CU088955 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU088955
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 7097135 .. 7104475 (+)
Sequence length394
The following sequences are available for this feature:

transcribed_cluster sequence

GTTAATGCATGGAGGATTGGGTTAAACCTAGTGCAGTACCGAGAAGTAATTTTAATGATACATTGCGTGATCAAAATCAGTATGAGAAGAAGAACTACTCTGCTGGTGGAAGCATGCTAGGACTCGGAGATGACTTTGATGATGATTTGGGCCATTTTGATGAGCTCTTGGAAGAGCCTGAGGGAGTAGATGAAGGAGTTAAATATTTATGACAAGAAATGTTATGATGGAAACAATGTGGGGGGAAATCAAAGTAAGCAAGATGCTGAGAAATTGGCAATTGAATTACTTGCAATAAGGTAATATTATGTAAATTGTGATTCCTGTCTTTTATTTTCGAATCTGCACTACTCTGATTTGCTGAGACTGTAAAAGTAAAAAATGAGTTTCCGAC
Library categoryESTs
gynoecious flower library2
BLAST of CU088955 vs. TrEMBL
Match: A0A0A0K741_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G197300 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.9e-09
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 3

Query: 21  VKPSAVPRSNFNDTLRDQNQYEKKNYSAGGSM 80
           VKPSAVPRSNFNDTLRDQNQYEKKNYSAGGSM
Sbjct: 85  VKPSAVPRSNFNDTLRDQNQYEKKNYSAGGSM 116

Query: 81  117
           
Sbjct: 145 116

BLAST of CU088955 vs. NCBI nr
Match: gi|449444022|ref|XP_004139774.1| (PREDICTED: uncharacterized protein LOC101220193 [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-10
Identity = 38/58 (65.52%), Postives = 38/58 (65.52%), Query Frame = 3

Query: 21  VKPSAVPRSNFNDTLRDQNQYEKKNYSAGGSMXXXXXXXXXXXXXXXXXXXXPEGVDE 80
           VKPSAVPRSNFNDTLRDQNQYEKKNYSAGGSM                    PEGVDE
Sbjct: 85  VKPSAVPRSNFNDTLRDQNQYEKKNYSAGGSMLGLGDDFDDDLGHFDELLEEPEGVDE 142

Query: 81  140
           
Sbjct: 145 142

Query: 141 195
           
Sbjct: 205 142

BLAST of CU088955 vs. NCBI nr
Match: gi|700188889|gb|KGN44122.1| (hypothetical protein Csa_7G197300 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 4.2e-09
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 3

Query: 21  VKPSAVPRSNFNDTLRDQNQYEKKNYSAGGSM 80
           VKPSAVPRSNFNDTLRDQNQYEKKNYSAGGSM
Sbjct: 85  VKPSAVPRSNFNDTLRDQNQYEKKNYSAGGSM 116

Query: 81  117
           
Sbjct: 145 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K741_CUCSA3.9e-09100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G197300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449444022|ref|XP_004139774.1|1.0e-1065.52PREDICTED: uncharacterized protein LOC101220193 [Cucumis sativus][more]
gi|700188889|gb|KGN44122.1|4.2e-09100.00hypothetical protein Csa_7G197300 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G197300Csa7G197300gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0039063G0039063EST
G0177338G0177338EST