Cucsa.268980 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.268980
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Agamous-like MADS-box AGL15-like protein
Location	scaffold02444 : 148814 .. 151656 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTAGATTTTCCTAAAGAGACTTTGGACCACCCAGCACAAGTAAATGCAGTACATTTATGGTCTAAGTTTCTTTCTCTTATTTTTTTTATTTATTTTCTGCTCAAAATTCTGTTGAATTTTTCTTCTGGAAAATAGCTGCCACCATCTGATTCTGATGCAAAGTCGTCCGAGGAGGAGATTGGAAAGCTAAAGTTAGCATATACGTAAGTCAAAAGTTTTCATATTTGTTTGTCAGCTGTTCTTCTTGAGACACCTCACATAAGTTTCTTGTTCTATTCATATTTGCAATAAAAGGAAGTGATCTCAAGTCATTAAAAGAACGAGTAATTAATTGCGAGTAATTAGTTGATACACTGAAATAGAAGAGTTGAGTAGAAGTTCTGTGTTCATTTTACCAATTATTCTAGAACATGACTTAGAAATCCTGTTATATGGTTAATAACTCTTAGTTTCTTTTTTCTTTGTGTAATCTGGATTTTATAGGCAGATGAGAGGCCAGGAACTGGATAGTTTGAGCTTTATAGACCTACAGAACTTAGAAAACCAGTTGCGGGAAGGGATCATATCTATCAAAGACAAGAAGGTGCCTTGAGAAATAGAATCTACATGTTCATTTTAGTACTTGTATGCTTGCGTTGGCTGAGACATTGTTTTTGTTTTTGTAGGAGACACTACTTTTGGAACAGCTCCAAAGGTGTAGGTCACAGGTAACTTGGTTATCCCTTTCTTTTAATGTTATTATTTATTCATATGTTTTTTAAAATTCAAAGAAGTTACAATCTCACTTAAGATTTAGTTTTGGATGTTGAGTTGGTGACTTATTATTTATAACAATTTTGAAAATGGCGTAAGGAACTATATTAGGGGCTGTTTGGAAAGCCGAAATGTAATTAGGATTACTGGAAATCAGATGAGAGTTGAAAAATGTGAGTAATAAAAAATTAAACGAAAATAAGATCGTGAAGTGAAAACACTCAAAAAGATGGTTGGATTGAAAACTATTAGAATGAAATGAGTTTTATAACAAATTGGACCTAGAACGCTCAATCCAAACATGAATTTTAGACTATATTACATTACAAATTCATCCCATCACGGATCACCAAAACACCCCCTTACAGTCACTCTGAGAAAATAAGAACTATGTTAGTGATACATATTGAAGAAATGTTCCTCGATTCTTTGTTAAATTTTCTTATAATTTCATTTTCCTTTCAAACTTTATACTACGTTCTATTCATCTTGTCATCCTATTTTCATCTTCAGCCATAGGTCTTGAGTCCAGTTAGATTTTGTTTGATTTGACCAAAATTGATTCTGGTTGTGTATCATTTTAAATGCAACAAAATGAGAAGACAATTGTTATGTAACCAAGTTTGATGCATGGTACGATGGAAAGTAAGTAGATAATGCGATGGATGAAATGGTAGTGGAAAAATTTGTAAGTTTATAGACTGATGGATGAACAGAAATGCTTGTTTCATTACACTTCAAAATAGGTCTTTTATTAGTTTATGTGGAGGCAGGAATCATGAACTTGTATAAACATAATCTCATGAAACCAACTTCCACTCTTGATCTTAGTGGTTGATTATTGATTATTTCCCATCTGATTTCTGTTTACCTTTAGGGGGAAGTAGTCATTTCAGAGAATGAAACCCTGCGAAAACAGGCAAGTTTTCGGCTTCATGAGTGATTCAACTTAGACTTCTGATATTGAAAGAATTGACCATAAAAATTTTTATACTTTTCTTCCTTTTAATAATTTATAGCTCGAGGAGTTTCAGCACAGAAATAATATAACACTTCAGGAGTCTAGTCCCCTTCAGAGATCCTACTTTTCGGATTCGAAAACTGCTTCTACCAATGAGACCGAGGTCAAGACGGAGGTAGAGGAAAATGACCGCTCAGAAATTTCCTTGCATCTGGGGTAAACTTTAAATTTCTTAGTCAAGTCTCTAGAATTTTTTTTACTAGTACAATTTTGATTGTGGGTTGGAAGATTGAACTTTCTATCTCTAGGGATGGAAGTCATTATGATTCCGCTGATTCCAACTCACTTTGGTAATGATTTGCTTTCTTAAAAAACGTTGCAATCTTTTTCAAATTTAAAAAACAAAAATTAGGCTTTCATGTTTGAAATTGATTAATGATTCCTTGTAACACTCTTGAGAGTATCCTTCACATAAAGAAAATAAGGTTTAAAAAGCAATGATTTAGTCCTGACTTAACTTATGTACACTCAGAAAAGATAAGAAAAATTAACTTATGCATGATTGATTTAGTGCTTACTAGGTAGTACATTAATATTTTGATGGAGGTTTGAACTTGTGTAGTTAAATAAACCGAACTAGTTAGGGATCAACACATTAAAGAATAATGCATTACATAGTAAATTTTGCAATGCTTCACCTTTGTGAAATTTTTCTTAGTTGCACTAAATTGTCTCAAAATTTAAATTAGTTACTAAAGTTCATAGACTAAATTTAAAATTATAAAGATGTATTTTTGATACTAATATTTAAGGATTAAATTGTTTTCTTCCATGATAAAACTTTTTCATCAAAATATGAAACCGTGTGACCTCATACATGAGCTATGACATCTAATTTTTTTGTTTTGCCCTTGCTCAATTCATTTAAGTATGACTAACGGACCAATGTGATCTGAGTTAAGTAACAAAATCCAAAATTTTCATTAGGTTGTCATTGGATGGTCAACGAAAAAGGAAACGATCGGTTGAAGGTGCGAGCACTGACACAACCTGTAGTCAAGTAGAGTTGGAAGGGGATGCACTATTAGCAAATGACGAACTCTCTCGTCATTTTGGTATGTAA

