MELO3C019192 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019192
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	AGAMOUS-like MADS-box transcription factor
Location	chr8 : 14236605 .. 14239109 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGAGGCAGAGTTGAGATCAAGAAGATTGAGAATATCAATAGCAGACAAGTTACTTTCTCTAAACGCCGTAATGGGTTGATGAAAAAGGCCAAAGAATTGTCTGTTCTTTGTGATGCTGAGGTCGCCATTGTTGTCTTCTCCAGTACTGGAAGGCTTTATGAATTCTCCAGCACTAGGTAATTTATTAAATTCTTACACATACTTTTGTTTCATATTTCTTGGTTTTTCTTCTTTTGTTCTCTGCTTTGTTGTCAAATGAAATGGGAGCTTCTATAATAGTATCAACTTTGCTTTGGTGAAAGCTTTTTGCAATGGAAGGGTTTTTGTCCAATTTTTTTTTTGGTCTTTAGTGAGTGTTCTTTTCTCAGTGAACCCACACCAAAGGTAATATTTGGCATTTTACTAGTGGAGACACTTTTTAAAATGTGGGGTTGTCTTCTCTCTCTCCCTCTCTCTTTCTGTCTCTTCACGTTTTCTTGAATTTTTTTTTTTTAACCTATAGGAATGAGAAGCGTAATTTCATTTTCTATAATATATGAATTAAGTTTGGTGTTCTTCACTTTGAAAATAGTAAAGAATAGAATAACTGTCATTATATATATACTTCTCTTTGACAAGGAAAATTGTTAGATCACTCAAAGTTAGTTTTCAATAATTAGTCACTGAAATTAAAGTGTACGCCAAACTTTCATTTGGAAAGGTGCTTAGTTTATTAACTCTGTTTTTCTCTCTATGTTTTGAAGCATGGAACATACACTTTCAAGGTATAGAGGACAGGGCATGGAATTGGATTTTCCTAAAGAGACTTTGGACCACCCAGCACAAGTAAATGCAGTACATTTATGGTCTAAGTTTCTCTTCTTTTTTTTTTTTTCTTTCCGCTCAAAATTCTCTTGAACTTTTCTTTTGGAAAATAGCTGCCACCATCTGATTCTGATGCAAAGTCGTCCGAGGAGGAGATTGAAAAGCTAAAGTTAGCATATACGTAAGTCAATAGTTTTCATATTTGTTTGTCAGCTGTTCTTCTTGAGACACCTCACATAAGTTTCTTGTTCTATTCAAGTTTGCAATAAAAGGAAATGATCTTAAGTCATTAAAAGAACGAGTAATTAGTTGATACACTGAAATAGAGGAGTTGAGTAGAAGTTCAATGTGTTCATTTTACCAATTTATTCTAGAACATGACTTAGAAAGCCTGTTATATGTTTAATAACTTTTGGATTTTTTTTTTTTTTCTTTCTTGTGTAATCTGGATTTTATAGGCAGATGAGAGGCCAGGAACTGGATAGTTTGAGCTTTATAGACCTACAGAACTTAGAAAACCAGTTGCGGGAAGGGATCATATCTATCAAAGACAAGAAGGTACCTTGAGAACTAGAAGTAGAATCTACATGTTCATTTTAGTACTTTGTATGCTTGCTTTGGCTGAGACATTGTTTTTGTAGGAGACATTACTTTTGGAGCAGCTCCAAAGGTGTAGGTCACAGGTAACTTGGTTATCCCTTTTTTAATGTTATTATTTATTCATATGTTTCTTAAAAATTCAAAAAGAAGTTACAATATCTCACTTAAGATTTAGGTTTGGATGTTGAGTTAGTGACTTGTTATTTATAATGATTTTGAAAATGGCTTAAGAAACTATATTGGGGCTGTTTGGGGAGCCGAAATTTAATTAGGATTATTGGAAATCAAATGAGAGTTGAAAATTATGAATAATTAAAAATAAAATGAAAATGAGATCGCGAAACATGAAAACAGTCATAAAGAGGGTTGGATTGAAAATTGTCGGAATGGAATGAGTTTTACAACAAATCAGACCTAAAATGCTCAATCCAATCATGAATTTTGGATTATATTACATTACAAATCCATCCCATCACGTATCACCAACACACTCTGTTACTGTCACTTTGAGAAAATAAGAACTATGGTAGTGATAGATATCGAAGAAATGTTCCTCGATTCTTTGTTACTTTTTCTTATAATTTCATTTTCCTTTCAAACTTTATACTACGTTCTATTCATCTTGTCATCCTCTTTTCATCTTCAGCCATAGGTCTTGAGTTTTGAGTTAGATTTTGTTTGATTTGACCAAAATTGATTGTGGTTGTGTATCATTTTAAATGCAACAAAATGAGAAGACAATTGTAATGTAACCATGTTTGATGCATGGTACGATGGAAAGTAAGTAGATAATGCGATGGATCAAATGGTAGTGGAAAAATTTGTAAGTTTATAGACTGATTGATGAACCGAAATGCTTGTTTCATTAACTTCAAAGTAGGTATTTTATTAGTTTATGTGGAGGCAGGAATCATGAACTTGTATAAACATAATCTCATCAAACCAATTTTCACTCTTGATCTTAGTGGTTGATTATTGATTATTCCCCATCTGATTTCTGTTTACTTTTAGGGGGAAGTAGTCATTTCAGAGAACGAGACTCTGCGAAAACAGGCAAGTTTTCGGCTTCACAAGTGGTTCAACTTAGACTTCTGA

