Bhi01G001651 (gene) Wax gourd

NameBhi01G001651
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionTranscription factor like
Locationchr1 : 50140087 .. 50141844 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACGCTCAATTCTTCTTCTTCGTCGATTCCTCTCTCTCTCAGTCTCTCTCTCTCTCTCAAACTGGCGCATAGAATGAGTTCGATTACAAAGAAACACAGAATACCATGGAAGCAATCAATCAGAAGAACGGTTTTGCGATCGAGATACGGTTCTCGAATCGTCAGAGCTCGAAGAAATCACAAAAATGGCGGAAAATCGTGCACATCAGACGTATCGGCGAAGCTTGAGTCGCTCCGGAGCCTCATTCCGACTTGCAGTGACGACGGAGGACATCGGAGAGCGGAGGATTTGTTTCAACAGACAGCGGATTACATCGTGCTGTTGAAGAATCAGGTGTTCGTTCTACAGAGGCTGATCGAGTTTTACGGATCGGATGATAGAGAAAATGCCGTATCCTCGTAGGTTTTATTCTTCTTAAATTAAGGAAATAGGAAACTGAGAAGAGGAGAAGGTGGAAAGGATCAATAACTTTCTGGAATTTTGGTTTTCATGTGCCGTGTTTGGTTGGAGGGAATTTGATGATCGAATAGCGAAGTCTCTAGAATTTCTTCTTTCTCTATTTACTTTCTTTCTTTCAAATATCAAATACATGAATACAAGTTACCTTGTGCTCCAAATCTCAATGATTTAGGGAAATTTTGTAGGTGTTTTTGAGGAAGAAATATAGAGAAGATGAGAGAAGTTGAAATCTGAGGTACAACAGTATACGATTTCAATTTCTCCAATCAACAATTCTCGGGAAGGTAAGGTAAGAATTAAGATAACCATTCTTTTAGATTATACTGAAAAATGATAGGAATTAATTACAATATTGCTTATTTGATTTCCAATGGGGTTTGTGGATGAGAAAACTGTGGTGAAACTGAAAGCAGGAGAAATTGAAGGTGTGCAATAATTGTGGATAGTGGGAATTGGTGGATTGTTAAGGAAGGAAAGAGGCAGGAATTCTTCTGCTAGTACGGACGTATCATACACTGACAATGTCAGTGAGTCTCATCTGTAAATTTATCTTTATAAATATTTGTGAATCCGACATTAACGCGAATGATTTCCATCTTATTTCTAAAAGTATATAGATAGGGCATATAATGAGAGATAATATGGAAAATTGTTTATACTGTTATAGTATAGAAAAGTTTCTCAAAAGAGGTAGAATATACGAGGAAATTTTTAGTATGACCGTAGAATAATTTTTTTTTCATAAGATCTCTCTTTATTATTTATCATAAAAGTAGTATTGAAGAATTATGTATAGATCTACATAATAAACAAATAAATGTTTAATTATAGATCAAATAACGAATAGGAGTAATAGATACTATGACAGTATTTTTTTAGAGATGGTTTATAATTCTTCTCATCGTATCCTATTCTTATAATCCCTATTCCTATTCCTAGTGAGATGGACATCTGAAGCCAGTGACTTCTATATCTCAAAATCAATGGATGGGCTGATGATGTTCACAACTTTTCTAGAGAGAGGAAAGGCCATGCCATGTGCTAAC

