CU142068 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU142068
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 11580698 .. 11580847 (-)
Sequence length149
The following sequences are available for this feature:

transcribed_cluster sequence

GGGAGGGAAAAGGGTTTAGTTGAATACAGAGGAAGATTTGAGAGCTTGGTCCCAGAGAAGAGCGCCGCGGCGCATCAGAACATTGGTGGCGCCCCAAACGAGACCGATAGCAACCATTTTTTTCTACATCTCCGATCATCATTTTTCCC
Library categoryESTs
gynoecious flower library1
BLAST of CU142068 vs. TrEMBL
Match: A0A0A0LT65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G202290 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.7e-08
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = -3

Query: 28  KKMVAIGLVWGATNVLMRRGALLWDQALKSSS 87
           +KMVAIGLVWGATNVLMRRGALLWDQALKSSS
Sbjct: 7   EKMVAIGLVWGATNVLMRRGALLWDQALKSSS 38

Query: 88  124
           
Sbjct: 67  38

BLAST of CU142068 vs. TrEMBL
Match: M5VRJ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013135mg PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-07
Identity = 28/32 (87.50%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 28  KKMVAIGLVWGATNVLMRRGALLWDQALKSSS 87
           +KM+A+GLVWGATN LMRRGALLWDQALKSSS
Sbjct: 6   EKMIAVGLVWGATNALMRRGALLWDQALKSSS 37

Query: 88  124
           
Sbjct: 66  37

BLAST of CU142068 vs. TrEMBL
Match: A0A0B2SBH4_GLYSO (Transmembrane protein 234 like OS=Glycine soja GN=glysoja_036398 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-06
Identity = 24/32 (75.00%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 28  KKMVAIGLVWGATNVLMRRGALLWDQALKSSS 87
           +KM+A+G+VWGATN +MRRGALLWD+ALKSS+
Sbjct: 2   EKMIAVGIVWGATNAIMRRGALLWDEALKSSA 33

Query: 88  124
           
Sbjct: 62  33

BLAST of CU142068 vs. TrEMBL
Match: A0A0R0K4P0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G228800 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-06
Identity = 24/32 (75.00%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 28  KKMVAIGLVWGATNVLMRRGALLWDQALKSSS 87
           +KM+A+G+VWGATN +MRRGALLWD+ALKSS+
Sbjct: 2   EKMIAVGIVWGATNAIMRRGALLWDEALKSSA 33

Query: 88  124
           
Sbjct: 62  33

BLAST of CU142068 vs. TrEMBL
Match: A0A0L9VRV3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g084900 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-06
Identity = 24/32 (75.00%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 28  KKMVAIGLVWGATNVLMRRGALLWDQALKSSS 87
           +KM+A+G+VWGATN +MRRGALLWD+ALKSS+
Sbjct: 2   EKMIAVGMVWGATNAIMRRGALLWDEALKSSA 33

Query: 88  124
           
Sbjct: 62  33

BLAST of CU142068 vs. NCBI nr
Match: gi|449465679|ref|XP_004150555.1| (PREDICTED: transmembrane protein 234 homolog [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-08
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = -3

Query: 28  KKMVAIGLVWGATNVLMRRGALLWDQALKSSS 87
           +KMVAIGLVWGATNVLMRRGALLWDQALKSSS
Sbjct: 7   EKMVAIGLVWGATNVLMRRGALLWDQALKSSS 38

Query: 88  124
           
Sbjct: 67  38

BLAST of CU142068 vs. NCBI nr
Match: gi|645274908|ref|XP_008242562.1| (PREDICTED: transmembrane protein 234 homolog [Prunus mume])

HSP 1 Score: 64.7 bits (156), Expect = 5.2e-08
Identity = 28/32 (87.50%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 28  KKMVAIGLVWGATNVLMRRGALLWDQALKSSS 87
           +KM+A+GLVWGATN LMRRGALLWDQALKSSS
Sbjct: 6   EKMIAVGLVWGATNALMRRGALLWDQALKSSS 37

Query: 88  124
           
Sbjct: 66  37

BLAST of CU142068 vs. NCBI nr
Match: gi|595808222|ref|XP_007202735.1| (hypothetical protein PRUPE_ppa013135mg [Prunus persica])

HSP 1 Score: 64.7 bits (156), Expect = 5.2e-08
Identity = 28/32 (87.50%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 28  KKMVAIGLVWGATNVLMRRGALLWDQALKSSS 87
           +KM+A+GLVWGATN LMRRGALLWDQALKSSS
Sbjct: 6   EKMIAVGLVWGATNALMRRGALLWDQALKSSS 37

Query: 88  124
           
Sbjct: 66  37

BLAST of CU142068 vs. NCBI nr
Match: gi|659125569|ref|XP_008462752.1| (PREDICTED: transmembrane protein 234 homolog [Cucumis melo])

HSP 1 Score: 63.9 bits (154), Expect = 8.8e-08
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 28  KKMVAIGLVWGATNVLMRRGALLWDQALKSSS 87
           +KMVAIGLVWGATN LMRRGALLWDQAL+SSS
Sbjct: 16  EKMVAIGLVWGATNALMRRGALLWDQALQSSS 47

Query: 88  124
           
Sbjct: 76  47

BLAST of CU142068 vs. NCBI nr
Match: gi|694322807|ref|XP_009352509.1| (PREDICTED: transmembrane protein 234 homolog [Pyrus x bretschneideri])

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-07
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = -3

Query: 28  KKMVAIGLVWGATNVLMRRGALLWDQALKSSS 87
           +KMV +GLVWGATN LMRRGALLWDQALKSSS
Sbjct: 6   EKMVGVGLVWGATNALMRRGALLWDQALKSSS 37

Query: 88  124
           
Sbjct: 66  37

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LT65_CUCSA2.7e-0896.88Uncharacterized protein OS=Cucumis sativus GN=Csa_1G202290 PE=4 SV=1[more]
M5VRJ9_PRUPE1.4e-0787.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013135mg PE=4 SV=1[more]
A0A0B2SBH4_GLYSO2.0e-0675.00Transmembrane protein 234 like OS=Glycine soja GN=glysoja_036398 PE=4 SV=1[more]
A0A0R0K4P0_SOYBN2.0e-0675.00Uncharacterized protein OS=Glycine max GN=GLYMA_05G228800 PE=4 SV=1[more]
A0A0L9VRV3_PHAAN2.0e-0675.00Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g084900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449465679|ref|XP_004150555.1|1.0e-0896.88PREDICTED: transmembrane protein 234 homolog [Cucumis sativus][more]
gi|645274908|ref|XP_008242562.1|5.2e-0887.50PREDICTED: transmembrane protein 234 homolog [Prunus mume][more]
gi|595808222|ref|XP_007202735.1|5.2e-0887.50hypothetical protein PRUPE_ppa013135mg [Prunus persica][more]
gi|659125569|ref|XP_008462752.1|8.8e-0890.63PREDICTED: transmembrane protein 234 homolog [Cucumis melo][more]
gi|694322807|ref|XP_009352509.1|1.1e-0787.50PREDICTED: transmembrane protein 234 homolog [Pyrus x bretschneideri][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G202290Csa1G202290gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0092288G0092288EST