mRNA sequence

ATGGAATTAGATTTTCCTAAAGAGACTTTGGACCACCCAGCACAACTGCCACCATCTGATTCTGATGCAAAGTCGTCCGAGGAGGAGATTGGAAAGCTAAAGTTAGCATATACGCAGATGAGAGGCCAGGAACTGGATAGTTTGAGCTTTATAGACCTACAGAACTTAGAAAACCAGTTGCGGGAAGGGATCATATCTATCAAAGACAAGAAGGAGACACTACTTTTGGAACAGCTCCAAAGGTGTAGGTCACAGGGGGAAGTAGTCATTTCAGAGAATGAAACCCTGCGAAAACAGCTCGAGGAGTTTCAGCACAGAAATAATATAACACTTCAGGAGTCTAGTCCCCTTCAGAGATCCTACTTTTCGGATTCGAAAACTGCTTCTACCAATGAGACCGAGGTCAAGACGGAGGTAGAGGAAAATGACCGCTCAGAAATTTCCTTGCATCTGGGGTTGTCATTGGATGGTCAACGAAAAAGGAAACGATCGGTTGAAGGTGCGAGCACTGACACAACCTGTAGTCAAGTAGAGTTGGAAGGGGATGCACTATTAGCAAATGACGAACTCTCTCGTCATTTTGGTATGTAA

Coding sequence (CDS)

ATGGAATTAGATTTTCCTAAAGAGACTTTGGACCACCCAGCACAACTGCCACCATCTGATTCTGATGCAAAGTCGTCCGAGGAGGAGATTGGAAAGCTAAAGTTAGCATATACGCAGATGAGAGGCCAGGAACTGGATAGTTTGAGCTTTATAGACCTACAGAACTTAGAAAACCAGTTGCGGGAAGGGATCATATCTATCAAAGACAAGAAGGAGACACTACTTTTGGAACAGCTCCAAAGGTGTAGGTCACAGGGGGAAGTAGTCATTTCAGAGAATGAAACCCTGCGAAAACAGCTCGAGGAGTTTCAGCACAGAAATAATATAACACTTCAGGAGTCTAGTCCCCTTCAGAGATCCTACTTTTCGGATTCGAAAACTGCTTCTACCAATGAGACCGAGGTCAAGACGGAGGTAGAGGAAAATGACCGCTCAGAAATTTCCTTGCATCTGGGGTTGTCATTGGATGGTCAACGAAAAAGGAAACGATCGGTTGAAGGTGCGAGCACTGACACAACCTGTAGTCAAGTAGAGTTGGAAGGGGATGCACTATTAGCAAATGACGAACTCTCTCGTCATTTTGGTATGTAA