mRNA sequence

AAACGCTCAATTCTTCTTCTTCGTCGATTCCTCTCTCTCTCAGTCTCTCTCTCTCTCTCAAACTGGCGCATAGAATGAGTTCGATTACAAAGAAACACAGAATACCATGGAAGCAATCAATCAGAAGAACGGTTTTGCGATCGAGATACGGTTCTCGAATCGTCAGAGCTCGAAGAAATCACAAAAATGGCGGAAAATCGTGCACATCAGACGTATCGGCGAAGCTTGAGTCGCTCCGGAGCCTCATTCCGACTTGCAGTGACGACGGAGGACATCGGAGAGCGGAGGATTTGTTTCAACAGACAGCGGATTACATCGTGCTGTTGAAGAATCAGGTGTTCGTTCTACAGAGGCTGATCGAGTTTTACGGATCGGATGATAGAGAAAATGCCGTATCCTCGTAGGTTTTATTCTTCTTAAATTAAGGAAATAGGAAACTGAGAAGAGGAGAAGGTGGAAAGGATCAATAACTTTCTGGAATTTTGGTTTTCATGTGCCGTGTTTGGTTGGAGGGAATTTGATGATCGAATAGCGAAGTCTCTAGAATTTCTTCTTTCTCTATTTACTTTCTTTCTTTCAAATATCAAATACATGAATACAAGTTACCTTGTGCTCCAAATCTCAATGATTTAGGGAAATTTTGTAGGTGTTTTTGAGGAAGAAATATAGAGAAGATGAGAGAAGTTGAAATCTGAGGTACAACAGTATACGATTTCAATTTCTCCAATCAACAATTCTCGGGAAGGTAAGGTAAGAATTAAGATAACCATTCTTTTAGATTATACTGAAAAATGATAGGAATTAATTACAATATTGCTTATTTGATTTCCAATGGGGTTTGTGGATGAGAAAACTGTGGTGAAACTGAAAGCAGGAGAAATTGAAGGTGTGCAATAATTGTGGATAGTGGGAATTGGTGGATTGTTAAGGAAGGAAAGAGGCAGGAATTCTTCTGCTAGTACGGACGTATCATACACTGACAATTGAGATGGACATCTGAAGCCAGTGACTTCTATATCTCAAAATCAATGGATGGGCTGATGATGTTCACAACTTTTCTAGAGAGAGGAAAGGCCATGCCATGTGCTAAC

Coding sequence (CDS)

ACGCTCAATTCTTCTTCTTCGTCGATTCCTCTCTCTCTCAGTCTCTCTCTCTCTCTCAAACTGGCGCATAGAATGAGTTCGATTACAAAGAAACACAGAATACCATGGAAGCAATCAATCAGAAGAACGGTTTTGCGATCGAGATACGGTTCTCGAATCGTCAGAGCTCGAAGAAATCACAAAAATGGCGGAAAATCGTGCACATCAGACGTATCGGCGAAGCTTGAGTCGCTCCGGAGCCTCATTCCGACTTGCAGTGACGACGGAGGACATCGGAGAGCGGAGGATTTGTTTCAACAGACAGCGGATTACATCGTGCTGTTGAAGAATCAGGTGTTCGTTCTACAGAGGCTGATCGAGTTTTACGGATCGGATGATAGAGAAAATGCCGTATCCTCGTAG

Protein sequence

TLNSSSSSIPLSLSLSLSLKLAHRMSSITKKHRIPWKQSIRRTVLRSRYGSRIVRARRNHKNGGKSCTSDVSAKLESLRSLIPTCSDDGGHRRAEDLFQQTADYIVLLKNQVFVLQRLIEFYGSDDRENAVSS
BLAST of Bhi01G001651 vs. TAIR10
Match: AT5G39240.1 (unknown protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-09
Identity = 39/96 (40.62%), Postives = 51/96 (53.12%), Query Frame = 0

Query: 46  RSRYGSRIVRARRNHKNGGKSCTSDVSAKLESLRSLIPTCS-------------DDGGHR 105
           RSR G R  +   N +  G       S KL++L+SL+P  S             +D    
Sbjct: 8   RSRGGRRTSKKFGNRRTSG---GEKFSEKLQALKSLLPPPSKMTEQSRQDAYVEEDSSVG 67

Query: 106 RAEDLFQQTADYIVLLKNQVFVLQRLIEFYGSDDRE 129
             E LFQ+TADYIV L+ QV VLQ+LIE YGS D++
Sbjct: 68  ETEQLFQETADYIVRLRGQVVVLQKLIEIYGSSDQK 100

BLAST of Bhi01G001651 vs. TAIR10
Match: AT3G29370.1 (unknown protein)

HSP 1 Score: 53.9 bits (128), Expect = 8.7e-08
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0

Query: 62  NGGKSCTSDVSAKLESLRSLIPTCSDDGGHRRAEDLFQQTADYIVLLKNQVFVLQRLIEF 121
           NG       V  KL +L+SL+P   + GG    E+LFQ+TA+YIV L+ QV VL++LIE 
Sbjct: 30  NGSSDGGKTVMEKLLALKSLLPPPVNVGG-GETEELFQETAEYIVKLRTQVVVLKKLIEI 89

