MELO3C025831 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025831
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Serine/threonine-protein kinase UL13 homolog
Location	chr4 : 17859883 .. 17860584 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCGCCTCTTGGCTGGCAACGGCCACCAAATCAGCGGCAATCGCCGCAAAGCAATCAAAATAATAGTCCACAGAGACCTCCTCAAACAATAGCTTCCTCCTCAGAAACAATACCTTCCAAGGGAAAACCCTCAACTCAATCATCTGCACCGTCACCTATGAGTGCAGAAAATTACACCATGGATTTACAATTTGAACAAGTATCCAGGCGACGTCAAGGTTTTGCTCAAAGAACATTGACTATTCAATCAGACTCTTCGAGTCTTCCCCCAATACCTTCAACCGCATTGCTGCGTCCCTCTGGGCCAACAACTCCAAATAAGCGTGCTGCTTCCCCGACCGCTTCTTCCTCAAGCTCTGCAATTCCGAGGAATCCTTCCTCGTATTCTCAAATCGTTAGGCCAAAAGTATTCCAGCCTAGACCTCCAATTAATGGTTATTTCACCAAAACCACGATGGTTGATTTAACCATAGAACCAGAATTCGATGGACCCTCCGTCTACGAAGTCTATAATCAAATATTTCCTCACGAGTTTAACTTCTTACCGGAGGATCTTGCAAAGACTAGGACCTTCTACAAGTACATTTTAGTTGACTCAAAATCAGCTGAAATTACTCACGTCCCAGACAAAAATGATCCCTCTAAGATCATTTATTCAAAGTTGAGGATTTTTCGTGTTCTCACTCAATCTTACTAG

mRNA sequence

ATGGAACCGCCTCTTGGCTGGCAACGGCCACCAAATCAGCGGCAATCGCCGCAAAGCAATCAAAATAATAGTCCACAGAGACCTCCTCAAACAATAGCTTCCTCCTCAGAAACAATACCTTCCAAGGGAAAACCCTCAACTCAATCATCTGCACCGTCACCTATGAGTGCAGAAAATTACACCATGGATTTACAATTTGAACAAGTATCCAGGCGACGTCAAGGTTTTGCTCAAAGAACATTGACTATTCAATCAGACTCTTCGAGTCTTCCCCCAATACCTTCAACCGCATTGCTGCGTCCCTCTGGGCCAACAACTCCAAATAAGCGTGCTGCTTCCCCGACCGCTTCTTCCTCAAGCTCTGCAATTCCGAGGAATCCTTCCTCGTATTCTCAAATCGTTAGGCCAAAAGTATTCCAGCCTAGACCTCCAATTAATGGTTATTTCACCAAAACCACGATGGTTGATTTAACCATAGAACCAGAATTCGATGGACCCTCCGTCTACGAAGTCTATAATCAAATATTTCCTCACGAGTTTAACTTCTTACCGGAGGATCTTGCAAAGACTAGGACCTTCTACAAGTACATTTTAGTTGACTCAAAATCAGCTGAAATTACTCACGTCCCAGACAAAAATGATCCCTCTAAGATCATTTATTCAAAGTTGAGGATTTTTCGTGTTCTCACTCAATCTTACTAG

Coding sequence (CDS)

ATGGAACCGCCTCTTGGCTGGCAACGGCCACCAAATCAGCGGCAATCGCCGCAAAGCAATCAAAATAATAGTCCACAGAGACCTCCTCAAACAATAGCTTCCTCCTCAGAAACAATACCTTCCAAGGGAAAACCCTCAACTCAATCATCTGCACCGTCACCTATGAGTGCAGAAAATTACACCATGGATTTACAATTTGAACAAGTATCCAGGCGACGTCAAGGTTTTGCTCAAAGAACATTGACTATTCAATCAGACTCTTCGAGTCTTCCCCCAATACCTTCAACCGCATTGCTGCGTCCCTCTGGGCCAACAACTCCAAATAAGCGTGCTGCTTCCCCGACCGCTTCTTCCTCAAGCTCTGCAATTCCGAGGAATCCTTCCTCGTATTCTCAAATCGTTAGGCCAAAAGTATTCCAGCCTAGACCTCCAATTAATGGTTATTTCACCAAAACCACGATGGTTGATTTAACCATAGAACCAGAATTCGATGGACCCTCCGTCTACGAAGTCTATAATCAAATATTTCCTCACGAGTTTAACTTCTTACCGGAGGATCTTGCAAAGACTAGGACCTTCTACAAGTACATTTTAGTTGACTCAAAATCAGCTGAAATTACTCACGTCCCAGACAAAAATGATCCCTCTAAGATCATTTATTCAAAGTTGAGGATTTTTCGTGTTCTCACTCAATCTTACTAG