Protein sequence

MELDFPKETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRSYFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSQVELEGDALLANDELSRHFGM*

Homology

[Close]

BLAST of Cucsa.268980 vs. Swiss-Prot
Match: AGL18_ARATH (Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana GN=AGL18 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-17
Identity = 57/154 (37.01%), Postives = 88/154 (57.14%), Query Frame = 1


Query: 25  SSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRS 84
           S + E+ +L+LA  +++G+EL+ +SF DL +LENQL E + S+KD+K  +LL Q++R R 
Sbjct: 103 SMKGELERLQLAIERLKGKELEGMSFPDLISLENQLNESLHSVKDQKTQILLNQIERSRI 162

Query: 85  QGEVVISENETLRKQLEEFQHRNNITLQESSPLQRSYFSDSKTASTNETEVKTEVEENDR 144
           Q +  + EN+ LRKQ+E     +   +    P   S  +D +++S+ E E      E   
Sbjct: 163 QEKKALEENQILRKQVEMLGRGSGPKVLNERPQDSSPEADPESSSSEEDE---NDNEEHH 222

Query: 145 SEISLHLGLSLDGQ-RKRKRSVEGASTDTTCSQV 178
           S+ SL LGLS  G   KRK+       D + SQV
Sbjct: 223 SDTSLQLGLSSTGYCTKRKKPKIELVCDNSGSQV 253

[Close]

BLAST of Cucsa.268980 vs. Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-10
Identity = 48/152 (31.58%), Postives = 84/152 (55.26%), Query Frame = 1


Query: 27  EEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQG 86
           ++EI  L+  +  M+G+ L+ LS  +LQ+LE QL   +IS++++KE LL +QL+  R + 
Sbjct: 98  KDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKE 157

Query: 87  EVVISENETLRKQLEEFQHRNNITLQESSPLQ-RSYFSDSKTASTNET---EVKTEVEEN 146
           +    ENETLR+Q++E +       Q  +P   R +  D K +  + T   ++   + +N
Sbjct: 158 QRAELENETLRRQVQELRSFLPSINQHYAPSYIRCFAIDPKNSLLSNTCLGDINCSL-QN 217

Query: 147 DRSEISLHLGLSLDGQ--RKRKRSVEGASTDT 173
             S+ +L LGL  +    RK +   E  S+D+
Sbjct: 218 TNSDTTLQLGLPGEAHDTRKNEGDRESPSSDS 248

[Close]

BLAST of Cucsa.268980 vs. Swiss-Prot
Match: AGL16_ARATH (Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana GN=AGL16 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-08
Identity = 41/134 (30.60%), Postives = 71/134 (52.99%), Query Frame = 1


Query: 22  DAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQR 81
           +A   + ++  L+  + QM G+EL  LS   LQNLENQL   +  ++ KK+ +L+E++Q 
Sbjct: 92  EAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQV 151

Query: 82  CRSQGEVVISENETLRKQLEEFQHRNNITLQES-SPLQRSYFSDSKTASTNETEVKTEVE 141
              +G +V  EN  L K++    H+ N+ L E  S ++    ++  +  TN  +++    
Sbjct: 152 LNREGNLVHQENLDLHKKV-NLMHQQNMELHEKVSEVEGVKIANKNSLLTNGLDMR---- 211

Query: 142 ENDRSEISLHLGLS 155
             D S   +HL LS
Sbjct: 212 --DTSNEHVHLQLS 218

[Close]

BLAST of Cucsa.268980 vs. Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.2e-08
Identity = 45/174 (25.86%), Postives = 87/174 (50.00%), Query Frame = 1


Query: 8   ETLDHPA---QLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGI 67
           E LD P+   QL  + + ++ S+E I +      QMRG+EL  L+  +LQ LE  L  G+
Sbjct: 77  EKLDQPSLELQLVENSNYSRLSKE-ISEKSHRLRQMRGEELQGLNIEELQQLERSLETGL 136

Query: 68  ISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNN-----------ITLQE 127
             + ++K   ++ ++ + + +G  ++ ENE LR+Q+ E  + NN           +  + 
Sbjct: 137 SRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVMEISNNNNNNNNGYREAGVVIFEP 196