Query: 122 Y--GSDDRENAV 132
           Y   SD +++ V
Sbjct: 90  YDNSSDQKKDVV 100

BLAST of Bhi01G001651 vs. TrEMBL
Match: tr|A0A2P5AW87|A0A2P5AW87_PARAD (Transcription factor UPBEAT-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_294590 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.7e-16
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 0

Query: 25  MSSITKKHRIPWKQSIRRTVLRSR-YGSRIVRARRNHKNGGKSCTSDVSAKLESLRSLIP 84
           MSS TK      K ++RRT  R R   SR   ARR+  NGG +C+S VS KLE+L+ LIP
Sbjct: 1   MSSTTKDQ----KTNVRRTRRRGRKTRSRDCVARRSCNNGGGTCSSKVSGKLEALKKLIP 60

Query: 85  TCSDDGGHRRAEDLFQQTADYIVLLKNQVFVLQRLIEFYGSDDRENAVS 133
               +G   + + LFQQTADYIVLL+ QV +LQ+LIEFYGS D E+AVS
Sbjct: 61  --GHEGEIVKTDQLFQQTADYIVLLRTQVVLLQKLIEFYGSADSEHAVS 103

BLAST of Bhi01G001651 vs. TrEMBL
Match: tr|A0A2P5ED64|A0A2P5ED64_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_207440 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.1e-15
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 0

Query: 25  MSSITKKHRIPWKQSIRRTVLRSR-YGSRIVRARRNHKNGGKSCTSDVSAKLESLRSLIP 84
           MSS TK  +I    ++RRT  R R   SR   A R+  NGG +C+S VS KLE+L+ LIP
Sbjct: 1   MSSTTKDQKI----NVRRTRRRGRKTRSRDCVALRSCNNGGGTCSSKVSDKLEALKKLIP 60

Query: 85  TCSDDGGHRRAEDLFQQTADYIVLLKNQVFVLQRLIEFYGSDDRENAVS 133
               +G   + + LFQQTADYIVLL+ QV +LQ+LIEFYGS D E+AVS
Sbjct: 61  --GHEGEIVKTDQLFQQTADYIVLLRTQVVLLQKLIEFYGSADSEHAVS 103

BLAST of Bhi01G001651 vs. TrEMBL
Match: tr|W9QIE0|W9QIE0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021014 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-13
Identity = 56/114 (49.12%), Postives = 75/114 (65.79%), Query Frame = 0

Query: 25  MSSITKKHRIPWKQSIRRT---VLRSRYGSR---IVRARRNHKNGGKSCTSDVSAKLESL 84
           M S TK  +I  +++ RR     LR R  SR      +RR   NGG++C S VS KLE+L
Sbjct: 1   MKSSTKNQKISARKTRRRRRIGSLRRRPRSRDCCAAVSRRRCDNGGRTC-SKVSDKLEAL 60

Query: 85  RSLIPTCSDDGGHRRAEDLFQQTADYIVLLKNQVFVLQRLIEFYGSDDRENAVS 133
           ++LIP  + +G   +A+ LFQQTADYIVLL+ +V +LQ+LIEFYGS + EN VS
Sbjct: 61  KNLIP--AQEGEIVKADQLFQQTADYIVLLRAKVVILQKLIEFYGSSESENVVS 111

BLAST of Bhi01G001651 vs. TrEMBL
Match: tr|A0A067JTG6|A0A067JTG6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19930 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-13
Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 0

Query: 25  MSSITKKHRIPWKQSIRRTVLRSRYGSRIVRARRNHKNGGKSC--TSDVSAKLESLRSLI 84
           MSS++K  +I   ++ RR    S    R  +A+R+  NGG++C   S VS KLE+L++LI
Sbjct: 1   MSSVSKNSKISLGKTPRRR-RTSTCQRRFRKAKRSTINGGRTCFSKSKVSEKLEALKNLI 60

Query: 85  PTCSDDGGHRRAEDLFQQTADYIVLLKNQVFVLQRLIEFYGS 125
           P  +++G   +AE LFQ+TADYIVLL+ QVFVLQRLIEFYGS
Sbjct: 61  P--ANNGETVKAEQLFQETADYIVLLRTQVFVLQRLIEFYGS 99

