MELO3C023994 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023994
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Structural constituent of ribosome, putative
Location	chr4 : 23833533 .. 23836912 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGATTTTGCAATTTGTAAGAGAAAAAAGTAAAAAAAAGGAAAAAAGAAAGATGATTTCGTTGGGACACTGTTTTTGGCGGTAAAATCAGTCATAGTCAGAGAGCTTAGACTCAAAGAGAGAATGAGACACAAAAATGTCCATTTCAAAGCTTCAAGATCTGAATGATGATGAAGATGAAGAACAAGAAGATCAATAAAAAATATCTTCTTTCCAAATAAATATCCTCTTCGTTCTCATTTCTCTTTTCTCCACACTCCAATTTCCCATTCCAATGGCGTTTTCTGCTTTCTCCCCTCTTCCATTCCCCGTCTCCTTAGGGTTCCGCCGCCCTCAATCTCCCACCACCGCCTTTCCTCGCCTTTCCTTCCCTGTTTCTGCTTCTTTGAGCTCTTCCTCTTCTGAATCTAAATCCGCTAAATCATCCTCCCCCACCGATAATCTTGTTTCCTCCTCAAATGGAACTACTCCCCCTTCCTTTGTTGAACCCTCCACACCTCCTGACTCTAATTTCCCTTACGCATTTCCTAACCCTACTCCTGCTGCGTCTGCTTCTCTTCACCCCATTCTTGGGTTTATGCAATCCACTGAATCTTCAATTGAGAGGGTAATTCTTCTTTTTCCTTTTCTTTTTCAATTGGGTTTTTTCTTTTTATATGTTGCTTAGTTTCCCTGTTGAAGCTCAAAGTTTGTACTGGCTGTAAATTTAATCAGTTAACATACTGTTGCTATTACTTGAGAGTATGGCAATTGAGCACATAAAGCTTTGAATGATTTGCTTATTCGAGTTCCAATGTGTTAAGGAATCGACATATAAAGAAAACAATAGAGAACGACACAGAGATATATGTGTTCACTGATATTGCGTCACCTACATTCACAGGTGAAAGGAGAACGGTTAATTGCTAAAGGAGAATTAGAATTACCAACTAGTTTACATTGTGCAATTCTCAAAATCTAGTATCAAAATCGTAAATAACAAATATGGAAAATACAATTCAGTCAGACGCTGTACTTGGCTATTTGCTAGATATCAGATTCAAGGCATTCTAACACTATGGTTCTAATATGTTCGAATTGAACTTATGCAATTGGATAATTAGATTTTTTATGTGAGGTTGATTTCTTCTTTTTCTAGTCTAATCTTTCATTTCTTAGATGGGCTAATGACTATTACCTGTTTCACTGTTGTTAAGCAGGTTATTTTTGACTTCCGTTTCTTGGCCCTGCTTGCGGTTGGGGGTTCACTGGCGGGTTCATTCTTGTGCTTTCTCAATGTACTTTCTTCAGCTCTCCTTAAAACTAGTTCACTACAGAAGTTTTTGGATACTACATATTATAATAAATTATTTTAACTATGCAACTGAATTCCTTTCGGATGACGTTCTGAATATTTATTGAAGATAAATCGTGCACACATTTTTCTATTGGAACATTTTCTTTTGTGTGATACTTAATTGCACATGTAGATTGACTACTCTTAGCTTGTCTGAAGGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCTAGCTGTGTCAAAGGAATTCACACCGGACAAATGGTTTTGCGACTTGTTGAAGCTATCGGTAGGGTCCTTGGACATTCACTACGATATCTCTTTTTTGTCTGAAATATATTCTTGTTAAAAATATGATTTGGGTTTTCCTTCTTGTGTTACGTTGTCACTATTACTTCTAGAAAAAATGAACTCCACATGTCATGGATCCTTTTATCTTGTTCATTAAACAATAATGAATTGCAACGTCATGCAGATGTATATCTTGCTGGAACCGTCATGTTAATTTTTGGGATGGGCCTGTATGGATTGTTTATCAGTAATGTGTCCCCTGATGAACCTCCTCTTGTTGATCGTGCCCTGAAAGGGTCCTCACTGTTTGGGATGTTTGCCTTGAAGGTAAACTAAAGACTTGCTATTTTTTATTGTTTACCTTCAAGAAAATCACTAGTGTGTCCTTCAAGCGTGCATTTACAGTACATTGCTTTCATTTAGATGAATGTTAAATCTTTACTGGATATTTAAGTTGATAGGTTCGGAAATATTTAGTCTTTCCTATATTCTGGATTTAGATAATTTGATTTAGAATTCTGACACATGAATTATTAATATCAATTAGGGAGGAAATAGAATCTTAAGAGTTGAACTCTGACCTTATGGTATGATATCATATTAAATAACTTAGACTCCTTACCAACAAAAATAATCTCATTTAGCCCCGAAGCTTAGATATAGTTGACTATGTTGAATAACCATTAGGCCCTGTACCAAGAAAGAACCTAAGTTTATTTACGGTATATTTGATCTTTTATATTTATTCAAGTCATCTGATGAAAACTGACAAATACTCATATGATAGGAACCAAAACACAATTGACTATGTTGAAATGTAAATGACGGAAAAACTTATAACATTGCCAAGTAACTAGAGAAACTTGAATCCTACCATCTTGAGATCCCTCTTAAACTCTAATTCACTCACCATAATATTTCTTTAACGACTCCCTTCCTCCCCTCTATATTTATTACCAAATATCAAAAGGTTTAAAACAACCTCAATAGCTAATTACTAAGATACCCTTAATGTTCTATTAAGACCCTATACGACTTCTATCATTATATTAGAATGGTTCTAAGCTAGAACTTGAATTCTGTTGAAGAAAATCTAAGATTCCAACAGAACTAGATTCTGTAAGCTTGATATGGTCTATGAAGGGAAATTATTGCTACTAGGTTATTCAGTGAGGATGGAAATCGTGGTGTTTGTATGGTTGTATTGTCTTGAAACTTTTGGAACAGAGAATGGACTATGAGCTTAGTTTTCGTGGTCAATGGTTCTCTTTTCCCTCTTGGACCCCATTTATAATTTTGGTGTTAATTGGTTGCAGGAGAGGCCAAAATGGATGAAAATTAGCTCCCTTGATGAGCTGAAAACAAAAGTTGGACATGTTATTGTGATGATTCTTTTAGTGAAAATGTTCGAGAGAAGCAAAATGGTAACAATAGCAACAGGTCTTGATCTACTCAGCTATTCTGTTTGCATTTTCTTGTCTTCGGCTTCTTTATACATCCTACATAATCTACACAGGCCAGAATAGGAATACAGAGCTTTGAAATTTATCAGATGAAGCCTCTATCTGTTTTGTTTATACTCTTTATGTTCTCTTATGTATGTCAGTGTAAGAGCCGAATGCATTATTTTCTGTCCTAAATCTCCTGGTATTACAAAAGATTGTAGCTTCCTGTAGGAATAGTTGTCCTGTGTATACTTGTTGTTTGGCTCTATTGTATATATACTTTCATCTGTATAAATATGATTGTTTGTACACGTATTATTTAATCATTTTAAGCGATC