Protein sequence

MEPPLGWQRPPNQRQSPQSNQNNSPQRPPQTIASSSETIPSKGKPSTQSSAPSPMSAENYTMDLQFEQVSRRRQGFAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASPTASSSSSAIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTMVDLTIEPEFDGPSVYEVYNQIFPHEFNFLPEDLAKTRTFYKYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTQSY*

Homology

[Close]

BLAST of MELO3C025831 vs. TrEMBL
Match: A0A0A0LWK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G385050 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31
Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 1


Query: 154 MVDLTIEPEFDGPSVYEVYNQIFPHEFNFLPEDLAKTRTFYKYILVDSKSAEITHVPDKN 213
           MVDLTIEPEFDGPSV EV  Q+FPH FNFLPEDL+KTRTFY++ILVDSKSAEITHVPDKN
Sbjct: 1   MVDLTIEPEFDGPSVPEVCKQVFPHGFNFLPEDLSKTRTFYEFILVDSKSAEITHVPDKN 60

Query: 214 DPSKIIYSKLRIFRVLTQSY 234
           DPSKIIYSKLRIF+VLT SY
Sbjct: 61  DPSKIIYSKLRIFQVLTPSY 80

[Close]

BLAST of MELO3C025831 vs. TrEMBL
Match: A0A0A0LUE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G434180 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.5e-30
Identity = 68/80 (85.00%), Postives = 73/80 (91.25%), Query Frame = 1


Query: 154 MVDLTIEPEFDGPSVYEVYNQIFPHEFNFLPEDLAKTRTFYKYILVDSKSAEITHVPDKN 213
           MVDLTIEPEFD PSV+E+  QIFPH FNFLPEDLAKT+TFY++ILVDSKSAEITHVP KN
Sbjct: 1   MVDLTIEPEFDRPSVFELCKQIFPHGFNFLPEDLAKTKTFYEFILVDSKSAEITHVPYKN 60

Query: 214 DPSKIIYSKLRIFRVLTQSY 234
           DP KIIYSKLRIFRVLT SY
Sbjct: 61  DPLKIIYSKLRIFRVLTPSY 80

[Close]

BLAST of MELO3C025831 vs. TrEMBL
Match: E5GCE6_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.1e-21
Identity = 71/155 (45.81%), Postives = 96/155 (61.94%), Query Frame = 1


Query: 41  SKG-KPSTQS-SAPSPMSAENYTMDLQFEQVSRRRQGFAQRTLTIQSDSSSLPPIPSTAL 100
           SKG +PS+ S S PSPMSA  YTMDL F  V+R R   +   +   ++SS+ PP PS  L
Sbjct: 17  SKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIGSPTESST-PPRPSVNL 76

Query: 101 LRPSGPTTPNKRAASPTASSSSSAIPRNPSSYSQIVR-PKVFQPRPPINGYFTKTTMV-D 160
           +RPSG     +  ASP+++  SS     P++YSQ V   K F PRP I  YF K+ +V D
Sbjct: 77  IRPSGGVIQMRPPASPSSNRESST---PPTTYSQAVTLDKRFVPRPEIKSYFQKSIVVYD 136