Query: 128 SSPLQRSYFSDSKTAS--TNE-TEVKTEVEENDRSEISLHLGLSLDGQRKRKRS 165
            +    +   D +++   TN    +    +++D S+ SL LGL+   + KR ++
Sbjct: 197 ENGFNNNNNEDGQSSESVTNPCNSIDPPPQDDDSSDTSLKLGLATLLRLKRSKA 249

[Close]

BLAST of Cucsa.268980 vs. Swiss-Prot
Match: AGL24_ARATH (MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.4e-08
Identity = 36/131 (27.48%), Postives = 69/131 (52.67%), Query Frame = 1


Query: 23  AKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRC 82
           +K  E++  +L+    ++RG++LD L+  +LQ LE  L  G+  + +KK   ++ Q+   
Sbjct: 98  SKEVEDKTKQLR----KLRGEDLDGLNLEELQRLEKLLESGLSRVSEKKGECVMSQIFSL 157

Query: 83  RSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRSYFSDSKTASTNETEVKTEVEEN 142
             +G  ++ EN+ LR +LE  +     TL+E+         ++++ +TN +   +     
Sbjct: 158 EKRGSELVDENKRLRDKLETLERAKLTTLKEA--------LETESVTTNVSSYDSGTPLE 216

Query: 143 DRSEISLHLGL 154
           D S+ SL LGL
Sbjct: 218 DDSDTSLKLGL 216

[Close]

BLAST of Cucsa.268980 vs. TrEMBL
Match: A0A0A0KYB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G410880 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 4.1e-103
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1


Query: 1   MELDFPKETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQL 60
           MELDFPKETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQL
Sbjct: 13  MELDFPKETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQL 72

Query: 61  REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRS 120
           REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRS
Sbjct: 73  REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRS 132

Query: 121 YFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSQVELE 180
           YFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSQVELE
Sbjct: 133 YFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSQVELE 192

Query: 181 GDALLANDELSRHFGM 197
           GDALLANDELSRHFGM
Sbjct: 193 GDALLANDELSRHFGM 208

[Close]

BLAST of Cucsa.268980 vs. TrEMBL
Match: A0A061EXS7_THECC (AGAMOUS-like 18, putative OS=Theobroma cacao GN=TCM_024579 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.7e-27
Identity = 82/187 (43.85%), Postives = 109/187 (58.29%), Query Frame = 1


Query: 3   LDFPKETLDHPAQLPPSDS-------DAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQN 62
           L + + T + P+Q  PSD        D  + +EE  +L+ AY ++ G+ELD L+F +LQ 
Sbjct: 67  LRYSRGTTEDPSQEHPSDEHKNLQPIDVNTLKEEYLRLRAAYMRLNGKELDGLTFKELQQ 126

Query: 63  LENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESS 122
           LE+QL EGI+S+K +KE +LLEQL+R R Q    I ENETLRKQ+ E Q   +  L E +
Sbjct: 127 LEHQLNEGILSVKQQKEQILLEQLKRSRLQERQAILENETLRKQIVELQQNTSSNLLEYN 186

Query: 123 PLQR-SYFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRK-RSVEGASTDTT 181
           PLQR S +S          E     + ND S+ SLHLGL  D  RKRK   +E  S +TT
Sbjct: 187 PLQRVSPYSSKAEYDCASEEEDDHADNNDHSDTSLHLGLPSDVGRKRKVAKIEPVSNETT 246

[Close]

BLAST of Cucsa.268980 vs. TrEMBL
Match: V7BLX2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G251600g PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-25
Identity = 73/170 (42.94%), Postives = 100/170 (58.82%), Query Frame = 1


Query: 8   ETLDHPAQLPPSD-----SDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLRE 67
           ++ + P  +PP D      D    ++EI KL+ AY  M G+ELD LS  +LQ+LENQL E
Sbjct: 76  DSAEQPIDVPPKDVMVMEPDTNLLKDEITKLRSAYLNMMGKELDGLSLKELQHLENQLSE 135

Query: 68  GIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRSYF 127
           GI+++K+KKE +L+EQL+R R Q +  + ENE LRKQLEE Q++      E S L RS+ 
Sbjct: 136 GILAVKEKKEQVLVEQLRRSRIQEQKAVLENEVLRKQLEEIQNKTKTQFLEFSSLDRSFS 195

