WMU43500 (transcribed_cluster) Watermelon (97103) v1
The following sequences are available for this feature:
CTCAATCAAGCGAAAAAAGCAACTGAAGCGGCTTTAAGAGACAACAAACAGTTGATGGAGATTGAATTTCCAACTGCTGGACTTGAATCAGTTCCAGTAACTTGTTTTGCCTGTTACAGACCGTATAACCTTATGTATCAGGTGATGGCGAAGGAGGAATTGAAATGACCGAGAGTATGCAATTGATTCGCCAATTTTGTGACTGCTTCATAGATCCATTGAAAGCCACTCGGACAAGAGTACATTTGAAGGAGTTTCATTCAAGTTGGACTACCTCACAAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAGAATGGCTGACCGTGTGAAACCAGAAGATGAGCTTTTTCTGGTTGCATATCCATATTTCAATGTTAATGAAATGCTTGTGGTCGAAGAGCTTTACAATGAAGCTGTCCAAAACACTACACGAAAACTCATAATATTTAATGGAGAGCTCGACCGCATTAGATCTGGCTACTATCCGCCATTTTTCTACCCAAAGCTGGCGGCACTCATGAAGACTCTCTTCCCCAAGATGGAGACTGTATATTACATTCACAACTTCAAGGGGCAGAAAGGAGGAGTTCTTTTCAGGTGCTACCCAGGTCCTTGGAAAGTCCTTAGAAAATTAAGGAACAAATTCGTCTGCGTGCATCAGCAAGAAGACATGCCTTCTCTCAAGGAAGTTGCTTTTAAACATTCTTCCTTCATCTTAAGGGTCTTATATTAGTCTGTATTACCGTTCATTGTGATGTGAAGAGGATGATGCTTTGTTCCTTAGCATCAAAGTCTTTTCTGGTAAAATGCTACATCGACATAATCTGTATATTCTTATCAAATATTTGACGTCCATAAAATTGAAGAAATGCCTAATAACATA
BLAST of WMU43500 vs. TAIR10
Match: AT5G48790.1 (AT5G48790.1 Domain of unknown function (DUF1995)) HSP 1 Score: 287.3 bits (734), Expect = 1.0e-77 Identity = 136/159 (85.53%), Postives = 142/159 (89.31%), Query Frame = 2
HSP 2 Score: 52.0 bits (123), Expect = 7.4e-07 Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 1
HSP 3 Score: 48.5 bits (114), Expect = 8.2e-06 Identity = 22/40 (55.00%), Postives = 25/40 (62.50%), Query Frame = 3
BLAST of WMU43500 vs. NCBI nr
Match: gi|778674897|ref|XP_011650318.1| (PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus]) HSP 1 Score: 312.0 bits (798), Expect = 1.1e-81 Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 2
BLAST of WMU43500 vs. NCBI nr
Match: gi|659095490|ref|XP_008448609.1| (PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 309.7 bits (792), Expect = 5.6e-81 Identity = 147/159 (92.45%), Postives = 152/159 (95.60%), Query Frame = 2
BLAST of WMU43500 vs. NCBI nr
Match: gi|659095488|ref|XP_008448608.1| (PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 309.7 bits (792), Expect = 5.6e-81 Identity = 147/159 (92.45%), Postives = 152/159 (95.60%), Query Frame = 2
BLAST of WMU43500 vs. NCBI nr
Match: gi|703152496|ref|XP_010110433.1| (hypothetical protein L484_022839 [Morus notabilis]) HSP 1 Score: 293.9 bits (751), Expect = 3.2e-76 Identity = 139/156 (89.10%), Postives = 144/156 (92.31%), Query Frame = 2
BLAST of WMU43500 vs. NCBI nr
Match: gi|1009158566|ref|XP_015897355.1| (PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic-like [Ziziphus jujuba]) HSP 1 Score: 292.7 bits (748), Expect = 7.1e-76 Identity = 136/157 (86.62%), Postives = 145/157 (92.36%), Query Frame = 2
The following BLAST results are available for this feature:
The following terms have been associated with this transcribed_cluster:
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
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