mRNA sequence

GTTGATTTTGCAATTTGTAAGAGAAAAAAGTAAAAAAAAGGAAAAAAGAAAGATGATTTCGTTGGGACACTGTTTTTGGCGGTAAAATCAGTCATAGTCAGAGAGCTTAGACTCAAAGAGAGAATGAGACACAAAAATGTCCATTTCAAAGCTTCAAGATCTGAATGATGATGAAGATGAAGAACAAGAAGATCAATAAAAAATATCTTCTTTCCAAATAAATATCCTCTTCGTTCTCATTTCTCTTTTCTCCACACTCCAATTTCCCATTCCAATGGCGTTTTCTGCTTTCTCCCCTCTTCCATTCCCCGTCTCCTTAGGGTTCCGCCGCCCTCAATCTCCCACCACCGCCTTTCCTCGCCTTTCCTTCCCTGTTTCTGCTTCTTTGAGCTCTTCCTCTTCTGAATCTAAATCCGCTAAATCATCCTCCCCCACCGATAATCTTGTTTCCTCCTCAAATGGAACTACTCCCCCTTCCTTTGTTGAACCCTCCACACCTCCTGACTCTAATTTCCCTTACGCATTTCCTAACCCTACTCCTGCTGCGTCTGCTTCTCTTCACCCCATTCTTGGGTTTATGCAATCCACTGAATCTTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCCCTGCTTGCGGTTGGGGGTTCACTGGCGGGTTCATTCTTGTGCTTTCTCAATGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCTAGCTGTGTCAAAGGAATTCACACCGGACAAATGGTTTTGCGACTTGTTGAAGCTATCGATGTATATCTTGCTGGAACCGTCATGTTAATTTTTGGGATGGGCCTGTATGGATTGTTTATCAGTAATGTGTCCCCTGATGAACCTCCTCTTGTTGATCGTGCCCTGAAAGGGTCCTCACTGTTTGGGATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCCCTTGATGAGCTGAAAACAAAAGTTGGACATGTTATTGTGATGATTCTTTTAGTGAAAATGTTCGAGAGAAGCAAAATGGTAACAATAGCAACAGGTCTTGATCTACTCAGCTATTCTGTTTGCATTTTCTTGTCTTCGGCTTCTTTATACATCCTACATAATCTACACAGGCCAGAATAGGAATACAGAGCTTTGAAATTTATCAGATGAAGCCTCTATCTGTTTTGTTTATACTCTTTATGTTCTCTTATGTATGTCAGTGTAAGAGCCGAATGCATTATTTTCTGTCCTAAATCTCCTGGTATTACAAAAGATTGTAGCTTCCTGTAGGAATAGTTGTCCTGTGTATACTTGTTGTTTGGCTCTATTGTATATATACTTTCATCTGTATAAATATGATTGTTTGTACACGTATTATTTAATCATTTTAAGCGATC