Query: 128 SDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDT 173
            +S  +  N        EEND S+ SL L LS D  R+RK     A  D+
Sbjct: 196 KNSSKSLFN-----CASEENDHSDTSLQLALSTDYGRQRKELKIEACNDS 240

[Close]

BLAST of Cucsa.268980 vs. TrEMBL
Match: A0A067DSV8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039982mg PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.9e-25
Identity = 70/160 (43.75%), Postives = 104/160 (65.00%), Query Frame = 1


Query: 15  QLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETL 74
           +LPP  ++  + ++E  +L+LAY +M GQELD LSF +LQ LE+QL EG++S+KD KE +
Sbjct: 89  ELPPKSAELNALKDEYARLRLAYMRMNGQELDGLSFKELQQLEHQLSEGMLSVKDMKEQV 148

Query: 75  LLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNIT-LQESSPLQRSYFSDSKTASTNET 134
           LLEQ++R R   +  + ENETLRKQ+EE +  ++ + L E  PL+R  FS +K    +  
Sbjct: 149 LLEQIRRSRLMEQKAMLENETLRKQMEELRRSSSRSPLVEFDPLERR-FSFTK-LKADHC 208

Query: 135 EVKTEVEENDRSEISLHLGLSLDGQRKRKR-SVEGASTDT 173
              +   E+D S+ SLHLGLS + +RKRK   +E    D+
Sbjct: 209 GCTSNENEDDHSDTSLHLGLSSEVRRKRKAPKIESTGNDS 246

[Close]

BLAST of Cucsa.268980 vs. TrEMBL
Match: V4SC55_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005698mg PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.9e-25
Identity = 70/160 (43.75%), Postives = 104/160 (65.00%), Query Frame = 1


Query: 15  QLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETL 74
           +LPP  ++  + ++E  +L+LAY +M GQELD LSF +LQ LE+QL EG++S+KD KE +
Sbjct: 89  ELPPKSAELNALKDEYARLRLAYMRMNGQELDGLSFKELQQLEHQLSEGMLSVKDMKEQV 148

Query: 75  LLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNIT-LQESSPLQRSYFSDSKTASTNET 134
           LLEQ++R R   +  + ENETLRKQ+EE +  ++ + L E  PL+R  FS +K    +  
Sbjct: 149 LLEQIRRSRLMEQKAMLENETLRKQMEELRRSSSRSPLVEFDPLERR-FSFTK-LKADHC 208

Query: 135 EVKTEVEENDRSEISLHLGLSLDGQRKRKR-SVEGASTDT 173
              +   E+D S+ SLHLGLS + +RKRK   +E    D+
Sbjct: 209 GCTSNENEDDHSDTSLHLGLSSEVRRKRKAPKIESTGNDS 246

[Close]

BLAST of Cucsa.268980 vs. TAIR10
Match: AT3G57390.1 (AT3G57390.1 AGAMOUS-like 18)

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-18
Identity = 57/154 (37.01%), Postives = 88/154 (57.14%), Query Frame = 1


Query: 25  SSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRS 84
           S + E+ +L+LA  +++G+EL+ +SF DL +LENQL E + S+KD+K  +LL Q++R R 
Sbjct: 103 SMKGELERLQLAIERLKGKELEGMSFPDLISLENQLNESLHSVKDQKTQILLNQIERSRI 162

Query: 85  QGEVVISENETLRKQLEEFQHRNNITLQESSPLQRSYFSDSKTASTNETEVKTEVEENDR 144
           Q +  + EN+ LRKQ+E     +   +    P   S  +D +++S+ E E      E   
Sbjct: 163 QEKKALEENQILRKQVEMLGRGSGPKVLNERPQDSSPEADPESSSSEEDE---NDNEEHH 222

Query: 145 SEISLHLGLSLDGQ-RKRKRSVEGASTDTTCSQV 178
           S+ SL LGLS  G   KRK+       D + SQV
Sbjct: 223 SDTSLQLGLSSTGYCTKRKKPKIELVCDNSGSQV 253

[Close]

BLAST of Cucsa.268980 vs. TAIR10
Match: AT3G57230.1 (AT3G57230.1 AGAMOUS-like 16)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 41/134 (30.60%), Postives = 71/134 (52.99%), Query Frame = 1


