYHCIMACWCDRRR N+G QTPAND HS+ + 
Sbjct: 1   MSSSDAAVYSQKLDIFLIAVGSAGAVVTIYHCIMACWCDRRRLNAGDQTPANDLHSMSLA 60

Query: 61  DTPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPEC 120
           +TPRSTENSVVHLIPA+KYEK+ AVD GGC     +GDGTCAICLSEFEEGEEI+TLPEC
Sbjct: 61  ETPRSTENSVVHLIPAYKYEKQKAVDSGGC-----DGDGTCAICLSEFEEGEEIRTLPEC 120

Query: 121 MHSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP 172
           +HSYHVPCIDMWLYSHSSCPMCRT+ATPTS HDRLQFETQPSSGI+VHV P
Sbjct: 121 LHSYHVPCIDMWLYSHSSCPMCRTDATPTSVHDRLQFETQPSSGIIVHVRP 166

[Close]
BLAST of Bhi06G000626 vs. NCBI nr
Match: XP_022133587.1 (RING-H2 finger protein ATL51-like [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 4.2e-61
Identity = 126/177 (71.19%), Postives = 136/177 (76.84%), Query Frame = 0 

Query: 1   MSDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRR-FNSGGQTP-ANDPHSLP 60
           MS ++A  YS KLDIFL+A+GSAG VVTIYHCIMACWCDRRR    GGQTP A D HSLP
Sbjct: 6   MSPSEAIAYSHKLDIFLIAVGSAGIVVTIYHCIMACWCDRRRPSGGGGQTPAARDLHSLP 65

Query: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGE-GDGTCAICLSEFEEGEEIKTL 120
             +TPRSTENSVVHLIPAHKYEKRM         DH E GDGTCAICLSEFEEGE+++TL
Sbjct: 66  GLETPRSTENSVVHLIPAHKYEKRM---------DHLEVGDGTCAICLSEFEEGEDLRTL 125

Query: 121 PECMHSYHVPCIDMWLYSHSSCPMCRTNATPTS-----FHDRLQFETQPSSGIVVHV 170
           PECMHSYHVPCIDMWLYSHSSCPMCR +ATPT      F D L  E    S +VVHV
Sbjct: 126 PECMHSYHVPCIDMWLYSHSSCPMCRADATPTPSSPAVFRDGLDSE----SVVVVHV 169

The following BLAST results are available for this feature:
BLAST of Bhi06G000626 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P93823|ATL1_ARATH6.3e-1631.39RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1[more]
sp|O22755|ATL44_ARATH1.4e-1534.01Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT... [more]
sp|Q9LF64|ATL52_ARATH9.0e-1534.40RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1[more]
sp|Q9LSW9|ATL16_ARATH4.5e-1437.63RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1[more]
sp|Q9SRQ8|ATL51_ARATH7.7e-1445.45RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2[more]
BLAST of Bhi06G000626 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04360.13.5e-1731.39RING/U-box superfamily protein[more]
AT2G17450.17.7e-1734.01RING-H2 finger A3A[more]
AT5G17600.15.0e-1634.40RING/U-box superfamily protein[more]
AT5G43420.12.5e-1537.63RING/U-box superfamily protein[more]
AT3G03550.14.2e-1545.45RING/U-box superfamily protein[more]
BLAST of Bhi06G000626 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C9L0|A0A1S3C9L0_CUCME4.0e-8487.72RING-H2 finger protein ATL52-like OS=Cucumis melo OX=3656 GN=LOC103498194 PE=4 S... [more]
tr|A0A0A0KNT5|A0A0A0KNT5_CUCSA1.2e-8388.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G512950 PE=4 SV=1[more]
tr|A0A1U8MML8|A0A1U8MML8_GOSHI1.1e-3652.17RING-H2 finger protein ATL52-like OS=Gossypium hirsutum OX=3635 GN=LOC107938196 ... [more]
tr|A0A2P5PWP5|A0A2P5PWP5_GOSBA1.1e-3652.17Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD36423 PE=4 SV... [more]
tr|V4TCG9|V4TCG9_9ROSI3.1e-3651.35Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033620mg PE=4 ... [more]
BLAST of Bhi06G000626 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458935.16.0e-8487.72PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo][more]
XP_004142830.11.8e-8388.24PREDICTED: RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN51288.1 hypot... [more]
XP_022939139.16.2e-8181.87RING-H2 finger protein ATL52-like [Cucurbita moschata][more]
XP_023551520.13.1e-8081.29probable E3 ubiquitin-protein ligase ATL44 [Cucurbita pepo subsp. pepo][more]
XP_022133587.14.2e-6171.19RING-H2 finger protein ATL51-like [Momordica charantia][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
biological_process GO:0008150 biological_process
biological_process GO:0044267 cellular protein metabolic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M000626Bhi06M000626mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 101..142
e-value: 9.6E-7
score: 38.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 100..143
e-value: 7.2E-13
score: 48.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 101..143
score: 12.224
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 58..149
e-value: 3.2E-20
score: 73.5
NoneNo IPR availablePANTHERPTHR14155:SF144SUBFAMILY NOT NAMEDcoord: 1..150
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 1..150
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 100..148

