Bhi04G001278 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G001278
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Protein EPIDERMAL PATTERNING FACTOR
Location	chr4 : 40647087 .. 40652447 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAGATTAACATTTAAGTGTCATCTCTTCTATCTAAAACAATGTCAGTAGTTTTATTTGATGGCACTAATCTTTTTACTTTTTTTTAAAAAAAATTACGGTAATTAATGTTTAAATTGGGTTTTTGAATGGAATAGTCACCTCTATTTGAGTGTTTAAAAAATTGAATTCAAAATTTTGTGTTTTATATATGAATACTTTGTAGAGAATTTGTTATGTTTTGAGAATGAAAAGAATTGGAAGTTTTTTTGTTTTTATCTTAGAAAAGTTAGAAAATATGTGTATAGTTGAAAAATAAAATCAAAAATAGCAAAAAAAAAAAAAAAACAAAAAAACAAAAAAACAAAATCAATTCCATTCAAAAACAGCACCAAATACCCCAACTCAACTCAACTTAACTTAGCATCCAAACACAGACAATAATTACCAACTTAACTCAACTCTGCACACCAAACACAGACAATATAACTCTTTAGATAATTTAATGCTCCGGATAATAATTACCAACTCAACTATTTGCTTTTATCGCACATCAAACACCCCTAACAAATTTTTTTCTTTGTCCTTTTATATCCATAAGTGTCCGAATCACCTCAACTATCCTATCGAAATAGTTGTTTGACTTTCTTACATTTAGTTGCTACGGTACCTGTATAACCATTTATAGAAATTGAAAGTTCAAATTTCAATCTTTATATTGCAACAAATCCAAAAAATCATTGTGAATTTAACTCAAAAGAACCTAGGCAGATGGCATGATACCTTCTACAACACAGTAGAAACGGACAAATTTGAAAACAACTCAGCTTTCTAAAGGACGGGAGCAACAAACAAGAAATTAAGCCAGAAGTTTAATTGAGAGTATAGTCCTAACCTTTTAAAGGAAGTCTTGCTGTATCAGAAACTGACACATGCAGCAGAAGTTCATTCAATGCAAAGGGCTTCAGCTTCACGTTGAGGGCAGAGGGATTCTTCAATTTCAATAGCCCTCTGCCTTTCTGCTCCCTTCCTCCACGTGAGTTCCTTGTGTCGTGTAGCAACTAAAAGCCCCTGCACAACACATTACAACAAATAATATAGTCATTTCCCATTCACTTGGGACTATAATCTTTTCTACCTTCCTTGGTTGAAATTGGACACACAAATCTAGCTCAAGAGGCACCCACTATTCAGAGCTTTTACCTTTCCCTTTTATGGTATTATTCCGAATGGATGAGTGCATTTGGTTGGTAATCCAGAAACAGAAATGCCCCTTTTCTTCTGTAAACCCACAACCAAGACCTATCAACTCTATCAAAAATCTATCAAAAAACAAGAGAATGAAAACAAAGGGGATTTATCCTATAGTTTCTGTTTTAATTAAAATTCTAAGGAACACAAAAGAATCCTAACATAGCTCTAACATTGTTTAAAATTCACTACACCTAGAATTTCGCTTGTGGGAGGATTGTTGAGTGACTTGTAGAAGAATATTTGACCCAAAGAACTGGAAAGACTTGAGTTGTGAATTCCACTCCAAGGAGTTCGTAACCCACAACTAAAAAAACATCAATTTTATGCTTTATTAATTCCTTACAATGTGGACCCATGAGTTCACAACCTCTAGCATTCGCAACTCTCTAAAATTCACAACTCTAACACCCCTAAGTGTTTGGAATTTAACCATTGACAAGCAAACCCAAGATTTTGGATAGTTGTGCTGAGAGCTCTTGTGACATATTGACCGGAAGGAATGAAGATAGGATAAGTTACTTCGTTTTCGTTTTGATTCAATAGAACCTTTTACATAGCATGGTTTCTTAGAGGAGAAAGAGAGATCTGAAGAACCTATCAAGACAGGTCCTAATATTTTATTTTATTTTATTTAGAAAAAAATCCCAATAAATGCACGTCTCAAAAATAAACAGTCAATTAAATAAACGGATACAGAATTTCCCCATCTTATGTTGTCGGCAATAGCCACCTAGAAAATGACCGCTGATTAATAAACTGAAAATGAGTTTCAACCTTCGTCCACCTGTATGGAAAGCAATATTTATCAACACCTGAAAGCACAATGACTATAAATGAATCTAGCTACTAGTGCGATACATGAAGAGGAAAATGTAAAAGTAAAATCCACTAGTCGTCTCGTGACAAGGGACAGTGCCCTTAAATCTCAAAATGTCTCGACTTCATATTTATCCAAAATGCAGCAATTCAAAATTTGATCTATAAGAGTAAAAAATATGTGCCTTCGTACATATAAGATCGAGTGCCACAGTTCATTTAAAGTTTCTGAAGATGTTGAGTTTACTTGCCAAAACATGTGAATCTTCAAAACATGGCCGTGGATCATGTGAAGTGCAACAGACGTACATCTTCCTACATTAAAAACTAACCTTTTTTAGTTTACACTGTATAAAATGCCCACTACATACTAAATCATCTGTCACCAACATTTCCAACAAACTTTGCAATCTATTTTCTCCTCCTTTTGCTTCTACCACTCCTTATATCTTTTTGGCTCTTGCATTATCAAACAAAGATGAAAAGTTTCCCACTCGTGGCTCACACATCTATACTTTTCGGGATTTTCTTCATCATACTAATGAATGGCAGAAGCCTTGATGCAACAACTCGCTGGGATCACAGTAAGAAAAATCATCATCTATGCAGTTTATATTGTCAACTTGCTATTCTAGTGACTGGGAAAATGCATTCATATCCCCATAACGCATACATCAACATTTTACTCTGATATAGATAGCCATGGCATCTGAGCCTTTTGAGTGTGTGATGTTTCAGTGAGCTTTAATGCAGAAGATACTCACAGAGCAGTTGACAATTCAAGGCACGAGCAGGTATTGTGTGTTTTTAAGCTCACATTTCTCCACATAGTTTTAAACATTATGCGAGAAAATAACAAAAGCTCGCCTAATGGGGACAAGAATAGGAAAAATATGAATAATAGATGCTCCTTGTTGAACAAGACAAACCATGGCAACATGCTAACAGAAAAGAAAACTTTTTAAAGAACTTTACTGGAAGGGGAAAAAACAAACAAACAAAAACTTCATTCACTTTCTTTGTCATGTGTGCCTGTGCAGGAAAAAACTGAGGAAGTACTTGGTATGGAGTTATACCCTACAGGATCCAGCCTCCCAGACTGTTCCCATGCATGTGGACCATGTTTTCCGTGCAAAAGGGTGATGGTGAGCTTCAAATGCTCTGTTGCAGAGTCTTGTCCAACTGTCTACAAATGCATGTGTAAAGGGAAATATTATCACGTACCCTCCAATTGAGCTTCAATTCAATCTGGAGGAATATGCACCAAAGAACAAAGCAAATAATGATTTAATTAGCACTTAGCACTGAGGTGACTATTAATATATTGAAGACTGAGACTACATCCTCTGTTGAATTAGGGTTTATTTCCTTGTACTGGGATCATTCTGTATGAGAGTAACTGAGACAACTAATTTTCAAGCACATGAAGTTTAATTAGAAAGTTAGATGTTGGGGTTTTTTTCTACTACAGTCGTGTGCGATAACATTTTCATTGATATATTCTACTTGTAATGAGATCTGATTTATCCTGTTCCCCACCTTTCTAGGTTTTTAAAGTTGAGAATATACAGTTAAATGGACATCAGAAAAACAAACCAGAATAAGAGGATGGGCCAGTAAAGTTTGTGAAAGAGGGATACACTATGTTTTCAATTTCACCCCAAAAAGCATATGCATTCAGTCCAATAGGTAAAGTTTGGAAACTATCCAGCAGCCAGATAATAACCATAATAATAAATCCTTGGTTAATAAAGAAACGAACGGCAGAGTATCCTATCATAGAGCAAACGATATCAGAAATTAATGAAAACCTACTCTGAGGGAATTGTAGAAGAAGAGAAGAAAAGCATAATAAAAAGAAAACGACAATGGTAATTCAAACAGATGTTACACAACTGCACAGGCCTAAGCCATTCTGCACGTTATACATTTCAAAACTATCCAAGACACGTTACATACCAAATGGATTCTACTTCTATACCTCAAGCTCACTATTAGGCATGGAAAAATTGGCAATTGACAGGGGACACATTCAGCAAGAACCATATCTGTCAAAAGGATTGATCTTCGAAGGATATTACATCGAAATCCAATAAAAAATCCAAACTACATGAATCAAAATGATAACAGACAAAAGGATCGATCTTCTAAGTCGATTTATCTAGCCAGATAAGTTGCAGAAAAAGGCAATTCATGTCAACAAATCAATAATTACATATGCAAACAACTATCCAGACGATCGAAATCAAGAAAGGCAAACAGATATTACACAACTGCACAGGCTTAAGCCATTCTGCGTGATATACCTCAAGCTCATTATCGGGCATGGAAAAACTGGCAATTGGCAGGGGAGACATTTAGCAAGAACCATATCTGTCAAAAGGATCGATCTTCTAAGGATATTACATCGAAATCCAAACTACACGAATCAAAATGATAACAGACAAAATGATCGGTCTTCTAAGCCGATTTGTCTAACCAGATAAGTTGCAGAAAAAGGCAATTCATGTCAACAGATCAACAAACGATTATCCATACGATCGAAATCAAGAAAGGCAACACAAACTTTCAATTGGTAAAACGGTGGCCAATATACATCCACCTATAACAATTCGAATTGTAAGGAAAACCCCTTCGATCAGTTGTAACATATCGTTCGTCGAGCAGCAAATGTTGTCAATTACTTCGACACAAAAAACAAAGTATAATTAGATAATCTGACACTCAACCCGATTCTAAGAAAAAAGAAACACACACACGCGAATCCAGTAACCTTTCCAAACATCAGCTTTACATCTGAATCCGGACTATGAACTGACTCTACTGGAACCATCCCCGCCGTTTCCCCTAGAGCAACAAGGGTTTCCATTCCCATGATGGTGATTATCATCATCCTCCTGATCGCTGCCGTCCTCGTCAAAGGGTTTCTGCTTGTGGAATATACAGCACTTCTTCGAGCTCTTTTTCTGCATGAACTCGTTGTCGACGGTCCCTTCCTTCCATGAGACCTTCTTCTTCTTCCGATTGAGACGGAGAACTAGGGTTTCAGGGGGCTGAGAGGAAGAGGATCCGTTGGCCAAGATGACGGTGGTGGTGAGTGAAGGGGAGGAGGACGTTAATGCTCCGGCGGTGGTCATCGGTGCCCTAGCCATCTTTGATCAAGAGAATGAGAATTGGTAAAGACGGAGTCTGGGATGGCTTCTCTTTTTCATTTCCCAGTAGATGGAATAGTCGGTCTGCGCGTATCTCGATCCTTGCCGCCAAATGCCGATGTTTATATTCGAATATTCCATCCCTCGCTTTTTTTATTTT