Coding sequence (CDS)

ATGGCGTTTTCTGCTTTCTCCCCTCTTCCATTCCCCGTCTCCTTAGGGTTCCGCCGCCCTCAATCTCCCACCACCGCCTTTCCTCGCCTTTCCTTCCCTGTTTCTGCTTCTTTGAGCTCTTCCTCTTCTGAATCTAAATCCGCTAAATCATCCTCCCCCACCGATAATCTTGTTTCCTCCTCAAATGGAACTACTCCCCCTTCCTTTGTTGAACCCTCCACACCTCCTGACTCTAATTTCCCTTACGCATTTCCTAACCCTACTCCTGCTGCGTCTGCTTCTCTTCACCCCATTCTTGGGTTTATGCAATCCACTGAATCTTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCCCTGCTTGCGGTTGGGGGTTCACTGGCGGGTTCATTCTTGTGCTTTCTCAATGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCTAGCTGTGTCAAAGGAATTCACACCGGACAAATGGTTTTGCGACTTGTTGAAGCTATCGATGTATATCTTGCTGGAACCGTCATGTTAATTTTTGGGATGGGCCTGTATGGATTGTTTATCAGTAATGTGTCCCCTGATGAACCTCCTCTTGTTGATCGTGCCCTGAAAGGGTCCTCACTGTTTGGGATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCCCTTGATGAGCTGAAAACAAAAGTTGGACATGTTATTGTGATGATTCTTTTAGTGAAAATGTTCGAGAGAAGCAAAATGGTAACAATAGCAACAGGTCTTGATCTACTCAGCTATTCTGTTTGCATTTTCTTGTCTTCGGCTTCTTTATACATCCTACATAATCTACACAGGCCAGAATAG

Protein sequence

MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSSSNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE*

Homology

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BLAST of MELO3C023994 vs. TrEMBL
Match: A0A0A0LCC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G687750 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 1.5e-151
Identity = 275/289 (95.16%), Postives = 280/289 (96.89%), Query Frame = 1


Query: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSS 60
           MAFSAFSPLPFP+SLGFRRPQSPTTAFPRL FP+S+SLSSSSSESKSAKSSSPTDNLVSS
Sbjct: 1   MAFSAFSPLPFPLSLGFRRPQSPTTAFPRLPFPISSSLSSSSSESKSAKSSSPTDNLVSS 60

Query: 61  SNGTTP--PSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRF 120
           SNGTTP  PSFV+PSTPP SNF YAFPNPTP ASASLHPILGFMQS ESSIERVIFDFRF
Sbjct: 61  SNGTTPPSPSFVDPSTPPHSNFTYAFPNPTPPASASLHPILGFMQSAESSIERVIFDFRF 120

Query: 121 LALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180
           LAL AVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV
Sbjct: 121 LALFAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180

Query: 181 MLIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGH 240
           MLIFGMGLYGLFISNVSPDEPP VDRAL+GSSLFGMFALKERPKWMKISSLDELKTKVGH
Sbjct: 181 MLIFGMGLYGLFISNVSPDEPPSVDRALQGSSLFGMFALKERPKWMKISSLDELKTKVGH 240

Query: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 289

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BLAST of MELO3C023994 vs. TrEMBL
Match: A0A067L571_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16864 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.9e-102
Identity = 208/285 (72.98%), Postives = 225/285 (78.95%), Query Frame = 1


