Bhi04G001994 (gene) Wax gourd

Overview
NameBhi04G001994
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr4 : 66514037 .. 66514728 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGACAGGCGTACGTAAAAACCAAATTAACATACAAAATGCCTTTTATATCTTCCGAATCTCCAACTACACAAATAGCAAATACAGACAGATCAAACAAGATCCGCTTCAAAAAGAAATACAACACAAGAGGCGGCACAAACATCAGCAAGATTGTAGCAGCATCAGTTGGTAAGAATCTGGAATGAAAACGGAAGAGAGACATGAAAAAGAGGTTACCGAATCAGCCAGTGTAGATATGAACATGGAGAGCGAGAATGAAGACGGAGTAGAGGATGAAGAAGATAAGCGTGTGTATAGCGACAGCCTTGCCGTTGGTCTTCATGCTCCCGAACTCAAACTGCCGATTATTCCCCGGAAACTGAAACAGAAGCCCCGGCGAAAGCAGTACGAACAGTACAACTCCGATCACCACTGGTGCCCAATCCGACATACTTTCACAGATATCGTAATTCACAAAACGTCAAAAGAGAAATGAAAAGAGAAACTCAAAGTAGCAGACGTAAAGCGATTTGATCTGTGGAAAGAAAAAGAGAAAAAATGGCTTTGCAGTAACGCGATGAAGAAGAAGAAGAAGAGAAATGGAATTCAGCAGAGTTCACATTTTCTTTTACGCTTTAGTTCAGGATTCGAAAAATTGGGAATCCGAGAAGCTGTTGTTAATTACGAGATTGACACTGGTGAGTGA

mRNA sequence

ATGGAGGGACAGGCGTACGTAAAAACCAAATTAACATACAAAATGCCTTTTATATCTTCCGAATCTCCAACTACACAAATAGCAAATACAGACAGATCAAACAAGATCCGCTTCAAAAAGAAATACAACACAAGAGGCGGCACAAACATCAGCAAGATTGTAGCAGCATCAGTTGCCAGTGTAGATATGAACATGGAGAGCGAGAATGAAGACGGAGTAGAGGATGAAGAAGATAAGCGTGTGTATAGCGACAGCCTTGCCGTTGGTCTTCATGCTCCCGAACTCAAACTGCCGATTATTCCCCGGAAACTGAAACAGAAGCCCCGGCGAAAGCAGTACGAACAGTACAACTCCGATCACCACTGTAACGCGATGAAGAAGAAGAAGAAGAGAAATGGAATTCAGCAGAGTTCACATTTTCTTTTACGCTTTAGTTCAGGATTCGAAAAATTGGGAATCCGAGAAGCTGTTGTTAATTACGAGATTGACACTGGTGAGTGA

Coding sequence (CDS)

ATGGAGGGACAGGCGTACGTAAAAACCAAATTAACATACAAAATGCCTTTTATATCTTCCGAATCTCCAACTACACAAATAGCAAATACAGACAGATCAAACAAGATCCGCTTCAAAAAGAAATACAACACAAGAGGCGGCACAAACATCAGCAAGATTGTAGCAGCATCAGTTGCCAGTGTAGATATGAACATGGAGAGCGAGAATGAAGACGGAGTAGAGGATGAAGAAGATAAGCGTGTGTATAGCGACAGCCTTGCCGTTGGTCTTCATGCTCCCGAACTCAAACTGCCGATTATTCCCCGGAAACTGAAACAGAAGCCCCGGCGAAAGCAGTACGAACAGTACAACTCCGATCACCACTGTAACGCGATGAAGAAGAAGAAGAAGAGAAATGGAATTCAGCAGAGTTCACATTTTCTTTTACGCTTTAGTTCAGGATTCGAAAAATTGGGAATCCGAGAAGCTGTTGTTAATTACGAGATTGACACTGGTGAGTGA