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi06G000626Csa5G512950Cucumber (Chinese Long) v2cuwgoB473
Bhi06G000626MELO3C021656Melon (DHL92) v3.5.1mewgoB024
Bhi06G000626ClCG09G019980Watermelon (Charleston Gray)wcgwgoB017
Bhi06G000626CSPI05G17550Wild cucumber (PI 183967)cpiwgoB476
Bhi06G000626Cucsa.010620Cucumber (Gy14) v1cgywgoB389
Bhi06G000626CmoCh15G004120Cucurbita moschata (Rifu)cmowgoB0375
Bhi06G000626Lsi02G016550Bottle gourd (USVL1VR-Ls)lsiwgoB209
Bhi06G000626Cp4.1LG13g09380Cucurbita pepo (Zucchini)cpewgoB0240
Bhi06G000626CsGy5G017180Cucumber (Gy14) v2cgybwgoB450
Bhi06G000626MELO3C021656.2Melon (DHL92) v3.6.1medwgoB022
Bhi06G000626Carg02356Silver-seed gourdcarwgoB0340
Bhi06G000626Cla004681Watermelon (97103) v1wgowmB116
Bhi06G000626Cla97C09G181390Watermelon (97103) v2wgowmbB152
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi06G000626Cucumber (Gy14) v1cgywgoB008
Bhi06G000626Cucumber (Gy14) v1cgywgoB334
Bhi06G000626Cucumber (Gy14) v2cgybwgoB440
Bhi06G000626Cucurbita maxima (Rimu)cmawgoB0836
Bhi06G000626Cucurbita maxima (Rimu)cmawgoB0842
Bhi06G000626Cucurbita maxima (Rimu)cmawgoB0845
Bhi06G000626Cucurbita moschata (Rifu)cmowgoB0378
Bhi06G000626Cucurbita moschata (Rifu)cmowgoB0839
Bhi06G000626Cucurbita moschata (Rifu)cmowgoB0842
Bhi06G000626Cucurbita pepo (Zucchini)cpewgoB0505
Bhi06G000626Cucurbita pepo (Zucchini)cpewgoB0508
Bhi06G000626Wild cucumber (PI 183967)cpiwgoB466
Bhi06G000626Cucumber (Chinese Long) v3cucwgoB475
Bhi06G000626Cucumber (Chinese Long) v3cucwgoB485
Bhi06G000626Cucumber (Chinese Long) v2cuwgoB462
Bhi06G000626Cucumber (Chinese Long) v2cuwgoB469
Bhi06G000626Bottle gourd (USVL1VR-Ls)lsiwgoB212
Bhi06G000626Bottle gourd (USVL1VR-Ls)lsiwgoB355
Bhi06G000626Melon (DHL92) v3.6.1medwgoB028
Bhi06G000626Melon (DHL92) v3.5.1mewgoB030
Bhi06G000626Watermelon (Charleston Gray)wcgwgoB022
Bhi06G000626Watermelon (97103) v2wgowmbB157
Bhi06G000626Watermelon (97103) v1wgowmB120
Bhi06G000626Silver-seed gourdcarwgoB0802