Query: 3   FSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSSSN 62
           FS+    P  +S   R+P        RL FP++   SSS S  +SA +   T  L SS  
Sbjct: 4   FSSILTSPLSISTPIRQPIKIKR---RLLFPLATLSSSSPSSPESAAAPVTTRPLDSSKT 63

Query: 63  GTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLALL 122
            +T  +FVE S   DS+F YA  NPT       +P + F++STES+IERVIFDFRFLALL
Sbjct: 64  PST--TFVESSRTHDSSFNYALANPT-----GNNPFVRFVRSTESNIERVIFDFRFLALL 123

Query: 123 AVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF 182
           A+GGSLAGS LCFLNGCVYI DAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF
Sbjct: 124 AIGGSLAGSLLCFLNGCVYIFDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF 183

Query: 183 GMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM 242
           GMGLYGLFISNV PD  P VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM
Sbjct: 184 GMGLYGLFISNVPPDVSPQVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM 243

Query: 243 ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           ILLVKMFERSKMVTIATG DLLSYSVCIFLSSASLYILHNLH+ E
Sbjct: 244 ILLVKMFERSKMVTIATGTDLLSYSVCIFLSSASLYILHNLHKSE 278

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BLAST of MELO3C023994 vs. TrEMBL
Match: A0A0B2SL53_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_039995 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.1e-101
Identity = 199/265 (75.09%), Postives = 218/265 (82.26%), Query Frame = 1


Query: 23  PTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSSSNGTTPPSFVEPSTPPDSNFPY 82
           P +  PR  F   ASLSSSS ESK+++S S      S+++ TT P+    S PPD  F Y
Sbjct: 14  PPSHIPRRLFCPKASLSSSSPESKASQSVS------SATSTTTSPTPSVESRPPDPAFNY 73

Query: 83  AFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLALLAVGGSLAGSFLCFLNGCVYI 142
           A  NP        +PI+  +++TESSIERVIFDFRFLALLAVGGSLAGS LCFLNGC+YI
Sbjct: 74  ALTNPNG------NPIVRIVRATESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCIYI 133

Query: 143 CDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEPPLV 202
            DAYKVYWSSCVKG+HTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNV PD PP V
Sbjct: 134 IDAYKVYWSSCVKGVHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVPPDVPPTV 193

Query: 203 DRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLD 262
           DRALKGSSLFGMFA+KERPKWMKI SLDELKTKVGHVIVMILLVKMFERSKMVTI TGLD
Sbjct: 194 DRALKGSSLFGMFAMKERPKWMKICSLDELKTKVGHVIVMILLVKMFERSKMVTIVTGLD 253

Query: 263 LLSYSVCIFLSSASLYILHNLHRPE 288
           LL YS+CIFLSSASLYILHNLH+ +
Sbjct: 254 LLCYSICIFLSSASLYILHNLHKSD 266

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BLAST of MELO3C023994 vs. TrEMBL
Match: D7T379_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g00200 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.1e-101
Identity = 207/287 (72.13%), Postives = 229/287 (79.79%), Query Frame = 1


Query: 3   FSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKS--SSPTDNLVSS 62
           F+A S  P  +SL   RP +    F     P  AS+SSSS ES       S PT+ ++SS
Sbjct: 4   FAAMSYTPLSLSLSRLRPPTNHRRFS----PCLASVSSSSHESSPPPPPPSPPTETILSS 63

Query: 63  SNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLA 122
           +  + P   VE S P +S + YA P+P  +      PI+ F++ +ESSIERVIFDFRFLA
Sbjct: 64  NPPSKP--LVESSRPLNSTYNYALPDPKAS------PIVRFVRYSESSIERVIFDFRFLA 123

Query: 123 LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML 182
           LLAVGGSLAGS LCFLNGCVYI DAYKVYW+SCVKGIHTG+MVLRLVEAIDVYLAGTVML
Sbjct: 124 LLAVGGSLAGSLLCFLNGCVYIVDAYKVYWTSCVKGIHTGKMVLRLVEAIDVYLAGTVML 183

Query: 183 IFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 242
           IFGMGLYGLFISNV PD PP VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI
Sbjct: 184 IFGMGLYGLFISNVPPDVPPSVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 243

Query: 243 VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           VMILLVKMFERSKMVTIATG+DLLSYSVCIFLSSASLYIL+NLH+ E
Sbjct: 244 VMILLVKMFERSKMVTIATGMDLLSYSVCIFLSSASLYILNNLHKAE 278