Protein sequence

MEGQAYVKTKLTYKMPFISSESPTTQIANTDRSNKIRFKKKYNTRGGTNISKIVAASVASVDMNMESENEDGVEDEEDKRVYSDSLAVGLHAPELKLPIIPRKLKQKPRRKQYEQYNSDHHCNAMKKKKKRNGIQQSSHFLLRFSSGFEKLGIREAVVNYEIDTGE
Homology
[Close]
BLAST of Bhi04G001994 vs. TrEMBL
Match: tr|A0A0A0LT04|A0A0A0LT04_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406100 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.9e-14
Identity = 43/57 (75.44%), Postives = 50/57 (87.72%), Query Frame = 0 

Query: 65  MESENEDGVEDEEDKRVYSDSLAVGLHAPELKLPIIPRKLKQKPRRKQYEQYNSDHH 122
           MESENED +EDEED+ VYS+S ++GLHAP+LKL II RKLKQK RRKQYE+YNSD H
Sbjct: 1   MESENEDSIEDEEDESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDH 57

[Close]
BLAST of Bhi04G001994 vs. TrEMBL
Match: tr|A0A0B2R840|A0A0B2R840_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_040169 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-07
Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 50  ISKIVAASVASVDMNMESENEDGVEDEEDKRVYSDSLAVGLHAPELKLPIIPRKLKQKPR 109
           I +I     A VDM+   E+EDGVE EED+RV  +  AVGLHA ELKL  +PRK +++PR
Sbjct: 2   IPQIPGTGSAGVDMDFNGEDEDGVEREEDERVDENGFAVGLHATELKLLPVPRKGEKQPR 61

Query: 110 RKQYEQ-YNSDHHC 123
            +Q+EQ Y   + C
Sbjct: 62  LEQHEQNYPDQNRC 75

[Close]
BLAST of Bhi04G001994 vs. NCBI nr
Match: KGN63161.1 (hypothetical protein Csa_2G406100 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 43/57 (75.44%), Postives = 50/57 (87.72%), Query Frame = 0 

Query: 65  MESENEDGVEDEEDKRVYSDSLAVGLHAPELKLPIIPRKLKQKPRRKQYEQYNSDHH 122
           MESENED +EDEED+ VYS+S ++GLHAP+LKL II RKLKQK RRKQYE+YNSD H
Sbjct: 1   MESENEDSIEDEEDESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDH 57

[Close]
BLAST of Bhi04G001994 vs. NCBI nr
Match: KHN28289.1 (hypothetical protein glysoja_040169 [Glycine soja])

HSP 1 Score: 64.3 bits (155), Expect = 4.4e-07
Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 50  ISKIVAASVASVDMNMESENEDGVEDEEDKRVYSDSLAVGLHAPELKLPIIPRKLKQKPR 109
           I +I     A VDM+   E+EDGVE EED+RV  +  AVGLHA ELKL  +PRK +++PR
Sbjct: 2   IPQIPGTGSAGVDMDFNGEDEDGVEREEDERVDENGFAVGLHATELKLLPVPRKGEKQPR 61

Query: 110 RKQYEQ-YNSDHHC 123
            +Q+EQ Y   + C
Sbjct: 62  LEQHEQNYPDQNRC 75

The following BLAST results are available for this feature:
BLAST of Bhi04G001994 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi04G001994 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi04G001994 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LT04|A0A0A0LT04_CUCSA1.9e-1475.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406100 PE=4 SV=1[more]
tr|A0A0B2R840|A0A0B2R840_GLYSO2.9e-0750.00Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_040169 PE=4 SV=1[more]
BLAST of Bhi04G001994 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63161.12.9e-1475.44hypothetical protein Csa_2G406100 [Cucumis sativus][more]
KHN28289.14.4e-0750.00hypothetical protein glysoja_040169 [Glycine soja][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0031225 anchored component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001994Bhi04M001994mRNA