Query: 161 LTIEPEFDGPSVYEVYNQIFPHEFNFLPEDLAKTR 192
             IEPE+   ++ E+ ++IFP +FNFLPEDL K +
Sbjct: 137 PIIEPEYQSLTLEEMVSKIFPKDFNFLPEDLKKKK 167

[Close]

BLAST of MELO3C025831 vs. TrEMBL
Match: F6H9U7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g00640 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.2e-14
Identity = 66/195 (33.85%), Postives = 94/195 (48.21%), Query Frame = 1


Query: 48  QSSAPSPMSAENYTMDLQFEQVSRRRQGFAQRTLTIQSDSSSLPPI-PSTALLRPS---- 107
           Q  + S  +  +Y M   F  VS       Q + + Q  S   PP+ PS + ++ S    
Sbjct: 8   QLPSSSKKTKASYAMISNFSNVSPTFP--LQTSNSFQVLSPDFPPLQPSKSFIQASKSNP 67

Query: 108 ------GPTTPNKRAASPTASSSSSAIPRNPSSYSQIVR-PKVFQPRPPINGYFTKTTMV 167
                 G ++P+  +  P+ S S S  P   SSYSQ V+ PK               T+ 
Sbjct: 68  KNILIQGHSSPSTISTLPSPSQSPSQSPSPSSSYSQYVKKPK---------------TLE 127

Query: 168 DLTIEPEFDGPSVYEVYNQIFPHEFNFLPEDLAKTRTFYKYILVDSKSAEITHVPDKNDP 227
              IEPEF+   + ++   IFP   NF   D  KTR FY++IL D+ S EITH  DKN+P
Sbjct: 128 IAFIEPEFNFEEIPKILPYIFPPGVNFNSNDPLKTRQFYEFILADTDSVEITHNTDKNNP 185

Query: 228 SKIIYSKLRIFRVLT 231
            +I +SK +I RV+T
Sbjct: 188 QRIAFSKCQILRVMT 185

[Close]

BLAST of MELO3C025831 vs. TrEMBL
Match: F6GVI8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g01320 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-13
Identity = 66/191 (34.55%), Postives = 95/191 (49.74%), Query Frame = 1


Query: 48  QSSAPSPMSAENYTMDLQFEQVSRRRQGFAQRTLTIQSDSSSLPPI-PSTALLRPSGPTT 107
           Q  + S  +  +Y M   F  V  R     Q + + Q  S   PP+ PS + ++ S  T 
Sbjct: 8   QLPSSSKKTKASYAMISNFSNV--RPTFPLQTSNSFQVLSPDFPPLQPSKSFIQASKSTP 67

Query: 108 PN---KRAASPTASSSSSAIPRNPS---SYSQIVR-PKVFQPRPPINGYFTKTTMVDLTI 167
            N   ++ +SP   S+  +  ++PS   SYSQ V+ PK               T+    I
Sbjct: 68  KNIVVQKQSSPNTISTLPSPSQSPSPSYSYSQYVKKPK---------------TLEIAFI 127

Query: 168 EPEFDGPSVYEVYNQIFPHEFNFLPEDLAKTRTFYKYILVDSKSAEITHVPDKNDPSKII 227
           EPEF    + ++   IFP   NF   D  KTR FY++ILVD+ S EITH  DKN+P +I 
Sbjct: 128 EPEFIFEEIPKILPYIFPQGVNFNSNDPLKTRQFYEFILVDTDSVEITHNTDKNNPQRIA 181

Query: 228 YSKLRIFRVLT 231
           +SK +I RV+T
Sbjct: 188 FSKCQILRVMT 181

[Close]

BLAST of MELO3C025831 vs. NCBI nr
Match: gi|700210273|gb|KGN65369.1| (hypothetical protein Csa_1G385050 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 1.4e-31
Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 1


Query: 154 MVDLTIEPEFDGPSVYEVYNQIFPHEFNFLPEDLAKTRTFYKYILVDSKSAEITHVPDKN 213
           MVDLTIEPEFDGPSV EV  Q+FPH FNFLPEDL+KTRTFY++ILVDSKSAEITHVPDKN
Sbjct: 1   MVDLTIEPEFDGPSVPEVCKQVFPHGFNFLPEDLSKTRTFYEFILVDSKSAEITHVPDKN 60