mRNA sequence

TTAAGATTAACATTTAAGTGTCATCTCTTCTATCTAAAACAATGTCAGTAGTTTTATTTGATGGCACTAATCTTTTTACTTTTTTTTAAAAAAAATTACGGTAATTAATGTTTAAATTGGGTTTTTGAATGGAATAGTCACCTCTATTTGAGTGTTTAAAAAATTGAATTCAAAATTTTGTGTTTTATATATGAATACTTTGTAGAGAATTTGTTATGTTTTGAGAATGAAAAGAATTGGAAGTTTTTTTGTTTTTATCTTAGAAAAGTTAGAAAATATGTGTATAGTTGAAAAATAAAATCAAAAATAGCAAAAAAAAAAAAAAAACAAAAAAACAAAAAAACAAAATCAATTCCATTCAAAAACAGCACCAAATACCCCAACTCAACTCAACTTAACTTAGCATCCAAACACAGACAATAATTACCAACTTAACTCAACTCTGCACACCAAACACAGACAATATAACTCTTTAGATAATTTAATGCTCCGGATAATAATTACCAACTCAACTATTTGCTTTTATCGCACATCAAACACCCCTAACAAATTTTTTTCTTTGTCCTTTTATATCCATAAGTGTCCGAATCACCTCAACTATCCTATCGAAATAGTTGTTTGACTTTCTTACATTTAGTTGCTACGGTACCTGTATAACCATTTATAGAAATTGAAAGTTCAAATTTCAATCTTTATATTGCAACAAATCCAAAAAATCATTGTGAATTTAACTCAAAAGAACCTAGGCAGATGGCATGATACCTTCTACAACACAGTAGAAACGGACAAATTTGAAAACAACTCAGCTTTCTAAAGGACGGGAGCAACAAACAAGAAATTAAGCCAGAAGTTTAATTGAGAGTATAGTCCTAACCTTTTAAAGGAAGTCTTGCTGTATCAGAAACTGACACATGCAGCAGAAGTTCATTCAATGCAAAGGGCTTCAGCTTCACGTTGAGGGCAGAGGGATTCTTCAATTTCAATAGCCCTCTGCCTTTCTGCTCCCTTCCTCCACGTGAGTTCCTTGTGTCGTGTAGCAACTAAAAGCCCCTGCACAACACATTACAACAAATAATATAGTCATTTCCCATTCACTTGGGACTATAATCTTTTCTACCTTCCTTGGTTGAAATTGGACACACAAATCTAGCTCAAGAGGCACCCACTATTCAGAGCTTTTACCTTTCCCTTTTATGGTATTATTCCGAATGGATGAGTGCATTTGGTTGGTAATCCAGAAACAGAAATGCCCCTTTTCTTCTGTAAACCCACAACCAAGACCTATCAACTCTATCAAAAATCTATCAAAAAACAAGAGAATGAAAACAAAGGGGATTTATCCTATAGTTTCTGTTTTAATTAAAATTCTAAGGAACACAAAAGAATCCTAACATAGCTCTAACATTGTTTAAAATTCACTACACCTAGAATTTCGCTTGTGGGAGGATTGTTGAGTGACTTGTAGAAGAATATTTGACCCAAAGAACTGGAAAGACTTGAGTTGTGAATTCCACTCCAAGGAGTTCGTAACCCACAACTAAAAAAACATCAATTTTATGCTTTATTAATTCCTTACAATGTGGACCCATGAGTTCACAACCTCTAGCATTCGCAACTCTCTAAAATTCACAACTCTAACACCCCTAAGTGTTTGGAATTTAACCATTGACAAGCAAACCCAAGATTTTGGATAGTTGTGCTGAGAGCTCTTGTGACATATTGACCGGAAGGAATGAAGATAGGATAAGTTACTTCGTTTTCGTTTTGATTCAATAGAACCTTTTACATAGCATGGTTTCTTAGAGGAGAAAGAGAGATCTGAAGAACCTATCAAGACAGGTCCTAATATTTTATTTTATTTTATTTAGAAAAAAATCCCAATAAATGCACGTCTCAAAAATAAACAGTCAATTAAATAAACGGATACAGAATTTCCCCATCTTATGTTGTCGGCAATAGCCACCTAGAAAATGACCGCTGATTAATAAACTGAAAATGAGTTTCAACCTTCGTCCACCTGTATGGAAAGCAATATTTATCAACACCTGAAAGCACAATGACTATAAATGAATCTAGCTACTAGTGCGATACATGAAGAGGAAAATGTAAAAGTAAAATCCACTAGTCGTCTCGTGACAAGGGACAGTGCCCTTAAATCTCAAAATGTCTCGACTTCATATTTATCCAAAATGCAGCAATTCAAAATTTGATCTATAAGAGTAAAAAATATGTGCCTTCGTACATATAAGATCGAGTGCCACAGTTCATTTAAAGTTTCTGAAGATGTTGAGTTTACTTGCCAAAACATGTGAATCTTCAAAACATGGCCGTGGATCATGTGAAGTGCAACAGACGTACATCTTCCTACATTAAAAACTAACCTTTTTTAGTTTACACTGTATAAAATGCCCACTACATACTAAATCATCTGTCACCAACATTTCCAACAAACTTTGCAATCTATTTTCTCCTCCTTTTGCTTCTACCACTCCTTATATCTTTTTGGCTCTTGCATTATCAAACAAAGATGAAAAGTTTCCCACTCGTGGCTCACACATCTATACTTTTCGGGATTTTCTTCATCATACTAATGAATGGCAGAAGCCTTGATGCAACAACTCGCTGGGATCACATGAGCTTTAATGCAGAAGATACTCACAGAGCAGTTGACAATTCAAGGCACGAGCAGGAAAAAACTGAGGAAGTACTTGGTATGGAGTTATACCCTACAGGATCCAGCCTCCCAGACTGTTCCCATGCATGTGGACCATGTTTTCCGTGCAAAAGGGTGATGGTGAGCTTCAAATGCTCTGTTGCAGAGTCTTGTCCAACTGTCTACAAATGCATGTGTAAAGGGAAATATTATCACGTACCCTCCAATTGAGCTTCAATTCAATCTGGAGGAATATGCACCAAAGAACAAAGCAAATAATGATTTAATTAGCACTTAGCACTGAGGTGACTATTAATATATTGAAGACTGAGACTACATCCTCTGTTGAATTAGGGTTTATTTCCTTGTACTGGGATCATTCTGTATGAGAGTAACTGAGACAACTAATTTTCAAGCACATGAAGTTTAATTAGAAAGTTAGATGTTGGGGTTTTTTTCTACTACAGTCGTGTGCGATAACATTTTCATTGATATATTCTACTTGTAATGAGATCTGATTTATCCTGTTCCCCACCTTTCTAGGTTTTTAAAGTTGAGAATATACAGTTAAATGGACATCAGAAAAACAAACCAGAATAAGAGGATGGGCCAGTAAAGTTTGTGAAAGAGGGATACACTATGTTTTCAATTTCACCCCAAAAAGCATATGCATTCAGTCCAATAGGTAAAGTTTGGAAACTATCCAGCAGCCAGATAATAACCATAATAATAAATCCTTGGTTAATAAAGAAACGAACGGCAGAGTATCCTATCATAGAGCAAACGATATCAGAAATTAATGAAAACCTACTCTGAGGGAATTGTAGAAGAAGAGAAGAAAAGCATAATAAAAAGAAAACGACAATGGTAATTCAAACAGATGTTACACAACTGCACAGGCCTAAGCCATTCTGCACGTTATACATTTCAAAACTATCCAAGACACGTTACATACCAAATGGATTCTACTTCTATACCTCAAGCTCACTATTAGGCATGGAAAAATTGGCAATTGACAGGGGACACATTCAGCAAGAACCATATCTGTCAAAAGGATTGATCTTCGAAGGATATTACATCGAAATCCAATAAAAAATCCAAACTACATGAATCAAAATGATAACAGACAAAAGGATCGATCTTCTAAGTCGATTTATCTAGCCAGATAAGTTGCAGAAAAAGGCAATTCATGTCAACAAATCAATAATTACATATGCAAACAACTATCCAGACGATCGAAATCAAGAAAGGCAAACAGATATTACACAACTGCACAGGCTTAAGCCATTCTGCGTGATATACCTCAAGCTCATTATCGGGCATGGAAAAACTGGCAATTGGCAGGGGAGACATTTAGCAAGAACCATATCTGTCAAAAGGATCGATCTTCTAAGGATATTACATCGAAATCCAAACTACACGAATCAAAATGATAACAGACAAAATGATCGGTCTTCTAAGCCGATTTGTCTAACCAGATAAGTTGCAGAAAAAGGCAATTCATGTCAACAGATCAACAAACGATTATCCATACGATCGAAATCAAGAAAGGCAACACAAACTTTCAATTGGTAAAACGGTGGCCAATATACATCCACCTATAACAATTCGAATTGTAAGGAAAACCCCTTCGATCAGTTGTAACATATCGTTCGTCGAGCAGCAAATGTTGTCAATTACTTCGACACAAAAAACAAAGTATAATTAGATAATCTGACACTCAACCCGATTCTAAGAAAAAAGAAACACACACACGCGAATCCAGTAACCTTTCCAAACATCAGCTTTACATCTGAATCCGGACTATGAACTGACTCTACTGGAACCATCCCCGCCGTTTCCCCTAGAGCAACAAGGGTTTCCATTCCCATGATGGTGATTATCATCATCCTCCTGATCGCTGCCGTCCTCGTCAAAGGGTTTCTGCTTGTGGAATATACAGCACTTCTTCGAGCTCTTTTTCTGCATGAACTCGTTGTCGACGGTCCCTTCCTTCCATGAGACCTTCTTCTTCTTCCGATTGAGACGGAGAACTAGGGTTTCAGGGGGCTGAGAGGAAGAGGATCCGTTGGCCAAGATGACGGTGGTGGTGAGTGAAGGGGAGGAGGACGTTAATGCTCCGGCGGTGGTCATCGGTGCCCTAGCCATCTTTGATCAAGAGAATGAGAATTGGTAAAGACGGAGTCTGGGATGGCTTCTCTTTTTCATTTCCCAGTAGATGGAATAGTCGGTCTGCGCGTATCTCGATCCTTGCCGCCAAATGCCGATGTTTATATTCGAATATTCCATCCCTCGCTTTTTTTATTTT

