BLAST of WMU42820 vs. TAIR10
Match:
AT2G47980.1 (AT2G47980.1 sister-chromatid cohesion protein 3)
HSP 1 Score: 79.7 bits (195), Expect = 1.7e-15
Identity = 60/165 (36.36%), Postives = 81/165 (49.09%), Query Frame = 2
Query: 2 LVASDTVSKEYLGPEIISHFLIHGTSVADIVKHFHCHFEKEG---------------WKY 61
LVASD V K+YLGPEIISH +HG V I+K+ K+ +Y
Sbjct: 839 LVASDVVPKDYLGPEIISHLGMHGPGVTGIIKNLITFLRKKEDDISNIYLESLKRAYHRY 898
Query: 62 PSYLS*SHEKSLPSTDSGTLEK**WAFNRQILSRM*GSWLLGFLEHL*VQLGTSID*IFL 121
S LS E+S LE+ W R++ + G ++ +++ L
Sbjct: 899 SSELSSGREESRVDK---CLEE--W---RELAGGLSGMYIGAARNKYRLEI--------L 958
Query: 122 KIVKDGVEHAFSDAPKNLSFLECAVLHFVSKLPTPDILEIIKDVQ 181
+VK+GVE AF DAPK L FLE A+L F ++L DI++I KDVQ
Sbjct: 959 SVVKEGVEFAFRDAPKQLLFLEVAILPFATRLSVSDIIDIKKDVQ 987
Query: 182 241
Sbjct: 1019 987
Query: 242 301
Sbjct: 1079 987
Query: 302 361
Sbjct: 1139 987
Query: 362 421
Sbjct: 1199 987
Query: 422 452
Sbjct: 1259 987
BLAST of WMU42820 vs. Swiss-Prot
Match:
SCC3_ARATH (Sister-chromatid cohesion protein 3 OS=Arabidopsis thaliana GN=SCC3 PE=1 SV=2)
HSP 1 Score: 79.7 bits (195), Expect = 3.0e-14
Identity = 60/165 (36.36%), Postives = 81/165 (49.09%), Query Frame = 2
Query: 2 LVASDTVSKEYLGPEIISHFLIHGTSVADIVKHFHCHFEKEG---------------WKY 61
LVASD V K+YLGPEIISH +HG V I+K+ K+ +Y
Sbjct: 839 LVASDVVPKDYLGPEIISHLGMHGPGVTGIIKNLITFLRKKEDDISNIYLESLKRAYHRY 898
Query: 62 PSYLS*SHEKSLPSTDSGTLEK**WAFNRQILSRM*GSWLLGFLEHL*VQLGTSID*IFL 121
S LS E+S LE+ W R++ + G ++ +++ L
Sbjct: 899 SSELSSGREESRVDK---CLEE--W---RELAGGLSGMYIGAARNKYRLEI--------L 958
Query: 122 KIVKDGVEHAFSDAPKNLSFLECAVLHFVSKLPTPDILEIIKDVQ 181
+VK+GVE AF DAPK L FLE A+L F ++L DI++I KDVQ
Sbjct: 959 SVVKEGVEFAFRDAPKQLLFLEVAILPFATRLSVSDIIDIKKDVQ 987
Query: 182 241
Sbjct: 1019 987
Query: 242 301
Sbjct: 1079 987
Query: 302 361
Sbjct: 1139 987
Query: 362 421
Sbjct: 1199 987
Query: 422 452
Sbjct: 1259 987
BLAST of WMU42820 vs. NCBI nr
Match:
gi|778662200|ref|XP_011659512.1| (PREDICTED: sister-chromatid cohesion protein 3 [Cucumis sativus])
HSP 1 Score: 146.4 bits (368), Expect = 4.1e-32
Identity = 85/163 (52.15%), Postives = 103/163 (63.19%), Query Frame = 2
Query: 2 LVASDTVSKEYLGPEIISHFLIHGTSVADIVKHFHCHFEKEGWKYPSYLS*SHEKSL--- 61
LVASDTVSKEYLGP IISHFLIHGTSVADIVKHF +K+ P+ + +++
Sbjct: 861 LVASDTVSKEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRH 920