Query: 22  DAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQR 81
           +A   + ++  L+  + QM G+EL  LS   LQNLENQL   +  ++ KK+ +L+E++Q 
Sbjct: 92  EAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQV 151

Query: 82  CRSQGEVVISENETLRKQLEEFQHRNNITLQES-SPLQRSYFSDSKTASTNETEVKTEVE 141
              +G +V  EN  L K++    H+ N+ L E  S ++    ++  +  TN  +++    
Sbjct: 152 LNREGNLVHQENLDLHKKV-NLMHQQNMELHEKVSEVEGVKIANKNSLLTNGLDMR---- 211

Query: 142 ENDRSEISLHLGLS 155
             D S   +HL LS
Sbjct: 212 --DTSNEHVHLQLS 218

[Close]

BLAST of Cucsa.268980 vs. TAIR10
Match: AT4G24540.1 (AT4G24540.1 AGAMOUS-like 24)

HSP 1 Score: 59.3 bits (142), Expect = 3.1e-09
Identity = 36/131 (27.48%), Postives = 69/131 (52.67%), Query Frame = 1


Query: 23  AKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGIISIKDKKETLLLEQLQRC 82
           +K  E++  +L+    ++RG++LD L+  +LQ LE  L  G+  + +KK   ++ Q+   
Sbjct: 98  SKEVEDKTKQLR----KLRGEDLDGLNLEELQRLEKLLESGLSRVSEKKGECVMSQIFSL 157

Query: 83  RSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRSYFSDSKTASTNETEVKTEVEEN 142
             +G  ++ EN+ LR +LE  +     TL+E+         ++++ +TN +   +     
Sbjct: 158 EKRGSELVDENKRLRDKLETLERAKLTTLKEA--------LETESVTTNVSSYDSGTPLE 216

Query: 143 DRSEISLHLGL 154
           D S+ SL LGL
Sbjct: 218 DDSDTSLKLGL 216

[Close]

BLAST of Cucsa.268980 vs. TAIR10
Match: AT2G22540.1 (AT2G22540.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.8e-08
Identity = 52/168 (30.95%), Postives = 74/168 (44.05%), Query Frame = 1


Query: 8   ETLDHPA---QLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGI 67
           E LD P+   QL  +   A+ S+E I        QMRG+EL  L   +LQ LE  L  G+
Sbjct: 77  EKLDQPSLELQLVENSDHARMSKE-IADKSHRLRQMRGEELQGLDIEELQQLEKALETGL 136

Query: 68  --------------ISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNIT 127
                         IS   KK   L+++ +R R QG  +  ENE L  Q+    H +   
Sbjct: 137 TRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENERLGMQICNNVHAHGGA 196

Query: 128 LQESSPL-QRSYFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDG 158
             E++ + +    S+S T + N T    + E +D    SL LGL   G
Sbjct: 197 ESENAAVYEEGQSSESITNAGNSTGAPVDSESSD---TSLRLGLPYGG 240

[Close]

BLAST of Cucsa.268980 vs. TAIR10
Match: AT2G14210.1 (AT2G14210.1 AGAMOUS-like 44)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-07
Identity = 26/106 (24.53%), Postives = 61/106 (57.55%), Query Frame = 1


Query: 8   ETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLREGIISI 67
           + L+H +++     +  S ++++  L+  + ++ G+EL  ++  DLQNLE+QL   +  +
Sbjct: 79  QLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMNANDLQNLEDQLVTSLKGV 138

Query: 68  KDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQE 114
           + KK+ L+  +++    +G+++  EN  L + + +   + NI LQ+
Sbjct: 139 RLKKDQLMTNEIRELNRKGQIIQKENHEL-QNIVDIMRKENIKLQK 183

[Close]

BLAST of Cucsa.268980 vs. NCBI nr
Match: gi|778694571|ref|XP_004150520.2| (PREDICTED: MADS-box transcription factor 23-like [Cucumis sativus])

HSP 1 Score: 382.1 bits (980), Expect = 5.9e-103
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1


Query: 1   MELDFPKETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQL 60
           MELDFPKETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQL
Sbjct: 91  MELDFPKETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQL 150

Query: 61  REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRS 120
           REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRS
Sbjct: 151 REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRS 210

Query: 121 YFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSQVELE 180
           YFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSQVELE
Sbjct: 211 YFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSQVELE 270