Coding sequence (CDS)

ATGAAAAGTTTCCCACTCGTGGCTCACACATCTATACTTTTCGGGATTTTCTTCATCATACTAATGAATGGCAGAAGCCTTGATGCAACAACTCGCTGGGATCACATGAGCTTTAATGCAGAAGATACTCACAGAGCAGTTGACAATTCAAGGCACGAGCAGGAAAAAACTGAGGAAGTACTTGGTATGGAGTTATACCCTACAGGATCCAGCCTCCCAGACTGTTCCCATGCATGTGGACCATGTTTTCCGTGCAAAAGGGTGATGGTGAGCTTCAAATGCTCTGTTGCAGAGTCTTGTCCAACTGTCTACAAATGCATGTGTAAAGGGAAATATTATCACGTACCCTCCAATTGA

Protein sequence

MKSFPLVAHTSILFGIFFIILMNGRSLDATTRWDHMSFNAEDTHRAVDNSRHEQEKTEEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPSN

Homology

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BLAST of Bhi04G001278 vs. Swiss-Prot
Match: sp|Q8LC53|EPF2_ARATH (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.0e-22
Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 42  DTHRAVDNSRHEQEKTEEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCP 101
           D  +A  + + E  K   V  ME+YPTGSSLPDCS+ACG C PCKRVM+SF+CSVAESC 
Sbjct: 44  DIEQAQTHHKKEISKNGGV-EMEMYPTGSSLPDCSYACGACSPCKRVMISFECSVAESCS 103

Query: 102 TVYKCMCKGKYYHVPS 118
            +Y+C C+G+YYHVPS
Sbjct: 104 VIYRCTCRGRYYHVPS 118

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BLAST of Bhi04G001278 vs. Swiss-Prot
Match: sp|C4B8C5|EPFL7_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EPFL7 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.9e-18
Identity = 36/50 (72.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 68  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPS 118
           +GSS+PDCS+ACGPC PCK V++S  CS +E+CP VYKC+CKGKYYHVPS
Sbjct: 121 SGSSIPDCSNACGPCKPCKLVVISSTCSASEACPLVYKCLCKGKYYHVPS 170

[Close]

BLAST of Bhi04G001278 vs. Swiss-Prot
Match: sp|Q8S8I4|EPF1_ARATH (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-12
Identity = 33/51 (64.71%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 69  GSSLPDCSHACGPCFPCKRVMVSFKCS---VAESCPTVYKCMCKGKYYHVP 117
           GS LPDCSHACG C PC+ VMVSF C+    AE+CP  YKCMC  K Y VP
Sbjct: 54  GSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPVP 104

[Close]

BLAST of Bhi04G001278 vs. TAIR10
Match: AT1G34245.1 (Putative membrane lipoprotein)