mRNA sequence

ATGGGTAGAGGCAGAGTTGAGATCAAGAAGATTGAGAATATCAATAGCAGACAAGTTACTTTCTCTAAACGCCGTAATGGGTTGATGAAAAAGGCCAAAGAATTGTCTGTTCTTTGTGATGCTGAGGTCGCCATTGTTGTCTTCTCCAGTACTGGAAGGCTTTATGAATTCTCCAGCACTAGGCAGATGAGAGGCCAGGAACTGGATAGTTTGAGCTTTATAGACCTACAGAACTTAGAAAACCAGTTGCGGGAAGGGATCATATCTATCAAAGACAAGAAGGAGACATTACTTTTGGAGCAGCTCCAAAGGTGTAGGTCACAGGGGGAAGTAGTCATTTCAGAGAACGAGACTCTGCGAAAACAGGCAAGTTTTCGGCTTCACAAGTGGTTCAACTTAGACTTCTGA

Coding sequence (CDS)

ATGGGTAGAGGCAGAGTTGAGATCAAGAAGATTGAGAATATCAATAGCAGACAAGTTACTTTCTCTAAACGCCGTAATGGGTTGATGAAAAAGGCCAAAGAATTGTCTGTTCTTTGTGATGCTGAGGTCGCCATTGTTGTCTTCTCCAGTACTGGAAGGCTTTATGAATTCTCCAGCACTAGGCAGATGAGAGGCCAGGAACTGGATAGTTTGAGCTTTATAGACCTACAGAACTTAGAAAACCAGTTGCGGGAAGGGATCATATCTATCAAAGACAAGAAGGAGACATTACTTTTGGAGCAGCTCCAAAGGTGTAGGTCACAGGGGGAAGTAGTCATTTCAGAGAACGAGACTCTGCGAAAACAGGCAAGTTTTCGGCTTCACAAGTGGTTCAACTTAGACTTCTGA

Protein sequence

MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSSTRQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQASFRLHKWFNLDF*

Homology

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BLAST of MELO3C019192 vs. Swiss-Prot
Match: AGL18_ARATH (Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana GN=AGL18 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-23
Identity = 64/127 (50.39%), Postives = 74/127 (58.27%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGR+EIKKIENINSRQVTFSKRRNGL+KKAKELS+LCDAEVA+++FSSTG++Y+FSS 
Sbjct: 1   MGRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSV 60