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BLAST of MELO3C023994 vs. TrEMBL
Match: K7MEA1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G276700 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.1e-101
Identity = 199/265 (75.09%), Postives = 218/265 (82.26%), Query Frame = 1


Query: 23  PTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSSSNGTTPPSFVEPSTPPDSNFPY 82
           P +  PR  F   ASLSSSS ESK+++S S      S+++ TT P+    S PPD  F Y
Sbjct: 14  PPSHIPRRLFCPKASLSSSSPESKASQSVS------SATSTTTSPTPSVESRPPDPAFNY 73

Query: 83  AFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLALLAVGGSLAGSFLCFLNGCVYI 142
           A  NP        +PI+  +++TESSIERVIFDFRFLALLAVGGSLAGS LCFLNGC+YI
Sbjct: 74  ALTNPNG------NPIVRIVRATESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCIYI 133

Query: 143 CDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEPPLV 202
            DAYKVYWSSCVKG+HTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNV PD PP V
Sbjct: 134 IDAYKVYWSSCVKGVHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVPPDVPPTV 193

Query: 203 DRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLD 262
           DRALKGSSLFGMFA+KERPKWMKI SLDELKTKVGHVIVMILLVKMFERSKMVTI TGLD
Sbjct: 194 DRALKGSSLFGMFAMKERPKWMKICSLDELKTKVGHVIVMILLVKMFERSKMVTIVTGLD 253

Query: 263 LLSYSVCIFLSSASLYILHNLHRPE 288
           LL YS+CIFLSSASLYILHNLH+ +
Sbjct: 254 LLCYSICIFLSSASLYILHNLHKSD 266

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BLAST of MELO3C023994 vs. TAIR10
Match: AT5G13720.1 (AT5G13720.1 Uncharacterised protein family (UPF0114))

HSP 1 Score: 332.0 bits (850), Expect = 3.6e-91
Identity = 171/225 (76.00%), Postives = 185/225 (82.22%), Query Frame = 1


Query: 73  STPPDSNFPYAFPNPTPAASASL----------HPILGFMQSTESSIERVIFDFRFLALL 132
           S+PP+S+   + P   P    +L           P   F +STES++ER+IFDFRFLALL
Sbjct: 37  SSPPESSASSSIPTSIPVNGNTLPSSYGTRKDDSPFAQFFRSTESNVERIIFDFRFLALL 96

Query: 133 AVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF 192
           AVGGSLAGS LCFLNGCVYI +AYKVYW++C KGIHTGQMVLRLVEAIDVYLAGTVMLIF
Sbjct: 97  AVGGSLAGSLLCFLNGCVYIVEAYKVYWTNCSKGIHTGQMVLRLVEAIDVYLAGTVMLIF 156

Query: 193 GMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM 252
            MGLYGLFIS+   D PP  DRAL+ SSLFGMFA+KERPKWMKISSLDELKTKVGHVIVM
Sbjct: 157 SMGLYGLFISHSPHDVPPESDRALRSSSLFGMFAMKERPKWMKISSLDELKTKVGHVIVM 216

Query: 253 ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH+ E
Sbjct: 217 ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHKGE 261

[Close]

BLAST of MELO3C023994 vs. TAIR10
Match: AT4G19390.1 (AT4G19390.1 Uncharacterised protein family (UPF0114))

HSP 1 Score: 185.3 bits (469), Expect = 5.4e-47
Identity = 104/240 (43.33%), Postives = 142/240 (59.17%), Query Frame = 1


Query: 57  LVSSSNGTTPPSFVEPS-TPPDSNFPYAFPNPTPAASASLHPILGF-----------MQS 116
           ++SS  G   PS    + T  D ++ Y  P    +AS S                   ++
Sbjct: 37  VISSFRGLKLPSRTTKTITSSDWSWSYRSPGRLASASTSTSASTSTSAAVTSNSTNRFEA 96

Query: 117 TESSIERVIFDFRFLALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVL 176
            E  IE+VI+  RF+  L   GSL GS LCF+ GC+Y+ D++  Y       ++ G+++ 
Sbjct: 97  LEEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGCMYVVDSFLQY------SVNRGKVIF 156

Query: 177 RLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWM 236
            LVEAID+YL GTVML+FG+GLY LFISN+   E    D     SSLFGMF LKERP+W+
Sbjct: 157 LLVEAIDIYLLGTVMLVFGLGLYELFISNLDTSESRTHDIVSNRSSLFGMFTLKERPQWL 216