HSP 1 Score: 104.4 bits (259), Expect = 5.0e-23
Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 42  DTHRAVDNSRHEQEKTEEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCP 101
           D  +A  + + E  K   V  ME+YPTGSSLPDCS+ACG C PCKRVM+SF+CSVAESC 
Sbjct: 44  DIEQAQTHHKKEISKNGGV-EMEMYPTGSSLPDCSYACGACSPCKRVMISFECSVAESCS 103

Query: 102 TVYKCMCKGKYYHVPS 118
            +Y+C C+G+YYHVPS
Sbjct: 104 VIYRCTCRGRYYHVPS 118

[Close]

BLAST of Bhi04G001278 vs. TAIR10
Match: AT1G71866.1 (LOCATED IN: endomembrane system)

HSP 1 Score: 91.3 bits (225), Expect = 4.4e-19
Identity = 36/50 (72.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 68  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPS 118
           +GSS+PDCS+ACGPC PCK V++S  CS +E+CP VYKC+CKGKYYHVPS
Sbjct: 121 SGSSIPDCSNACGPCKPCKLVVISSTCSASEACPLVYKCLCKGKYYHVPS 170

[Close]

BLAST of Bhi04G001278 vs. TAIR10
Match: AT2G20875.1 (epidermal patterning factor 1)

HSP 1 Score: 73.2 bits (178), Expect = 1.2e-13
Identity = 33/51 (64.71%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 69  GSSLPDCSHACGPCFPCKRVMVSFKCS---VAESCPTVYKCMCKGKYYHVP 117
           GS LPDCSHACG C PC+ VMVSF C+    AE+CP  YKCMC  K Y VP
Sbjct: 54  GSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPVP 104

[Close]

BLAST of Bhi04G001278 vs. TrEMBL
Match: tr|A0A1S3C3W6|A0A1S3C3W6_CUCME (protein EPIDERMAL PATTERNING FACTOR 1 OS=Cucumis melo OX=3656 GN=LOC103496551 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.4e-56
Identity = 106/118 (89.83%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKSFPLVAHTSILFGIFFIILMNGRSLDATTRWDHMSFNAEDTHRAVDNSRHEQEKTEEV 60
           MK FPLVAH S+LFGIFFIILM GRSLDA  RWDHMSFNAEDTHR V+NSR++QEKT+EV
Sbjct: 1   MKRFPLVAHISLLFGIFFIILMIGRSLDA-ARWDHMSFNAEDTHRTVNNSRNQQEKTKEV 60

Query: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPSN 119
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVY+CMCKGKYYHVPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPSN 117

[Close]

BLAST of Bhi04G001278 vs. TrEMBL
Match: tr|A0A0A0KB66|A0A0A0KB66_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052050 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.5e-53
Identity = 102/118 (86.44%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MKSFPLVAHTSILFGIFFIILMNGRSLDATTRWDHMSFNAEDTHRAVDNSRHEQEKTEEV 60
           MK  PLVAH S+LF IFFIILM G SLDA TRWDHMSFNAEDTHR +++SRH+QEKT+EV
Sbjct: 1   MKRLPLVAHISLLFVIFFIILMIGSSLDA-TRWDHMSFNAEDTHRTINHSRHQQEKTKEV 60

Query: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPSN 119
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVY+CMCKGKYY VPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYRVPSN 117

[Close]

BLAST of Bhi04G001278 vs. TrEMBL
Match: tr|A0A2I4DQQ5|A0A2I4DQQ5_9ROSI (protein EPIDERMAL PATTERNING FACTOR 2 OS=Juglans regia OX=51240 GN=LOC108982531 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-32
Identity = 76/119 (63.87%), Postives = 87/119 (73.11%), Query Frame = 0


Query: 1   MKSFPLVAHTSILFGIFFIILM-NGRSLDATTRWDHMSFNAEDTHRAVDNSRHEQEKTEE 60
           MK+  L AHTS LF  FF+IL+ +  SL  T R+  +SFN E T+         +E  +E
Sbjct: 1   MKNLSLGAHTSFLFLSFFLILITSSTSLRVTNRYFSVSFNEEATNFGDQGHISPKEDAKE 60

Query: 61  VLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPSN 119
             GMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS  ESCP VY+CMCKGK+YHVPSN
Sbjct: 61  EHGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS-TESCPIVYRCMCKGKFYHVPSN 118

[Close]

BLAST of Bhi04G001278 vs. TrEMBL
Match: tr|A0A061FK47|A0A061FK47_THECC (Membrane lipoprotein OS=Theobroma cacao OX=3641 GN=TCM_036636 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-30
Identity = 69/118 (58.47%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 1   MKSFPLVAHTSILFGIFFIILMNGRSLDATTRWDHMSFNAEDTHRAVDNSRHEQEKTEEV 60
           M S  L     +L   F ++ +   SL       H S + + T        H QE  +E 
Sbjct: 1   MNSLSLRVAGQMLVLTFLMVSLATDSLRVPPHDHHASIHGKATKFGDKGQMHRQEGEKEE 60