Query: 61  RQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLR 120
                Q L    +        Q RE               QL  C S G   +  N+   
Sbjct: 61  --CMEQILSRYGYTTASTEHKQQRE--------------HQLLICASHGNEAVLRNDDSM 111

Query: 121 KQASFRL 128
           K    RL
Sbjct: 121 KGELERL 111

HSP 2 Score: 62.8 bits (151), Expect = 3.4e-09
Identity = 29/61 (47.54%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 62  QMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRK 121
           +++G+EL+ +SF DL +LENQL E + S+KD+K  +LL Q++R R Q +  + EN+ LRK
Sbjct: 117 RLKGKELEGMSFPDLISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEENQILRK 176

Query: 122 Q 123
           Q
Sbjct: 177 Q 177

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BLAST of MELO3C019192 vs. Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.3e-21
Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++EIK+IEN NSRQVTFSKRR GL+KKA ELSVLCDAEVA++VFS +G+L+EFSST
Sbjct: 1   MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSST 60

Query: 61  RQ----MRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGE----VV 120
                 +R       S +   N + + +E    +   K+ + + Q +    QG+    + 
Sbjct: 61  SMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLS 120

Query: 121 ISENETLRKQASFRL 128
           + E + L KQ +F L
Sbjct: 121 LKELQHLEKQLNFSL 135

HSP 2 Score: 53.1 bits (126), Expect = 2.7e-06
Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = 1


Query: 63  MRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQ 122
           M+G+ L+ LS  +LQ+LE QL   +IS++++KE LL +QL+  R + +    ENETLR+Q
Sbjct: 111 MQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAELENETLRRQ 170

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BLAST of MELO3C019192 vs. Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 8.6e-21
Identity = 48/60 (80.00%), Postives = 54/60 (90.00%), Query Frame = 1


Query: 1  MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
          MGRG++ I++I+N  SRQVTFSKRRNGL+KKAKELS+LCDAEV +VVFSSTGRLYEFSST
Sbjct: 1  MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60

[Close]

BLAST of MELO3C019192 vs. Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20
Identity = 46/60 (76.67%), Postives = 56/60 (93.33%), Query Frame = 1


Query: 1  MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
          MGRG++EIK+IEN NSRQVTFSKRR+GL+KKA+ELSVLCDAEVA++VFS +G+L+E+SST
Sbjct: 1  MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60

HSP 2 Score: 79.7 bits (195), Expect = 2.7e-14
Identity = 59/167 (35.33%), Postives = 82/167 (49.10%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKK----------------------------- 60
           MGRG++EIK+IEN NSRQVTFSKRR+GL+KK                             
Sbjct: 1   MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60

Query: 61  ----------------AKELSVLCDAEVAIVVFSSTGRLYEFSSTRQMRGQELDSLSFID 120
                           A +    C AEV I+      +L E     Q++G+ L+ L+F +
Sbjct: 61  GMKQTLSRYGNHQSSSASKAEEDC-AEVDILK-DQLSKLQE--KHLQLQGKGLNPLTFKE 120

Query: 121 LQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQ 123
           LQ+LE QL   +I+++++KE LL  QL+  R + +    ENETLR+Q
Sbjct: 121 LQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLRRQ 163

[Close]

BLAST of MELO3C019192 vs. Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-20
Identity = 65/133 (48.87%), Postives = 81/133 (60.90%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEF--- 60
           MGRGRVE+K+IEN  +RQVTF+KRRNGL+KKA ELSVLCDAEVA+++FS+ G+LYEF   
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60

Query: 61  -SSTRQMRGQELDSLSFID--LQNLENQL----REGIISIKDKKETLLLEQLQRC-RSQG 120
            S TR +   +  S    D  +QN EN+L    R   + +K + E L   Q        G
Sbjct: 61  QSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLG 120

