CU122957 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU122957
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 3651821 .. 3652015 (+)
Sequence length204
The following sequences are available for this feature:

transcribed_cluster sequence

GATACGTTGTTGCGTAGGCGATCAAACGCTGGAGGTGGGTTGTATTGCAGATCTGAGGTGGGTTGCGCCGTCATCTGATCGTGACCCGAGAGAAGCCGCGTCGCCGTCGTAGTAGCCGCTGCCGGAGAGAAATGAGAATTGCAAGAGAAAGAGACAAGTGCGAACCGCTGGGTTGCTTGTAGTCTCTTTTTTCTAATTCCCCGG
Library categoryESTs
fruit (8DPP) library1
BLAST of CU122957 vs. TrEMBL
Match: A0A0A0L663_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063670 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.0e-10
Identity = 36/51 (70.59%), Postives = 38/51 (74.51%), Query Frame = -2

Query: 3   SFSCNSHFSPXXXXXXXX-RLLSGHDQMTAQPTSDLQYNPPPAFDRLRNNV 62
           S +   HFSP         RLLSGHDQ+TAQPTSDLQYNPPPAFDRLRNNV
Sbjct: 5   SINEEDHFSPTFTATTTATRLLSGHDQVTAQPTSDLQYNPPPAFDRLRNNV 55

Query: 63  122
           
Sbjct: 65  55

Query: 123 153
           
Sbjct: 125 55

BLAST of CU122957 vs. NCBI nr
Match: gi|700200934|gb|KGN56067.1| (hypothetical protein Csa_3G063670 [Cucumis sativus])

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-10
Identity = 36/51 (70.59%), Postives = 38/51 (74.51%), Query Frame = -2

Query: 3   SFSCNSHFSPXXXXXXXX-RLLSGHDQMTAQPTSDLQYNPPPAFDRLRNNV 62
           S +   HFSP         RLLSGHDQ+TAQPTSDLQYNPPPAFDRLRNNV
Sbjct: 5   SINEEDHFSPTFTATTTATRLLSGHDQVTAQPTSDLQYNPPPAFDRLRNNV 55

Query: 63  122
           
Sbjct: 65  55

Query: 123 153
           
Sbjct: 125 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L663_CUCSA4.0e-1070.59Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063670 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700200934|gb|KGN56067.1|4.4e-1070.59hypothetical protein Csa_3G063670 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G063670Csa3G063670gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02K5D46FKNP3UI02K5D46EST