Query: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPSN 119
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS+AESCP VY+CMCKGKYYHVPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSIAESCPIVYRCMCKGKYYHVPSN 118

[Close]

BLAST of Bhi04G001278 vs. TrEMBL
Match: tr|A0A1Q3CMV2|A0A1Q3CMV2_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_24886 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-30
Identity = 66/119 (55.46%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 1   MKSFPLVAHTSILFGIFFIILMNGRSLDATT-RWDHMSFNAEDTHRAVDNSRHEQEKTEE 60
           MK + +  H S       +++M G+SL  +   +  +SFN E T        H +E+ +E
Sbjct: 1   MKKYAIGVHVSFFIATLCMVVMVGKSLRLSPHHYMSVSFNGEGTKSGDQEHVHLEEEAKE 60

Query: 61  VLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPSN 119
             G+E+Y TGSSLPDCSHACGPCFPCKRVMVSFKCS+AESCP VY+C CKGKYYHVPSN
Sbjct: 61  EQGVEVYTTGSSLPDCSHACGPCFPCKRVMVSFKCSIAESCPIVYRCTCKGKYYHVPSN 119

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BLAST of Bhi04G001278 vs. NCBI nr
Match: XP_008456675.1 (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo])

HSP 1 Score: 225.7 bits (574), Expect = 8.2e-56
Identity = 106/118 (89.83%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKSFPLVAHTSILFGIFFIILMNGRSLDATTRWDHMSFNAEDTHRAVDNSRHEQEKTEEV 60
           MK FPLVAH S+LFGIFFIILM GRSLDA  RWDHMSFNAEDTHR V+NSR++QEKT+EV
Sbjct: 1   MKRFPLVAHISLLFGIFFIILMIGRSLDA-ARWDHMSFNAEDTHRTVNNSRNQQEKTKEV 60

Query: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPSN 119
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVY+CMCKGKYYHVPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPSN 117

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BLAST of Bhi04G001278 vs. NCBI nr
Match: XP_004140931.1 (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 2 [Cucumis sativus] >KGN46079.1 hypothetical protein Csa_6G052050 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 3.8e-53
Identity = 102/118 (86.44%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MKSFPLVAHTSILFGIFFIILMNGRSLDATTRWDHMSFNAEDTHRAVDNSRHEQEKTEEV 60
           MK  PLVAH S+LF IFFIILM G SLDA TRWDHMSFNAEDTHR +++SRH+QEKT+EV
Sbjct: 1   MKRLPLVAHISLLFVIFFIILMIGSSLDA-TRWDHMSFNAEDTHRTINHSRHQQEKTKEV 60

Query: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPSN 119
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVY+CMCKGKYY VPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYRVPSN 117

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BLAST of Bhi04G001278 vs. NCBI nr
Match: XP_022957958.1 (protein EPIDERMAL PATTERNING FACTOR 1-like [Cucurbita moschata] >XP_023518828.1 protein EPIDERMAL PATTERNING FACTOR 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.1 bits (549), Expect = 6.5e-53
Identity = 99/118 (83.90%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MKSFPLVAHTSILFGIFFIILMNGRSLDATTRWDHMSFNAEDTHRAVDNSRHEQEKTEEV 60
           MK F +VAH S+LFGIFFIILM GRSLD TTRWDHMS+NAED HR   + R E+EK +EV
Sbjct: 1   MKKFSIVAHMSLLFGIFFIILMIGRSLDVTTRWDHMSYNAEDAHRTDGSLRQEEEKAKEV 60

Query: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPSN 119
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVY+CMCKGKYYHVPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPSN 118

[Close]

BLAST of Bhi04G001278 vs. NCBI nr
Match: XP_023550443.1 (protein EPIDERMAL PATTERNING FACTOR 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.1 bits (549), Expect = 6.5e-53
Identity = 99/118 (83.90%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MKSFPLVAHTSILFGIFFIILMNGRSLDATTRWDHMSFNAEDTHRAVDNSRHEQEKTEEV 60
           M  FPLVA TS+LF IFFIILM GR LDA+TRWDHMSFN EDTHR V +S H++EKTEE 
Sbjct: 1   MWKFPLVAQTSLLFWIFFIILMIGRRLDASTRWDHMSFNVEDTHRPVGSSTHQEEKTEEA 60

Query: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPSN 119
           LGMELYPTGS+LPDCSHACGPCFPCKRVMVSFKCS AESCPTVY+CMCKGKYYHVPSN
Sbjct: 61  LGMELYPTGSNLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMCKGKYYHVPSN 118

[Close]

BLAST of Bhi04G001278 vs. NCBI nr
Match: XP_022992672.1 (protein EPIDERMAL PATTERNING FACTOR 2-like [Cucurbita maxima])

HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52
Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MKSFPLVAHTSILFGIFFIILMNGRSLDATTRWDHMSFNAEDTHRAVDNSRHEQEKTEEV 60
           MK FPLVA T +LF IFFIILM GR LDA+TRWDHM FNAEDTHR V +S H++EKTEE 
Sbjct: 1   MKKFPLVAQT-LLFWIFFIILMIGRRLDASTRWDHMRFNAEDTHRPVGSSTHQEEKTEEA 60