Query: 121 EVVISENETLRKQ 123
            + I E E L KQ
Sbjct: 121 TLGIKELEQLEKQ 133

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BLAST of MELO3C019192 vs. TrEMBL
Match: M5W7B7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022973mg PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.4e-40
Identity = 85/122 (69.67%), Postives = 103/122 (84.43%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGR+EIKKIEN+NSRQVTF+KRRNGL+KKAKELSVLCDAEVA++VF+STGRLYEFSST
Sbjct: 1   MGRGRIEIKKIENVNSRQVTFTKRRNGLLKKAKELSVLCDAEVAVIVFASTGRLYEFSST 60

Query: 61  RQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLR 120
           R+M G+EL  LS+ +LQ LE QLREG++ +K KKE +LLE L+  R   +  + ENE LR
Sbjct: 61  RRMMGKELHGLSYKELQQLEEQLREGVLFVKQKKEEILLETLKSSRLLEQRAVEENENLR 120

Query: 121 KQ 123
           KQ
Sbjct: 121 KQ 122

[Close]

BLAST of MELO3C019192 vs. TrEMBL
Match: A0A103XQC9_CYNCS (Transcription factor, K-box OS=Cynara cardunculus var. scolymus GN=Ccrd_002962 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.2e-33
Identity = 72/138 (52.17%), Postives = 108/138 (78.26%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGR+EIKKIEN++SRQVTFSKRR GLMKKAKEL++LCDAEV +++FSSTG+LY F+S+
Sbjct: 39  MGRGRIEIKKIENVSSRQVTFSKRRAGLMKKAKELAILCDAEVGVIIFSSTGKLYGFASS 98

Query: 61  RQMRGQELDSLSFIDLQNLENQLREGIISIKDKK---------ETLLLEQLQRCRSQGEV 120
           R M G+EL+ LS+ +L++LE QL +G++++K++K         +  LLE++++ + + + 
Sbjct: 99  RLMIGKELEGLSYKELEHLERQLHDGMLAVKNRKFLSVPFMTQDMALLEEIEQTKLREQK 158

Query: 121 VISENETLRKQASFRLHK 130
            + ENE L+KQ +  L+K
Sbjct: 159 TMQENEALKKQITEHLNK 176

[Close]

BLAST of MELO3C019192 vs. TrEMBL
Match: A0A103Y1L0_CYNCS (Transcription factor, K-box OS=Cynara cardunculus var. scolymus GN=Ccrd_020976 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 6.4e-31
Identity = 69/120 (57.50%), Postives = 93/120 (77.50%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++EIKKIEN+++RQVTFSKRR GL+KKA EL+VLCDAEV I+VFS+TGRLY+FSS+
Sbjct: 1   MGRGKIEIKKIENVSTRQVTFSKRRAGLLKKAHELAVLCDAEVGIIVFSNTGRLYDFSSS 60

Query: 61  RQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLR 120
           R++ G  L   S  +L  LE +L + +ISIKDKK+ +L E+++R   +   +  ENE LR
Sbjct: 61  RRLMGNNLGGTSVQELHKLEQKLNDSLISIKDKKDAMLFEEIERSNRKERELGYENEVLR 120

[Close]

BLAST of MELO3C019192 vs. TrEMBL
Match: K7M1V3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-30
Identity = 64/119 (53.78%), Postives = 92/119 (77.31%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++ I++I+N  SRQVTFSKRRNGL+KKA+ELS+LCDAEV ++VFSSTG+LY+++ST
Sbjct: 1   MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLMVFSSTGKLYDYAST 60

Query: 61  RQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETL 120
           RQ+ G+EL  L   +LQNLENQL   +  ++ KK+ +L  +++  R +G ++  EN  L
Sbjct: 61  RQLMGEELTGLGIKELQNLENQLEMSLKGVRMKKDQILTNEIKELRQKGNIIHQENVEL 119

[Close]