Query: 237 KISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH 285
           ++ S+ ELKTK+GHVIVM+LL+ +F++SK V I +  DLL  SV IF SSA L++L  L+
Sbjct: 217 EVKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLCISVSIFFSSACLFLLSRLN 270

[Close]

BLAST of MELO3C023994 vs. NCBI nr
Match: gi|659123749|ref|XP_008461820.1| (PREDICTED: uncharacterized protein LOC103500330 [Cucumis melo])

HSP 1 Score: 569.3 bits (1466), Expect = 3.8e-159
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 1


Query: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSS 60
           MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSS
Sbjct: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSS 60

Query: 61  SNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLA 120
           SNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLA
Sbjct: 61  SNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLA 120

Query: 121 LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML 180
           LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML
Sbjct: 121 LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML 180

Query: 181 IFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 240
           IFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI
Sbjct: 181 IFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 240

Query: 241 VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 287

[Close]

BLAST of MELO3C023994 vs. NCBI nr
Match: gi|778682741|ref|XP_011651765.1| (PREDICTED: uncharacterized protein LOC101217857 [Cucumis sativus])

HSP 1 Score: 543.5 bits (1399), Expect = 2.2e-151
Identity = 275/289 (95.16%), Postives = 280/289 (96.89%), Query Frame = 1


Query: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSS 60
           MAFSAFSPLPFP+SLGFRRPQSPTTAFPRL FP+S+SLSSSSSESKSAKSSSPTDNLVSS
Sbjct: 1   MAFSAFSPLPFPLSLGFRRPQSPTTAFPRLPFPISSSLSSSSSESKSAKSSSPTDNLVSS 60

Query: 61  SNGTTP--PSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRF 120
           SNGTTP  PSFV+PSTPP SNF YAFPNPTP ASASLHPILGFMQS ESSIERVIFDFRF
Sbjct: 61  SNGTTPPSPSFVDPSTPPHSNFTYAFPNPTPPASASLHPILGFMQSAESSIERVIFDFRF 120

Query: 121 LALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180
           LAL AVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV
Sbjct: 121 LALFAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180

Query: 181 MLIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGH 240
           MLIFGMGLYGLFISNVSPDEPP VDRAL+GSSLFGMFALKERPKWMKISSLDELKTKVGH
Sbjct: 181 MLIFGMGLYGLFISNVSPDEPPSVDRALQGSSLFGMFALKERPKWMKISSLDELKTKVGH 240

Query: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 289

[Close]

BLAST of MELO3C023994 vs. NCBI nr
Match: gi|1009129568|ref|XP_015881836.1| (PREDICTED: uncharacterized protein LOC107417715 [Ziziphus jujuba])

HSP 1 Score: 388.7 bits (997), Expect = 9.2e-105
Identity = 209/288 (72.57%), Postives = 234/288 (81.25%), Query Frame = 1


Query: 3   FSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSP--TDNLVSS 62
           F++ S  P  VS   RR  + +  F   + P  ASLSSSSS  +S   S+P  T+ +VSS
Sbjct: 4   FTSISTAPVKVSFPIRRRFNHSDRF--FTKPTIASLSSSSSSPESKSKSNPPRTETVVSS 63

Query: 63  SNGTTPPSFVE-PSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFL 122
           +  + P  FVE PS PP+S F YA  NP        +P++ F++STES+IER IFDFRFL
Sbjct: 64  ATSSNP--FVEKPSKPPESGFNYALSNPNG------NPVVRFVRSTESTIERTIFDFRFL 123

Query: 123 ALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 182
           ALLA+GGSLAGS LCFLNGCVYI +AYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM
Sbjct: 124 ALLAIGGSLAGSLLCFLNGCVYIVEAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 183

Query: 183 LIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 242
           LIFGMGLYGLFISNV PD PP VDRALKGSSLFGMFA+KERPKWMKISSLDELKTKVGHV
Sbjct: 184 LIFGMGLYGLFISNVPPDVPPSVDRALKGSSLFGMFAMKERPKWMKISSLDELKTKVGHV 243

Query: 243 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           IVMILLVKMFERSKMVTIA+GLDLLSYS+CIFLSSASLYILH+LH+ E
Sbjct: 244 IVMILLVKMFERSKMVTIASGLDLLSYSICIFLSSASLYILHHLHKSE 281

[Close]

BLAST of MELO3C023994 vs. NCBI nr
Match: gi|747044240|ref|XP_011088022.1| (PREDICTED: uncharacterized protein LOC105169335 [Sesamum indicum])