Query: 181 GDALLANDELSRHFGM 197
           GDALLANDELSRHFGM
Sbjct: 271 GDALLANDELSRHFGM 286

[Close]

BLAST of Cucsa.268980 vs. NCBI nr
Match: gi|700199477|gb|KGN54635.1| (hypothetical protein Csa_4G410880 [Cucumis sativus])

HSP 1 Score: 382.1 bits (980), Expect = 5.9e-103
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1


Query: 1   MELDFPKETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQL 60
           MELDFPKETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQL
Sbjct: 13  MELDFPKETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQL 72

Query: 61  REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRS 120
           REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRS
Sbjct: 73  REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRS 132

Query: 121 YFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSQVELE 180
           YFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSQVELE
Sbjct: 133 YFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSQVELE 192

Query: 181 GDALLANDELSRHFGM 197
           GDALLANDELSRHFGM
Sbjct: 193 GDALLANDELSRHFGM 208

[Close]

BLAST of Cucsa.268980 vs. NCBI nr
Match: gi|659111559|ref|XP_008455789.1| (PREDICTED: MADS-box transcription factor 23-like [Cucumis melo])

HSP 1 Score: 368.6 bits (945), Expect = 6.7e-99
Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 1


Query: 1   MELDFPKETLDHPAQLPPSDSDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQL 60
           MELDFPKETLDHPAQLPPSDSDAKSSEEEI KLKLAYTQMRGQELDSLSFIDLQNLENQL
Sbjct: 91  MELDFPKETLDHPAQLPPSDSDAKSSEEEIEKLKLAYTQMRGQELDSLSFIDLQNLENQL 150

Query: 61  REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRS 120
           REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQ RNNI  QESSPLQRS
Sbjct: 151 REGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQQRNNIPRQESSPLQRS 210

Query: 121 YFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSQVELE 180
           YFSDSKTASTNETEVKTE EENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCS+VELE
Sbjct: 211 YFSDSKTASTNETEVKTEAEENDRSEISLHLGLSLDGQRKRKRSVEGASTDTTCSEVELE 270

Query: 181 GDALLANDELSRHFGM 197
           GDALLANDELSRHFGM
Sbjct: 271 GDALLANDELSRHFGM 286

[Close]

BLAST of Cucsa.268980 vs. NCBI nr
Match: gi|590635650|ref|XP_007028680.1| (AGAMOUS-like 18, putative [Theobroma cacao])

HSP 1 Score: 129.8 bits (325), Expect = 5.2e-27
Identity = 82/187 (43.85%), Postives = 109/187 (58.29%), Query Frame = 1


Query: 3   LDFPKETLDHPAQLPPSDS-------DAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQN 62
           L + + T + P+Q  PSD        D  + +EE  +L+ AY ++ G+ELD L+F +LQ 
Sbjct: 67  LRYSRGTTEDPSQEHPSDEHKNLQPIDVNTLKEEYLRLRAAYMRLNGKELDGLTFKELQQ 126

Query: 63  LENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESS 122
           LE+QL EGI+S+K +KE +LLEQL+R R Q    I ENETLRKQ+ E Q   +  L E +
Sbjct: 127 LEHQLNEGILSVKQQKEQILLEQLKRSRLQERQAILENETLRKQIVELQQNTSSNLLEYN 186

Query: 123 PLQR-SYFSDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRK-RSVEGASTDTT 181
           PLQR S +S          E     + ND S+ SLHLGL  D  RKRK   +E  S +TT
Sbjct: 187 PLQRVSPYSSKAEYDCASEEEDDHADNNDHSDTSLHLGLPSDVGRKRKVAKIEPVSNETT 246

[Close]

BLAST of Cucsa.268980 vs. NCBI nr
Match: gi|593689982|ref|XP_007145592.1| (hypothetical protein PHAVU_007G251600g [Phaseolus vulgaris])

HSP 1 Score: 123.6 bits (309), Expect = 3.8e-25
Identity = 73/170 (42.94%), Postives = 100/170 (58.82%), Query Frame = 1


Query: 8   ETLDHPAQLPPSD-----SDAKSSEEEIGKLKLAYTQMRGQELDSLSFIDLQNLENQLRE 67
           ++ + P  +PP D      D    ++EI KL+ AY  M G+ELD LS  +LQ+LENQL E
Sbjct: 76  DSAEQPIDVPPKDVMVMEPDTNLLKDEITKLRSAYLNMMGKELDGLSLKELQHLENQLSE 135