Query: 62 ----------PSTDSGTLEK**WAFNRQILSRM*GSWLLGFLEHL*VQLGTSID*IFLKI 121
PST LE R++ +R+ G+++ + + LKI
Sbjct: 921 TVELSTNSDGPSTGKSFLEC------RELAARLSGTYVGAARNKHRLDI--------LKI 980
Query: 122 VKDGVEHAFSDAPKNLSFLECAVLHFVSKLPTPDILEIIKDVQ 181
VKDG+EHAFSD PKNLSFLECA+LHFVSKL TPDILEIIKDVQ
Sbjct: 981 VKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQ 1009
Query: 182 241
Sbjct: 1041 1009
Query: 242 301
Sbjct: 1101 1009
Query: 302 361
Sbjct: 1161 1009
Query: 362 421
Sbjct: 1221 1009
Query: 422 452
Sbjct: 1281 1009
BLAST of WMU42820 vs. NCBI nr
Match:
gi|659099245|ref|XP_008450503.1| (PREDICTED: sister-chromatid cohesion protein 3 isoform X1 [Cucumis melo])
HSP 1 Score: 146.0 bits (367), Expect = 5.4e-32
Identity = 86/163 (52.76%), Postives = 100/163 (61.35%), Query Frame = 2
Query: 2 LVASDTVSKEYLGPEIISHFLIHGTSVADIVKHFHCHFEKEGWKYPSY------------ 61
LVASDTVSKEYLGP IISHFLIHGTSVADIVKHF +K+ P
Sbjct: 859 LVASDTVSKEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPIIFLEAMKRAYHRH 918
Query: 62 -LS*SHEKSLPSTDSGTLEK**WAFNRQILSRM*GSWLLGFLEHL*VQLGTSID*IFLKI 121
+ S PST LE R++ +R+ G+++ + + LKI
Sbjct: 919 TVELSRNSDGPSTSKSFLEC------RELAARLSGTYVGAARNKHRLDI--------LKI 978
Query: 122 VKDGVEHAFSDAPKNLSFLECAVLHFVSKLPTPDILEIIKDVQ 181
VKDG+EHAFSDAPKNLSFLEC +LHFVSKL TPDILEIIKDVQ
Sbjct: 979 VKDGIEHAFSDAPKNLSFLECVILHFVSKLSTPDILEIIKDVQ 1007
Query: 182 241
Sbjct: 1039 1007
Query: 242 301
Sbjct: 1099 1007
Query: 302 361
Sbjct: 1159 1007
Query: 362 421
Sbjct: 1219 1007
Query: 422 452
Sbjct: 1279 1007
BLAST of WMU42820 vs. NCBI nr
Match:
gi|700210900|gb|KGN65996.1| (hypothetical protein Csa_1G560785 [Cucumis sativus])
HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27
Identity = 76/155 (49.03%), Postives = 95/155 (61.29%), Query Frame = 2
Query: 26 KEYLGPEIISHFLIHGTSVADIVKHFHCHFEKEGWKYPSYLS*SHEKSL----------- 85
+EYLGP IISHFLIHGTSVADIVKHF +K+ P+ + +++
Sbjct: 18 EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNS 77
Query: 86 --PSTDSGTLEK**WAFNRQILSRM*GSWLLGFLEHL*VQLGTSID*IFLKIVKDGVEHA 145
PST LE R++ +R+ G+++ + + LKIVKDG+EHA
Sbjct: 78 DGPSTGKSFLEC------RELAARLSGTYVGAARNKHRLDI--------LKIVKDGIEHA 137
Query: 146 FSDAPKNLSFLECAVLHFVSKLPTPDILEIIKDVQ 205
FSD PKNLSFLECA+LHFVSKL TPDILEIIKDVQ
Sbjct: 138 FSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQ 158
Query: 206 265