HSP 1 Score: 387.1 bits (993), Expect = 2.7e-104
Identity = 211/291 (72.51%), Postives = 234/291 (80.41%), Query Frame = 1


Query: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLS---SSSSESKSAKSSSPTDNL 60
           MA  + S    P+SL    P S   A  +LS P  ASLS   SSSS S+ + S++ T+N 
Sbjct: 1   MALISSSVSANPLSLCISTPHSSRKARRKLS-PSLASLSPSSSSSSASQESTSATKTENF 60

Query: 61  VSSSNGTTPPS-FVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDF 120
             S+ G++P + FVEP TPP+  + YA  NP        +P++ F+QSTES+IERVIFDF
Sbjct: 61  GVSTKGSSPRAPFVEPLTPPELPYNYALANPNG------NPVVQFVQSTESTIERVIFDF 120

Query: 121 RFLALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAG 180
           RFLALLAVGGSLAGS LCFLNGCVYI DAYKVYW+SCVKGIHTG+MVLRLVEAIDVYLAG
Sbjct: 121 RFLALLAVGGSLAGSLLCFLNGCVYIFDAYKVYWTSCVKGIHTGKMVLRLVEAIDVYLAG 180

Query: 181 TVMLIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKV 240
           TVMLIFGMGLYGLFISNVS D PP  DRAL GSSLFGMFALKERPKWMKISSLDELKTKV
Sbjct: 181 TVMLIFGMGLYGLFISNVSADVPPSTDRALTGSSLFGMFALKERPKWMKISSLDELKTKV 240

Query: 241 GHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           GHVIVMILLVKMFERSKMVTI TG DLLSYS+CIFLSSASLYILHNLH+PE
Sbjct: 241 GHVIVMILLVKMFERSKMVTITTGTDLLSYSICIFLSSASLYILHNLHKPE 284

[Close]

BLAST of MELO3C023994 vs. NCBI nr
Match: gi|802555766|ref|XP_012065612.1| (PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas])

HSP 1 Score: 379.4 bits (973), Expect = 5.6e-102
Identity = 208/285 (72.98%), Postives = 225/285 (78.95%), Query Frame = 1


Query: 3   FSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSSSN 62
           FS+    P  +S   R+P        RL FP++   SSS S  +SA +   T  L SS  
Sbjct: 4   FSSILTSPLSISTPIRQPIKIKR---RLLFPLATLSSSSPSSPESAAAPVTTRPLDSSKT 63

Query: 63  GTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLALL 122
            +T  +FVE S   DS+F YA  NPT       +P + F++STES+IERVIFDFRFLALL
Sbjct: 64  PST--TFVESSRTHDSSFNYALANPT-----GNNPFVRFVRSTESNIERVIFDFRFLALL 123

Query: 123 AVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF 182
           A+GGSLAGS LCFLNGCVYI DAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF
Sbjct: 124 AIGGSLAGSLLCFLNGCVYIFDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF 183

Query: 183 GMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM 242
           GMGLYGLFISNV PD  P VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM
Sbjct: 184 GMGLYGLFISNVPPDVSPQVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM 243

Query: 243 ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           ILLVKMFERSKMVTIATG DLLSYSVCIFLSSASLYILHNLH+ E
Sbjct: 244 ILLVKMFERSKMVTIATGTDLLSYSVCIFLSSASLYILHNLHKSE 278

The following BLAST results are available for this feature:

BLAST of MELO3C023994 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCC7_CUCSA	1.5e-151	95.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G687750 PE=4 SV=1	[more]
A0A067L571_JATCU	3.9e-102	72.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16864 PE=4 SV=1	[more]
A0A0B2SL53_GLYSO	1.1e-101	75.09	Uncharacterized protein OS=Glycine soja GN=glysoja_039995 PE=4 SV=1	[more]
D7T379_VITVI	1.1e-101	72.13	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g00200 PE=4 SV=...	[more]
K7MEA1_SOYBN	1.1e-101	75.09	Uncharacterized protein OS=Glycine max GN=GLYMA_15G276700 PE=4 SV=1	[more]

BLAST of MELO3C023994 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13720.1	3.6e-91	76.00	Uncharacterised protein family (UPF0114)	[more]
AT4G19390.1	5.4e-47	43.33	Uncharacterised protein family (UPF0114)	[more]