BLAST of MELO3C019192 vs. TrEMBL
Match: A0A061EXS7_THECC (AGAMOUS-like 18, putative OS=Theobroma cacao GN=TCM_024579 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.0e-29
Identity = 82/170 (48.24%), Postives = 102/170 (60.00%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++EIKKIEN+NSRQVTFSKRRNGL+KKA+ELS+LCDAEV ++VFSSTG++Y++SST
Sbjct: 1   MGRGKIEIKKIENLNSRQVTFSKRRNGLLKKARELSILCDAEVGVIVFSSTGKVYQWSST 60

Query: 61  -------RQMRG-----------QELDSLSFIDLQN------------------------ 120
                  R  RG            E  +L  ID+                          
Sbjct: 61  SMEHILLRYSRGTTEDPSQEHPSDEHKNLQPIDVNTLKEEYLRLRAAYMRLNGKELDGLT 120

Query: 121 ------LENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQ 123
                 LE+QL EGI+S+K +KE +LLEQL+R R Q    I ENETLRKQ
Sbjct: 121 FKELQQLEHQLNEGILSVKQQKEQILLEQLKRSRLQERQAILENETLRKQ 170

[Close]

BLAST of MELO3C019192 vs. TAIR10
Match: AT3G57390.1 (AT3G57390.1 AGAMOUS-like 18)

HSP 1 Score: 109.8 bits (273), Expect = 1.4e-24
Identity = 64/127 (50.39%), Postives = 74/127 (58.27%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGR+EIKKIENINSRQVTFSKRRNGL+KKAKELS+LCDAEVA+++FSSTG++Y+FSS 
Sbjct: 1   MGRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSV 60

Query: 61  RQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLR 120
                Q L    +        Q RE               QL  C S G   +  N+   
Sbjct: 61  --CMEQILSRYGYTTASTEHKQQRE--------------HQLLICASHGNEAVLRNDDSM 111

Query: 121 KQASFRL 128
           K    RL
Sbjct: 121 KGELERL 111

HSP 2 Score: 62.8 bits (151), Expect = 1.9e-10
Identity = 29/61 (47.54%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 62  QMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRK 121
           +++G+EL+ +SF DL +LENQL E + S+KD+K  +LL Q++R R Q +  + EN+ LRK
Sbjct: 117 RLKGKELEGMSFPDLISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEENQILRK 176

Query: 122 Q 123
           Q
Sbjct: 177 Q 177

[Close]

BLAST of MELO3C019192 vs. TAIR10
Match: AT5G13790.1 (AT5G13790.1 AGAMOUS-like 15)

HSP 1 Score: 100.9 bits (250), Expect = 6.3e-22
Identity = 46/60 (76.67%), Postives = 56/60 (93.33%), Query Frame = 1


Query: 1  MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
          MGRG++EIK+IEN NSRQVTFSKRR+GL+KKA+ELSVLCDAEVA++VFS +G+L+E+SST
Sbjct: 1  MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60

HSP 2 Score: 79.7 bits (195), Expect = 1.5e-15
Identity = 59/167 (35.33%), Postives = 82/167 (49.10%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKK----------------------------- 60
           MGRG++EIK+IEN NSRQVTFSKRR+GL+KK                             
Sbjct: 1   MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60

Query: 61  ----------------AKELSVLCDAEVAIVVFSSTGRLYEFSSTRQMRGQELDSLSFID 120
                           A +    C AEV I+      +L E     Q++G+ L+ L+F +
Sbjct: 61  GMKQTLSRYGNHQSSSASKAEEDC-AEVDILK-DQLSKLQE--KHLQLQGKGLNPLTFKE 120

Query: 121 LQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQ 123
           LQ+LE QL   +I+++++KE LL  QL+  R + +    ENETLR+Q
Sbjct: 121 LQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLRRQ 163

[Close]

BLAST of MELO3C019192 vs. TAIR10
Match: AT3G02310.1 (AT3G02310.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.4e-21
Identity = 58/110 (52.73%), Postives = 73/110 (66.36%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVE+K+IEN  +RQVTF+KRRNGL+KKA ELSVLCDAEV+++VFS+ G+LYEF ST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  RQM----RGQELDSLSFIDLQN-----LENQLREGIISIKDKKETLLLEQ 102
             M       +  S   I++ N     LEN  RE  + +K + E L  +Q
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYRE-YLKLKGRYENLQRQQ 109