Sbjct: 198 158
Query: 266 325
Sbjct: 258 158
Query: 326 385
Sbjct: 318 158
Query: 386 445
Sbjct: 378 158
Query: 446 452
Sbjct: 438 158
BLAST of WMU42820 vs. NCBI nr
Match:
gi|1009147903|ref|XP_015891658.1| (PREDICTED: sister-chromatid cohesion protein 3 [Ziziphus jujuba])
HSP 1 Score: 126.7 bits (317), Expect = 3.4e-26
Identity = 73/157 (46.50%), Postives = 100/157 (63.69%), Query Frame = 2
Query: 2 LVASDTVSKEYLGPEIISHFLIHGTSVADIVKHFHCHFEKEGWKYPSYLS*SHEKSLP-- 61
LVAS+TVSKEYLGPEIISHF++HGTSVA+IVKH +K+ P+ + +K+
Sbjct: 855 LVASETVSKEYLGPEIISHFVMHGTSVAEIVKHLITVLKKKDCDLPNIFLEALKKAYHRY 914
Query: 62 -----STDSGTLEK**WAFNRQILSRM*GSWLLGFLEHL*VQLGTSID*IFLKIVKDGVE 121
D +L + +++ +R+ G+++ + + LKIVK G+E
Sbjct: 915 MVEHIKGDDESLANKYFQECKELAARLSGTFIGAARNKHRLDI--------LKIVKYGIE 974
Query: 122 HAFSDAPKNLSFLECAVLHFVSKLPTPDILEIIKDVQ 181
HAF DAPK LSFLE +VLHFVSKLPTPDIL+++KDVQ
Sbjct: 975 HAFIDAPKQLSFLEGSVLHFVSKLPTPDILDVMKDVQ 1003
Query: 182 241
Sbjct: 1035 1003
Query: 242 301
Sbjct: 1095 1003
Query: 302 361
Sbjct: 1155 1003
Query: 362 421
Sbjct: 1215 1003
Query: 422 452
Sbjct: 1275 1003
BLAST of WMU42820 vs. NCBI nr
Match:
gi|641868747|gb|KDO87431.1| (hypothetical protein CISIN_1g001174mg [Citrus sinensis])
HSP 1 Score: 123.6 bits (309), Expect = 2.9e-25
Identity = 69/157 (43.95%), Postives = 98/157 (62.42%), Query Frame = 2
Query: 2 LVASDTVSKEYLGPEIISHFLIHGTSVADIVKHFHCHFEKEGWKYPSYLS*S-------H 61
L+A D+V KEYLGPEIISHF++HGT+VA+IVKH +K+ + + H
Sbjct: 849 LIAIDSVPKEYLGPEIISHFVMHGTNVAEIVKHLITVLKKKDEDVSTIFLEALKRAYQRH 908
Query: 62 EKSLPSTDSGTLEK**WAFNRQILSRM*GSWLLGFLEHL*VQLGTSID*IFLKIVKDGVE 121
+ +D +L + + +++ SR+ G+++ + LK VK+G++
Sbjct: 909 AVEISRSDDKSLTEKSFVECKELSSRLSGTYVGAARNKHRSDI--------LKTVKEGID 968
Query: 122 HAFSDAPKNLSFLECAVLHFVSKLPTPDILEIIKDVQ 181
+AF DAPK LSFLECAVLHFVSKLPTPDIL+I+KDVQ
Sbjct: 969 YAFLDAPKQLSFLECAVLHFVSKLPTPDILDILKDVQ 997
Query: 182 241
Sbjct: 1029 997
Query: 242 301
Sbjct: 1089 997
Query: 302 361
Sbjct: 1149 997
Query: 362 421
Sbjct: 1209 997
Query: 422 452
Sbjct: 1269 997
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
AT2G47980.1 | 1.7e-15 | 36.36 | sister-chromatid cohesion protein 3 | [more] |
Match Name | E-value | Identity | Description | |
SCC3_ARATH | 3.0e-14 | 36.36 | Sister-chromatid cohesion protein 3 OS=Arabidopsis thaliana GN=SCC3 PE=1 SV=2 | [more] |