Query: 214 DPSKIIYSKLRIFRVLTQSY 234
           DPSKIIYSKLRIF+VLT SY
Sbjct: 61  DPSKIIYSKLRIFQVLTPSY 80

[Close]

BLAST of MELO3C025831 vs. NCBI nr
Match: gi|700210424|gb|KGN65520.1| (hypothetical protein Csa_1G434180 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 7.9e-30
Identity = 68/80 (85.00%), Postives = 73/80 (91.25%), Query Frame = 1


Query: 154 MVDLTIEPEFDGPSVYEVYNQIFPHEFNFLPEDLAKTRTFYKYILVDSKSAEITHVPDKN 213
           MVDLTIEPEFD PSV+E+  QIFPH FNFLPEDLAKT+TFY++ILVDSKSAEITHVP KN
Sbjct: 1   MVDLTIEPEFDRPSVFELCKQIFPHGFNFLPEDLAKTKTFYEFILVDSKSAEITHVPYKN 60

Query: 214 DPSKIIYSKLRIFRVLTQSY 234
           DP KIIYSKLRIFRVLT SY
Sbjct: 61  DPLKIIYSKLRIFRVLTPSY 80

[Close]

BLAST of MELO3C025831 vs. NCBI nr
Match: gi|307136323|gb|ADN34145.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 109.4 bits (272), Expect = 8.7e-21
Identity = 71/155 (45.81%), Postives = 96/155 (61.94%), Query Frame = 1


Query: 41  SKG-KPSTQS-SAPSPMSAENYTMDLQFEQVSRRRQGFAQRTLTIQSDSSSLPPIPSTAL 100
           SKG +PS+ S S PSPMSA  YTMDL F  V+R R   +   +   ++SS+ PP PS  L
Sbjct: 17  SKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIGSPTESST-PPRPSVNL 76

Query: 101 LRPSGPTTPNKRAASPTASSSSSAIPRNPSSYSQIVR-PKVFQPRPPINGYFTKTTMV-D 160
           +RPSG     +  ASP+++  SS     P++YSQ V   K F PRP I  YF K+ +V D
Sbjct: 77  IRPSGGVIQMRPPASPSSNRESST---PPTTYSQAVTLDKRFVPRPEIKSYFQKSIVVYD 136

Query: 161 LTIEPEFDGPSVYEVYNQIFPHEFNFLPEDLAKTR 192
             IEPE+   ++ E+ ++IFP +FNFLPEDL K +
Sbjct: 137 PIIEPEYQSLTLEEMVSKIFPKDFNFLPEDLKKKK 167

[Close]

BLAST of MELO3C025831 vs. NCBI nr
Match: gi|147767380|emb|CAN66723.1| (hypothetical protein VITISV_022330 [Vitis vinifera])

HSP 1 Score: 83.2 bits (204), Expect = 6.7e-13
Identity = 66/195 (33.85%), Postives = 96/195 (49.23%), Query Frame = 1


Query: 48  QSSAPSPMSAENYTMDLQFEQVSRRRQGFAQRTLTIQSDSSSLPPI-PSTALLRPSGPTT 107
           Q  + S  +  +Y M   F  V  R     Q + + Q  S   PP+ PS + ++ S  T 
Sbjct: 8   QLPSSSKKTKASYAMISNFSNV--RSTFPLQTSNSFQVLSPDFPPLQPSKSFIQASKSTP 67

Query: 108 PN---KRAASPTASSSSSAIPRNPS-------SYSQIVR-PKVFQPRPPINGYFTKTTMV 167
            N   +R +SP   S+  +  ++PS       SYSQ V+ PK               T+ 
Sbjct: 68  KNIVVQRQSSPNTISTLPSPSQSPSQSHSPSFSYSQYVKKPK---------------TLE 127