BLAST of Bhi01G001651 vs. TrEMBL
Match: tr|F6H405|F6H405_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g00510 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12
Identity = 47/85 (55.29%), Postives = 59/85 (69.41%), Query Frame = 0

Query: 47  SRYGSRIVRARRNHKNGGKSCTSDVSAKLESLRSLIPTCSDDGGHRRAEDLFQQTADYIV 106
           +R   R+ R  R+  NGG S +S VS KLE+LRSL+P      G  +A+ LFQ+TADYIV
Sbjct: 19  ARLCCRVRRGSRSFGNGGDS-SSKVSDKLEALRSLVPV---HNGDIQADQLFQETADYIV 78

Query: 107 LLKNQVFVLQRLIEFYGSDDRENAV 132
           LL+ QV +LQRLI+FYGS   ENAV
Sbjct: 79  LLRKQVVILQRLIQFYGSGHEENAV 99

BLAST of Bhi01G001651 vs. NCBI nr
Match: PON40768.1 (transcription factor UPBEAT-like protein [Parasponia andersonii])

HSP 1 Score: 93.2 bits (230), Expect = 7.1e-16
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 0

Query: 25  MSSITKKHRIPWKQSIRRTVLRSR-YGSRIVRARRNHKNGGKSCTSDVSAKLESLRSLIP 84
           MSS TK      K ++RRT  R R   SR   ARR+  NGG +C+S VS KLE+L+ LIP
Sbjct: 1   MSSTTKDQ----KTNVRRTRRRGRKTRSRDCVARRSCNNGGGTCSSKVSGKLEALKKLIP 60

Query: 85  TCSDDGGHRRAEDLFQQTADYIVLLKNQVFVLQRLIEFYGSDDRENAVS 133
               +G   + + LFQQTADYIVLL+ QV +LQ+LIEFYGS D E+AVS
Sbjct: 61  --GHEGEIVKTDQLFQQTADYIVLLRTQVVLLQKLIEFYGSADSEHAVS 103

BLAST of Bhi01G001651 vs. NCBI nr
Match: PON83472.1 (hypothetical protein TorRG33x02_207440 [Trema orientalis])

HSP 1 Score: 90.5 bits (223), Expect = 4.6e-15
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 0

Query: 25  MSSITKKHRIPWKQSIRRTVLRSR-YGSRIVRARRNHKNGGKSCTSDVSAKLESLRSLIP 84
           MSS TK  +I    ++RRT  R R   SR   A R+  NGG +C+S VS KLE+L+ LIP
Sbjct: 1   MSSTTKDQKI----NVRRTRRRGRKTRSRDCVALRSCNNGGGTCSSKVSDKLEALKKLIP 60

Query: 85  TCSDDGGHRRAEDLFQQTADYIVLLKNQVFVLQRLIEFYGSDDRENAVS 133
               +G   + + LFQQTADYIVLL+ QV +LQ+LIEFYGS D E+AVS
Sbjct: 61  --GHEGEIVKTDQLFQQTADYIVLLRTQVVLLQKLIEFYGSADSEHAVS 103

BLAST of Bhi01G001651 vs. NCBI nr
Match: KDP27231.1 (hypothetical protein JCGZ_19930 [Jatropha curcas])

HSP 1 Score: 84.7 bits (208), Expect = 2.5e-13
Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 0

Query: 25  MSSITKKHRIPWKQSIRRTVLRSRYGSRIVRARRNHKNGGKSC--TSDVSAKLESLRSLI 84
           MSS++K  +I   ++ RR    S    R  +A+R+  NGG++C   S VS KLE+L++LI
Sbjct: 1   MSSVSKNSKISLGKTPRRR-RTSTCQRRFRKAKRSTINGGRTCFSKSKVSEKLEALKNLI 60

Query: 85  PTCSDDGGHRRAEDLFQQTADYIVLLKNQVFVLQRLIEFYGS 125
           P  +++G   +AE LFQ+TADYIVLL+ QVFVLQRLIEFYGS
Sbjct: 61  P--ANNGETVKAEQLFQETADYIVLLRTQVFVLQRLIEFYGS 99