[Close]

BLAST of MELO3C019192 vs. TAIR10
Match: AT5G15800.2 (AT5G15800.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 98.6 bits (244), Expect = 3.2e-21
Identity = 59/111 (53.15%), Postives = 75/111 (67.57%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVE+K+IEN  +RQVTF+KRRNGL+KKA ELSVLCDAEVA+++FS+ G+LYEF S+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  RQMRGQELD-----SLSFIDLQN-----LENQLREGIISIKDKKETLLLEQ 102
             M  + LD     S   I++ N     LEN  RE  + +K + E L  +Q
Sbjct: 61  SNML-KTLDRYQKCSYGSIEVNNKPAKELENSYRE-YLKLKGRYENLQRQQ 109

[Close]

BLAST of MELO3C019192 vs. TAIR10
Match: AT3G57230.1 (AT3G57230.1 AGAMOUS-like 16)

HSP 1 Score: 97.8 bits (242), Expect = 5.4e-21
Identity = 44/60 (73.33%), Postives = 53/60 (88.33%), Query Frame = 1


Query: 1  MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
          MGRG++ IK+I N  SRQVTFSKRRNGL+KKAKEL++LCDAEV +++FSSTGRLY+FSS+
Sbjct: 1  MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

HSP 2 Score: 53.1 bits (126), Expect = 1.5e-07
Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 1


Query: 61  RQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLR 120
           RQM G+EL  LS   LQNLENQL   +  ++ KK+ +L+E++Q    +G +V  EN  L 
Sbjct: 108 RQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLH 167

Query: 121 KQAS 125
           K+ +
Sbjct: 168 KKVN 171

[Close]

BLAST of MELO3C019192 vs. NCBI nr
Match: gi|595815764|ref|XP_007203959.1| (hypothetical protein PRUPE_ppa022973mg, partial [Prunus persica])

HSP 1 Score: 172.6 bits (436), Expect = 4.9e-40
Identity = 85/122 (69.67%), Postives = 103/122 (84.43%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGR+EIKKIEN+NSRQVTF+KRRNGL+KKAKELSVLCDAEVA++VF+STGRLYEFSST
Sbjct: 1   MGRGRIEIKKIENVNSRQVTFTKRRNGLLKKAKELSVLCDAEVAVIVFASTGRLYEFSST 60

Query: 61  RQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLR 120
           R+M G+EL  LS+ +LQ LE QLREG++ +K KKE +LLE L+  R   +  + ENE LR
Sbjct: 61  RRMMGKELHGLSYKELQQLEEQLREGVLFVKQKKEEILLETLKSSRLLEQRAVEENENLR 120

Query: 121 KQ 123
           KQ
Sbjct: 121 KQ 122

[Close]

BLAST of MELO3C019192 vs. NCBI nr
Match: gi|1000939077|ref|XP_002533438.2| (PREDICTED: agamous-like MADS-box protein AGL18 [Ricinus communis])

HSP 1 Score: 149.8 bits (377), Expect = 3.4e-33
Identity = 85/144 (59.03%), Postives = 99/144 (68.75%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSS---------- 60
           MGRG++EIKKIEN+NSRQVTFSKRRNGL+KKAKELSVLCDAEVA++VFS           
Sbjct: 1   MGRGKIEIKKIENLNSRQVTFSKRRNGLLKKAKELSVLCDAEVAVIVFSGPEHPPGNHGT 60

Query: 61  --------TGRLYEFSSTR----QMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLL 120
                        E S  R    QM GQ+LD LSF DLQNLE+QL +GI+S+KDKKE +L
Sbjct: 61  EHSQSADMRSLKDEVSKLRLICLQMMGQQLDGLSFKDLQNLEHQLSDGILSVKDKKEQVL 120