Query: 68  GIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQHRNNITLQESSPLQRSYF 127
           GI+++K+KKE +L+EQL+R R Q +  + ENE LRKQLEE Q++      E S L RS+ 
Sbjct: 136 GILAVKEKKEQVLVEQLRRSRIQEQKAVLENEVLRKQLEEIQNKTKTQFLEFSSLDRSFS 195

Query: 128 SDSKTASTNETEVKTEVEENDRSEISLHLGLSLDGQRKRKRSVEGASTDT 173
            +S  +  N        EEND S+ SL L LS D  R+RK     A  D+
Sbjct: 196 KNSSKSLFN-----CASEENDHSDTSLQLALSTDYGRQRKELKIEACNDS 240

The following BLAST results are available for this feature:

BLAST of Cucsa.268980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGL18_ARATH	4.9e-17	37.01	Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana GN=AGL18 PE=2 SV=1	[more]
AGL15_BRANA	2.6e-10	31.58	Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1	[more]
AGL16_ARATH	1.9e-08	30.60	Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana GN=AGL16 PE=1 SV=1	[more]
JOIN_SOLLC	4.2e-08	25.86	MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1	[more]
AGL24_ARATH	5.4e-08	27.48	MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1	[more]

BLAST of Cucsa.268980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYB1_CUCSA	4.1e-103	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G410880 PE=4 SV=1	[more]
A0A061EXS7_THECC	3.7e-27	43.85	AGAMOUS-like 18, putative OS=Theobroma cacao GN=TCM_024579 PE=4 SV=1	[more]
V7BLX2_PHAVU	2.6e-25	42.94	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G251600g PE=4 SV=1	[more]
A0A067DSV8_CITSI	9.9e-25	43.75	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039982mg PE=4 SV=1	[more]
V4SC55_9ROSI	9.9e-25	43.75	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005698mg PE=4 SV=1	[more]

BLAST of Cucsa.268980 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57390.1	2.8e-18	37.01	AGAMOUS-like 18	[more]
AT3G57230.1	1.1e-09	30.60	AGAMOUS-like 16	[more]
AT4G24540.1	3.1e-09	27.48	AGAMOUS-like 24	[more]
AT2G22540.1	5.8e-08	30.95	K-box region and MADS-box transcription factor family protein	[more]
AT2G14210.1	1.7e-07	24.53	AGAMOUS-like 44	[more]

BLAST of Cucsa.268980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778694571\|ref\|XP_004150520.2\|	5.9e-103	100.00	PREDICTED: MADS-box transcription factor 23-like [Cucumis sativus]	[more]
gi\|700199477\|gb\|KGN54635.1\|	5.9e-103	100.00	hypothetical protein Csa_4G410880 [Cucumis sativus]	[more]
gi\|659111559\|ref\|XP_008455789.1\|	6.7e-99	96.94	PREDICTED: MADS-box transcription factor 23-like [Cucumis melo]	[more]
gi\|590635650\|ref\|XP_007028680.1\|	5.2e-27	43.85	AGAMOUS-like 18, putative [Theobroma cacao]	[more]
gi\|593689982\|ref\|XP_007145592.1\|	3.8e-25	42.94	hypothetical protein PHAVU_007G251600g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002487	TF_Kbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.268980.1	Cucsa.268980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 27..100 score: 2.1
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 16..106 score: 10
None	No IPR available	unknown	Coil	Coil	coord: 93..113 score: -coord: 53..73 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 19..149 score: 2.6
None	No IPR available	PANTHER	PTHR11945:SF175	AGAMOUS-LIKE MADS-BOX PROTEIN AGL18	coord: 19..149 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.268980	Csa4G410880	Cucumber (Chinese Long) v2	cgycuB384
Cucsa.268980	MELO3C019192	Melon (DHL92) v3.5.1	cgymeB449
Cucsa.268980	CSPI04G18510	Wild cucumber (PI 183967)	cgycpiB405
Cucsa.268980	MELO3C019192.2	Melon (DHL92) v3.6.1	cgymedB445
Cucsa.268980	CsaV3_4G028880	Cucumber (Chinese Long) v3	cgycucB411
Cucsa.268980	Cla97C04G070570	Watermelon (97103) v2	cgywmbB468

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None