BLAST of Bhi01G001651 vs. NCBI nr
Match: XP_010089621.2 (uncharacterized protein LOC21403881 [Morus notabilis])

HSP 1 Score: 84.7 bits (208), Expect = 2.5e-13
Identity = 56/114 (49.12%), Postives = 75/114 (65.79%), Query Frame = 0

Query: 25  MSSITKKHRIPWKQSIRRT---VLRSRYGSR---IVRARRNHKNGGKSCTSDVSAKLESL 84
           M S TK  +I  +++ RR     LR R  SR      +RR   NGG++C S VS KLE+L
Sbjct: 1   MKSSTKNQKISARKTRRRRRIGSLRRRPRSRDCCAAVSRRRCDNGGRTC-SKVSDKLEAL 60

Query: 85  RSLIPTCSDDGGHRRAEDLFQQTADYIVLLKNQVFVLQRLIEFYGSDDRENAVS 133
           ++LIP  + +G   +A+ LFQQTADYIVLL+ +V +LQ+LIEFYGS + EN VS
Sbjct: 61  KNLIP--AQEGEIVKADQLFQQTADYIVLLRAKVVILQKLIEFYGSSESENVVS 111

BLAST of Bhi01G001651 vs. NCBI nr
Match: EXB38092.1 (hypothetical protein L484_021014 [Morus notabilis])

HSP 1 Score: 84.7 bits (208), Expect = 2.5e-13
Identity = 56/114 (49.12%), Postives = 75/114 (65.79%), Query Frame = 0

Query: 25  MSSITKKHRIPWKQSIRRT---VLRSRYGSR---IVRARRNHKNGGKSCTSDVSAKLESL 84
           M S TK  +I  +++ RR     LR R  SR      +RR   NGG++C S VS KLE+L
Sbjct: 1   MKSSTKNQKISARKTRRRRRIGSLRRRPRSRDCCAAVSRRRCDNGGRTC-SKVSDKLEAL 60

Query: 85  RSLIPTCSDDGGHRRAEDLFQQTADYIVLLKNQVFVLQRLIEFYGSDDRENAVS 133
           ++LIP  + +G   +A+ LFQQTADYIVLL+ +V +LQ+LIEFYGS + EN VS
Sbjct: 61  KNLIP--AQEGEIVKADQLFQQTADYIVLLRAKVVILQKLIEFYGSSESENVVS 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G39240.11.6e-0940.63unknown protein[more]
AT3G29370.18.7e-0844.44unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A2P5AW87|A0A2P5AW87_PARAD4.7e-1654.13Transcription factor UPBEAT-like protein OS=Parasponia andersonii OX=3476 GN=Pan... [more]
tr|A0A2P5ED64|A0A2P5ED64_9ROSA3.1e-1553.21Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_207440 PE=4 S... [more]
tr|W9QIE0|W9QIE0_9ROSA1.7e-1349.12Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021014 PE=4 SV=1[more]
tr|A0A067JTG6|A0A067JTG6_JATCU1.7e-1351.96Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19930 PE=4 SV=1[more]
tr|F6H405|F6H405_VITVI1.4e-1255.29Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g00510 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
PON40768.17.1e-1654.13transcription factor UPBEAT-like protein [Parasponia andersonii][more]
PON83472.14.6e-1553.21hypothetical protein TorRG33x02_207440 [Trema orientalis][more]
KDP27231.12.5e-1351.96hypothetical protein JCGZ_19930 [Jatropha curcas][more]
XP_010089621.22.5e-1349.12uncharacterized protein LOC21403881 [Morus notabilis][more]
EXB38092.12.5e-1349.12hypothetical protein L484_021014 [Morus notabilis][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR036638HLH_DNA-bd_sf
IPR011598bHLH_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001651Bhi01M001651mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33124FAMILY NOT NAMEDcoord: 25..130
NoneNo IPR availablePANTHERPTHR33124:SF9SUBFAMILY NOT NAMEDcoord: 25..130
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 55..108
score: 8.829
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILYSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 58..122

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi01G001651Cucurbita moschata (Rifu)cmowgoB0312
Bhi01G001651Cucurbita pepo (Zucchini)cpewgoB0674
Bhi01G001651Cucurbita pepo (Zucchini)cpewgoB0679
Bhi01G001651Cucurbita pepo (Zucchini)cpewgoB0780