Query: 121 LEQLQRCRSQGEVVISENETLRKQ 123
           LEQL++ R Q      ENE LRKQ
Sbjct: 121 LEQLKKSRLQERKASQENEALRKQ 144

[Close]

BLAST of MELO3C019192 vs. NCBI nr
Match: gi|976907650|gb|KVH94971.1| (Transcription factor, K-box [Cynara cardunculus var. scolymus])

HSP 1 Score: 148.7 bits (374), Expect = 7.5e-33
Identity = 72/138 (52.17%), Postives = 108/138 (78.26%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGR+EIKKIEN++SRQVTFSKRR GLMKKAKEL++LCDAEV +++FSSTG+LY F+S+
Sbjct: 39  MGRGRIEIKKIENVSSRQVTFSKRRAGLMKKAKELAILCDAEVGVIIFSSTGKLYGFASS 98

Query: 61  RQMRGQELDSLSFIDLQNLENQLREGIISIKDKK---------ETLLLEQLQRCRSQGEV 120
           R M G+EL+ LS+ +L++LE QL +G++++K++K         +  LLE++++ + + + 
Sbjct: 99  RLMIGKELEGLSYKELEHLERQLHDGMLAVKNRKFLSVPFMTQDMALLEEIEQTKLREQK 158

Query: 121 VISENETLRKQASFRLHK 130
            + ENE L+KQ +  L+K
Sbjct: 159 TMQENEALKKQITEHLNK 176

[Close]

BLAST of MELO3C019192 vs. NCBI nr
Match: gi|1009137441|ref|XP_015886055.1| (PREDICTED: agamous-like MADS-box protein AGL16 isoform X3 [Ziziphus jujuba])

HSP 1 Score: 148.3 bits (373), Expect = 9.8e-33
Identity = 69/122 (56.56%), Postives = 97/122 (79.51%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++ I++I+N  SRQVTFSKRRNGL+KKAKEL++LCDAEV +++F+ TG+LY+FSST
Sbjct: 7   MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFTGTGKLYDFSST 66

Query: 61  RQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLR 120
           RQM G+EL SLS  DLQNLENQL   +  ++ KK+ +LL+++Q    +G+++  EN  L 
Sbjct: 67  RQMMGEELSSLSVKDLQNLENQLEMSLRGVRMKKDQILLDEIQELNRKGDLIHQENVELY 126

Query: 121 KQ 123
           K+
Sbjct: 127 KK 128

[Close]

BLAST of MELO3C019192 vs. NCBI nr
Match: gi|731311800|ref|XP_010671142.1| (PREDICTED: MADS-box transcription factor 27-like isoform X4 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-31
Identity = 66/124 (53.23%), Postives = 95/124 (76.61%), Query Frame = 1


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++ I++I+N  SRQVTFSKRRNGL+KKAKEL +LCDA+V +++FSSTG+LYEF+S 
Sbjct: 1   MGRGKIVIRRIDNTTSRQVTFSKRRNGLLKKAKELGILCDAQVGVIIFSSTGKLYEFASN 60

Query: 61  RQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLR 120
           RQ+ G+EL  L+  DLQNLE+QL   +  ++ KK+ LL+ ++Q    + E++  EN  L 
Sbjct: 61  RQIMGEELSGLTVKDLQNLESQLEMSLRGVRTKKDQLLISEIQELNQKREIIHQENVELY 120

Query: 121 KQAS 125
           K+A+
Sbjct: 121 KKAN 124

The following BLAST results are available for this feature:

BLAST of MELO3C019192 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGL18_ARATH	2.4e-23	50.39	Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana GN=AGL18 PE=2 SV=1	[more]
AGL15_BRANA	2.3e-21	45.19	Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1	[more]
MAD57_ORYSJ	8.6e-21	80.00	MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 ...	[more]
AGL15_ARATH	1.1e-20	76.67	Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1	[more]
MADS8_ORYSJ	1.5e-20	48.87	MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV...	[more]

