CU106582 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU106582
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 5161613 .. 5162122 (+)
Sequence length535
The following sequences are available for this feature:

transcribed_cluster sequence

TCCAAAGTGAGTTCGGAACTTCGCCGGAAGAAGAAGACGACGACTAAGAAAGAACATTTCTCCAAAAAGAAAAAAGAAAAATAAAAAAAGAAAGGAAAAGGAAAAAAGAACGACGCGGAAAATTGAGAGAAACAGAGAAAATCGTTTCGAAATTTCTCAATCTGAAAGAAACCAGAAATCGAAAGCACACGTTCTTCAATCCGGCGGAGATGGGGATTCAGAGATTAGAACTTTGTTTGGAGCTTCTGCGAATGGCTATCAATTTCGTGGTGGTCGTTGCCGAATCCGTGGGCGACGTTATACACCGGGAATGTCAACCGCAAGCTCTGCCGACGGCGGGCGGTAGAGTTCCGGTTCCTTTTGTGGGCTTTTACCCCTAAATTCATCCTCCGCTGCCGTCCGCGGCGGCGATGTGGCGATGTTCGTTCAAAGTTAGTGTGAATTTTGTTTTTTTTGTTTAGTAATTAAATGGAGGTATTATTGTAATTGATCTCTCTATTGGAAATAATCCAATTATCTTCTTTTTTTAGTAACG
BLAST of CU106582 vs. TrEMBL
Match: A0A0A0K3A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074910 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.8e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 3

Query: 210 MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 269
           MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP
Sbjct: 1   MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 56

Query: 270 329
           
Sbjct: 61  56

Query: 330 378
           
Sbjct: 121 56

BLAST of CU106582 vs. TrEMBL
Match: A0A0D2SML3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G239600 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.3e-06
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 3

Query: 210 MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGG-RVPVPFVGFYP 269
           M +Q+LE+C+EL+++A+ FVVVVAE+VG VIH+   P  +  +     PVP VGF P
Sbjct: 1   MVLQKLEMCVELMKLAVEFVVVVAEAVGIVIHQNHSPPVMTASRSFATPVPLVGFLP 57

Query: 270 329
           
Sbjct: 61  57

Query: 330 378
           
Sbjct: 121 57

BLAST of CU106582 vs. NCBI nr
Match: gi|659109833|ref|XP_008454905.1| (PREDICTED: uncharacterized protein LOC103495210 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 5.4e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 3

Query: 210 MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 269
           MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP
Sbjct: 1   MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 56

Query: 270 329
           
Sbjct: 61  56

Query: 330 378
           
Sbjct: 121 56

BLAST of CU106582 vs. NCBI nr
Match: gi|1009115522|ref|XP_015874275.1| (PREDICTED: uncharacterized protein LOC107411246 [Ziziphus jujuba])

HSP 1 Score: 69.3 bits (168), Expect = 7.6e-09
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 3

Query: 210 MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 269
           M IQR+E+C+ELL+MAI FV+VVAE+VG VIH+   P  + ++    P+PF+GFYP
Sbjct: 1   MVIQRIEMCVELLKMAIEFVIVVAEAVGIVIHQNMSPAFIRSSAYPTPLPFIGFYP 56

Query: 270 329
           
Sbjct: 61  56

Query: 330 378
           
Sbjct: 121 56

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K3A1_CUCSA3.8e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074910 PE=4 SV=1[more]
A0A0D2SML3_GOSRA9.3e-0649.12Uncharacterized protein OS=Gossypium raimondii GN=B456_005G239600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659109833|ref|XP_008454905.1|5.4e-23100.00PREDICTED: uncharacterized protein LOC103495210 [Cucumis melo][more]
gi|1009115522|ref|XP_015874275.1|7.6e-0955.36PREDICTED: uncharacterized protein LOC107411246 [Ziziphus jujuba][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G074910Csa7G074910gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02KHNTAFKNP3UI02KHNTAEST
FKNP3UI02KIZ2TFKNP3UI02KIZ2TEST
FKNP3UI02KJA7PFKNP3UI02KJA7PEST
FKNP3UI02KNFTUFKNP3UI02KNFTUEST
FKNP3UI02KUTCRFKNP3UI02KUTCREST
FKNP3UI02KWDVGFKNP3UI02KWDVGEST
FKNP3UI02KZCS8FKNP3UI02KZCS8EST
FKNP3UI02L5EZRFKNP3UI02L5EZREST
FKNP3UI02LI3WHFKNP3UI02LI3WHEST
FKNP3UI02LZ8RIFKNP3UI02LZ8RIEST
FKNP3UI02M0VS3FKNP3UI02M0VS3EST
FKNP3UI02M3ZWPFKNP3UI02M3ZWPEST
FKNP3UI02M65GZFKNP3UI02M65GZEST
FKNP3UI02M8MAUFKNP3UI02M8MAUEST
FKNP3UI02MATOTFKNP3UI02MATOTEST
FKNP3UI02MM2URFKNP3UI02MM2UREST
FKNP3UI02NA87OFKNP3UI02NA87OEST
FKNP3UI02OEJ30FKNP3UI02OEJ30EST
FKNP3UI02OHMMAFKNP3UI02OHMMAEST
G0008617G0008617EST
G0012915G0012915EST
G0027477G0027477EST
G0059218G0059218EST
G0119083G0119083EST
G0128489G0128489EST
G0160282G0160282EST
H0003323H0003323EST
H0071635H0071635EST
H0089733H0089733EST
csa01-3ms2-a06csa01-3ms2-a06EST
csa01-3ms4-b05csa01-3ms4-b05EST