Query: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYKCMCKGKYYHVPSN 119
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVY+CMCKGKYYHVPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPSN 117

The following BLAST results are available for this feature:

BLAST of Bhi04G001278 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LC53\|EPF2_ARATH	9.0e-22	61.84	Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE...	[more]
sp\|C4B8C5\|EPFL7_ARATH	7.9e-18	72.00	EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
sp\|Q8S8I4\|EPF1_ARATH	2.2e-12	64.71	Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE...	[more]

BLAST of Bhi04G001278 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G34245.1	5.0e-23	61.84	Putative membrane lipoprotein	[more]
AT1G71866.1	4.4e-19	72.00	LOCATED IN: endomembrane system	[more]
AT2G20875.1	1.2e-13	64.71	epidermal patterning factor 1	[more]

BLAST of Bhi04G001278 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C3W6\|A0A1S3C3W6_CUCME	5.4e-56	89.83	protein EPIDERMAL PATTERNING FACTOR 1 OS=Cucumis melo OX=3656 GN=LOC103496551 PE...	[more]
tr\|A0A0A0KB66\|A0A0A0KB66_CUCSA	2.5e-53	86.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052050 PE=4 SV=1	[more]
tr\|A0A2I4DQQ5\|A0A2I4DQQ5_9ROSI	1.1e-32	63.87	protein EPIDERMAL PATTERNING FACTOR 2 OS=Juglans regia OX=51240 GN=LOC108982531 ...	[more]
tr\|A0A061FK47\|A0A061FK47_THECC	2.3e-30	58.47	Membrane lipoprotein OS=Theobroma cacao OX=3641 GN=TCM_036636 PE=4 SV=1	[more]
tr\|A0A1Q3CMV2\|A0A1Q3CMV2_CEPFO	2.3e-30	55.46	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_24886 PE=4...	[more]

BLAST of Bhi04G001278 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456675.1	8.2e-56	89.83	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]	[more]
XP_004140931.1	3.8e-53	86.44	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 2 [Cucumis sativus] >KGN46079.1 h...	[more]
XP_022957958.1	6.5e-53	83.90	protein EPIDERMAL PATTERNING FACTOR 1-like [Cucurbita moschata] >XP_023518828.1 ...	[more]
XP_023550443.1	6.5e-53	83.90	protein EPIDERMAL PATTERNING FACTOR 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022992672.1	1.1e-52	85.59	protein EPIDERMAL PATTERNING FACTOR 2-like [Cucurbita maxima]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:2000122	negative regulation of stomatal complex development
biological_process	GO:0048730	epidermis morphogenesis
biological_process	GO:0008150	biological_process
biological_process	GO:0090626	plant epidermis morphogenesis
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0019901	protein kinase binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001278	Bhi04M001278	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 68..115 e-value: 9.8E-15 score: 54.2
None	No IPR available	PANTHER	PTHR33109:SF6	PROTEIN EPIDERMAL PATTERNING FACTOR 2	coord: 6..117
None	No IPR available	PANTHER	PTHR33109	FAMILY NOT NAMED	coord: 6..117

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi04G001278	Csa6G052050	Cucumber (Chinese Long) v2	cuwgoB588
Bhi04G001278	MELO3C019934	Melon (DHL92) v3.5.1	mewgoB326
Bhi04G001278	ClCG08G008650	Watermelon (Charleston Gray)	wcgwgoB628
Bhi04G001278	CSPI06G04310	Wild cucumber (PI 183967)	cpiwgoB593
Bhi04G001278	CmaCh04G024860	Cucurbita maxima (Rimu)	cmawgoB0861
Bhi04G001278	CmoCh04G026010	Cucurbita moschata (Rifu)	cmowgoB0858
Bhi04G001278	Lsi08G006110	Bottle gourd (USVL1VR-Ls)	lsiwgoB593
Bhi04G001278	MELO3C019934.2	Melon (DHL92) v3.6.1	medwgoB325

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G001278	Cucumber (Gy14) v1	cgywgoB731
Bhi04G001278	Cucumber (Gy14) v2	cgybwgoB560
Bhi04G001278	Cucurbita maxima (Rimu)	cmawgoB0398
Bhi04G001278	Cucurbita moschata (Rifu)	cmowgoB0393
Bhi04G001278	Cucurbita pepo (Zucchini)	cpewgoB0248
Bhi04G001278	Cucurbita pepo (Zucchini)	cpewgoB0526
Bhi04G001278	Cucumber (Chinese Long) v3	cucwgoB607
Bhi04G001278	Watermelon (97103) v2	wgowmbB329
Bhi04G001278	Watermelon (97103) v1	wgowmB313
Bhi04G001278	Silver-seed gourd	carwgoB0076
Bhi04G001278	Silver-seed gourd	carwgoB0965