BLAST of MELO3C019192 vs. TrEMBL


Match Name	E-value	Identity	Description
M5W7B7_PRUPE	3.4e-40	69.67	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022973mg PE=4 S...	[more]
A0A103XQC9_CYNCS	5.2e-33	52.17	Transcription factor, K-box OS=Cynara cardunculus var. scolymus GN=Ccrd_002962 P...	[more]
A0A103Y1L0_CYNCS	6.4e-31	57.50	Transcription factor, K-box OS=Cynara cardunculus var. scolymus GN=Ccrd_020976 P...	[more]
K7M1V3_SOYBN	4.2e-30	53.78	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A0A061EXS7_THECC	6.0e-29	48.24	AGAMOUS-like 18, putative OS=Theobroma cacao GN=TCM_024579 PE=4 SV=1	[more]

BLAST of MELO3C019192 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57390.1	1.4e-24	50.39	AGAMOUS-like 18	[more]
AT5G13790.1	6.3e-22	76.67	AGAMOUS-like 15	[more]
AT3G02310.1	2.4e-21	52.73	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	3.2e-21	53.15	K-box region and MADS-box transcription factor family protein	[more]
AT3G57230.1	5.4e-21	73.33	AGAMOUS-like 16	[more]

BLAST of MELO3C019192 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|595815764\|ref\|XP_007203959.1\|	4.9e-40	69.67	hypothetical protein PRUPE_ppa022973mg, partial [Prunus persica]	[more]
gi\|1000939077\|ref\|XP_002533438.2\|	3.4e-33	59.03	PREDICTED: agamous-like MADS-box protein AGL18 [Ricinus communis]	[more]
gi\|976907650\|gb\|KVH94971.1\|	7.5e-33	52.17	Transcription factor, K-box [Cynara cardunculus var. scolymus]	[more]
gi\|1009137441\|ref\|XP_015886055.1\|	9.8e-33	56.56	PREDICTED: agamous-like MADS-box protein AGL16 isoform X3 [Ziziphus jujuba]	[more]
gi\|731311800\|ref\|XP_010671142.1\|	4.1e-31	53.23	PREDICTED: MADS-box transcription factor 27-like isoform X4 [Beta vulgaris subsp...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002100	TF_MADSbox
IPR002487	TF_Kbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0046983	protein dimerization activity
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0048608	reproductive structure development
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019192T1	MELO3C019192T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 7.2E-30coord: 23..38 score: 7.2E-30coord: 38..59 score: 7.2
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 score: 2.8
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 score: 5.4
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57 scor
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 1..61 score: 3
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 2..64 score: 4.32
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 59..122 score: 1.2
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 39..131 score: 7
None	No IPR available	unknown	Coil	Coil	coord: 76..96 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..122 score: 7.5
None	No IPR available	PANTHER	PTHR11945:SF175	AGAMOUS-LIKE MADS-BOX PROTEIN AGL18	coord: 2..122 score: 7.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C019192	Csa4G410880	Cucumber (Chinese Long) v2	cumeB272
MELO3C019192	Cla006862	Watermelon (97103) v1	mewmB580
MELO3C019192	ClCG04G003520	Watermelon (Charleston Gray)	mewcgB534
MELO3C019192	Cla97C04G070570	Watermelon (97103) v2	mewmbB544
MELO3C019192	CSPI04G18510	Wild cucumber (PI 183967)	cpimeB331
MELO3C019192	Cucsa.268980	Cucumber (Gy14) v1	cgymeB449
MELO3C019192	CmaCh03G000530	Cucurbita maxima (Rimu)	cmameB613
MELO3C019192	CmoCh03G000540	Cucurbita moschata (Rifu)	cmomeB601
MELO3C019192	CsGy4G017600	Cucumber (Gy14) v2	cgybmeB286
MELO3C019192	CsaV3_4G028880	Cucumber (Chinese Long) v3	cucmeB337

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019192	Cucurbita maxima (Rimu)	cmameB810
MELO3C019192	Cucurbita moschata (Rifu)	cmomeB794
MELO3C019192	Cucurbita pepo (Zucchini)	cpemeB451