BLAST of MELO3C023994 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123749\|ref\|XP_008461820.1\|	3.8e-159	100.00	PREDICTED: uncharacterized protein LOC103500330 [Cucumis melo]	[more]
gi\|778682741\|ref\|XP_011651765.1\|	2.2e-151	95.16	PREDICTED: uncharacterized protein LOC101217857 [Cucumis sativus]	[more]
gi\|1009129568\|ref\|XP_015881836.1\|	9.2e-105	72.57	PREDICTED: uncharacterized protein LOC107417715 [Ziziphus jujuba]	[more]
gi\|747044240\|ref\|XP_011088022.1\|	2.7e-104	72.51	PREDICTED: uncharacterized protein LOC105169335 [Sesamum indicum]	[more]
gi\|802555766\|ref\|XP_012065612.1\|	5.6e-102	72.98	PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005134	UPF0114
IPR016804	UPF0114_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010501	RNA secondary structure unwinding
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004004	ATP-dependent RNA helicase activity
molecular_function	GO:0003723	RNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU54438	melon EST collection version 4.0	transcribed_cluster
MU54999	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023994T1	MELO3C023994T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU54438	MU54438	transcribed_cluster
MU54999	MU54999	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005134	Uncharacterised protein family UPF0114	PFAM	PF03350	UPF0114	coord: 113..251 score: 1.2
IPR016804	Uncharacterised protein family UPF0114, plant	PIR	PIRSF022348	UCP022348	coord: 10..287 score: 5.2E
None	No IPR available	PANTHER	PTHR31721	FAMILY NOT NAMED	coord: 41..287 score: 1.3E
None	No IPR available	PANTHER	PTHR31721:SF1	SUBFAMILY NOT NAMED	coord: 41..287 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C023994	Csa3G687750	Cucumber (Chinese Long) v2	cumeB207
MELO3C023994	Cla017284	Watermelon (97103) v1	mewmB346
MELO3C023994	ClCG10G012200	Watermelon (Charleston Gray)	mewcgB315
MELO3C023994	Cla97C10G195020	Watermelon (97103) v2	mewmbB316
MELO3C023994	Bhi11G001163	Wax gourd	mewgoB374
MELO3C023994	CSPI03G29530	Wild cucumber (PI 183967)	cpimeB199
MELO3C023994	Cucsa.248930	Cucumber (Gy14) v1	cgymeB420
MELO3C023994	CmaCh14G009870	Cucurbita maxima (Rimu)	cmameB226
MELO3C023994	CmaCh01G002380	Cucurbita maxima (Rimu)	cmameB426
MELO3C023994	CmoCh01G002470	Cucurbita moschata (Rifu)	cmomeB416
MELO3C023994	CmoCh14G010100	Cucurbita moschata (Rifu)	cmomeB210
MELO3C023994	Lsi03G011950	Bottle gourd (USVL1VR-Ls)	lsimeB260
MELO3C023994	Cp4.1LG02g15590	Cucurbita pepo (Zucchini)	cpemeB517
MELO3C023994	Cp4.1LG03g04630	Cucurbita pepo (Zucchini)	cpemeB566
MELO3C023994	CsGy3G027370	Cucumber (Gy14) v2	cgybmeB172
MELO3C023994	Carg11210	Silver-seed gourd	carmeB0811
MELO3C023994	Carg07333	Silver-seed gourd	carmeB0755
MELO3C023994	CsaV3_3G031980	Cucumber (Chinese Long) v3	cucmeB205

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C023994	Melon (DHL92) v3.5.1	memeB083
MELO3C023994	Cucumber (Gy14) v1	cgymeB206
MELO3C023994	Cucurbita maxima (Rimu)	cmameB333
MELO3C023994	Cucurbita maxima (Rimu)	cmameB842
MELO3C023994	Cucurbita moschata (Rifu)	cmomeB326
MELO3C023994	Cucurbita moschata (Rifu)	cmomeB824
MELO3C023994	Wild cucumber (PI 183967)	cpimeB559
MELO3C023994	Cucumber (Chinese Long) v2	cumeB551
MELO3C023994	Watermelon (Charleston Gray)	mewcgB313
MELO3C023994	Cucurbita pepo (Zucchini)	cpemeB133
MELO3C023994	Cucurbita pepo (Zucchini)	cpemeB308
MELO3C023994	Bottle gourd (USVL1VR-Ls)	lsimeB212
MELO3C023994	Cucumber (Gy14) v2	cgybmeB488
MELO3C023994	Silver-seed gourd	carmeB0457
MELO3C023994	Cucumber (Chinese Long) v3	cucmeB570