Query: 168 DLTIEPEFDGPSVYEVYNQIFPHEFNFLPEDLAKTRTFYKYILVDSKSAEITHVPDKNDP 227
              IEPEF+   + ++   IFP   NF   D  KTR FY++ILVD+ S EITH  DKN+P
Sbjct: 128 IAFIEPEFNFEEIPKILLYIFPQGVNFNSNDPLKTRQFYEFILVDTDSVEITHNTDKNNP 185

Query: 228 SKIIYSKLRIFRVLT 231
            +I +SK +I +V+T
Sbjct: 188 HRIAFSKCQILKVMT 185

[Close]

BLAST of MELO3C025831 vs. NCBI nr
Match: gi|147863969|emb|CAN83211.1| (hypothetical protein VITISV_010890 [Vitis vinifera])

HSP 1 Score: 80.5 bits (197), Expect = 4.3e-12
Identity = 56/152 (36.84%), Postives = 81/152 (53.29%), Query Frame = 1


Query: 87  SSSLPPI-PSTALLRPSGPTTPNKRAASPTASSSSSAIP---RNPS---SYSQIVR-PKV 146
           S   PP+ PS + ++ S  +  N    S ++ ++ S +P   ++PS   SYSQ V+ PK 
Sbjct: 36  SPDFPPLQPSKSFIQASKSSPKNIVVQSQSSPNTISTLPSPSQSPSPSYSYSQYVKKPK- 95

Query: 147 FQPRPPINGYFTKTTMVDLTIEPEFDGPSVYEVYNQIFPHEFNFLPEDLAKTRTFYKYIL 206
                         T+    IEPEF+   + ++   IFP   NF   D  KTR FY++IL
Sbjct: 96  --------------TLEIAFIEPEFNFEEIPKILPYIFPQGVNFNSNDPLKTRQFYEFIL 155

Query: 207 VDSKSAEITHVPDKNDPSKIIYSKLRIFRVLT 231
           VD+ S EITH  DKN+P  I +SK +I RV+T
Sbjct: 156 VDTDSVEITHNTDKNNPQXIAFSKCQILRVMT 172

The following BLAST results are available for this feature:

BLAST of MELO3C025831 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWK6_CUCSA	1.0e-31	87.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G385050 PE=4 SV=1	[more]
A0A0A0LUE7_CUCSA	5.5e-30	85.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G434180 PE=4 SV=1	[more]
E5GCE6_CUCME	6.1e-21	45.81	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
F6H9U7_VITVI	4.2e-14	33.85	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g00640 PE=4 SV=...	[more]
F6GVI8_VITVI	3.6e-13	34.55	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g01320 PE=4 SV=...	[more]

BLAST of MELO3C025831 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700210273\|gb\|KGN65369.1\|	1.4e-31	87.50	hypothetical protein Csa_1G385050 [Cucumis sativus]	[more]
gi\|700210424\|gb\|KGN65520.1\|	7.9e-30	85.00	hypothetical protein Csa_1G434180 [Cucumis sativus]	[more]
gi\|307136323\|gb\|ADN34145.1\|	8.7e-21	45.81	hypothetical protein [Cucumis melo subsp. melo]	[more]
gi\|147767380\|emb\|CAN66723.1\|	6.7e-13	33.85	hypothetical protein VITISV_022330 [Vitis vinifera]	[more]
gi\|147863969\|emb\|CAN83211.1\|	4.3e-12	36.84	hypothetical protein VITISV_010890 [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025831T1	MELO3C025831T1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025831	Wax gourd	mewgoB392
MELO3C025831	Cucumber (Gy14) v1	cgymeB560
MELO3C025831	Cucurbita maxima (Rimu)	cmameB230
MELO3C025831	Cucumber (Chinese Long) v2	cumeB220
MELO3C025831	Watermelon (Charleston Gray)	mewcgB342
MELO3C025831	Watermelon (97103) v1	mewmB363
MELO3C025831	Bottle gourd (USVL1VR-Ls)	lsimeB436
MELO3C025831	Cucumber (Gy14) v2	cgybmeB192