WMU04879 (transcribed_cluster) Watermelon (97103) v1
The following sequences are available for this feature:
GAAGCGAGGACGAAGACGAAAACGAAGAAGACGAAGAAGAAGAAGAGGAAGGTGGTGTAATACCAGAAGTAGTGACAAACAGGATGATTAGTAGAATGGGATTTTCAGTGGGGATTCCATTGTTGATAGGGCTTTTGTTCTTCCCATTCTTCTATTACCTCAAAGTTGGGCTGAAGATTGATGCGCCCTCATGGGGTGCCGGTTATAGTCTCATTCTTCTTCTTTGGTTCAGCTTTTGTTGGGAGTTAGCTATGGGATTGTGTCCTCTAGTTGGGATCCTATGAGGGAAGGCTCTCTGTTGGGTTGGAATGAAGCTCAAAAGAATTGGCCTGTTTTTTGGTCAGTCCATTTGGGGTGGATCTAATAAGAAATAGATGAATTGTCCTTTTTTTTTTTTTTATAT
BLAST of WMU04879 vs. TAIR10
Match: AT4G19100.1 (AT4G19100.1 Protein of unknown function (DUF3464)) HSP 1 Score: 70.1 bits (170), Expect = 1.2e-12 Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 2
HSP 2 Score: 52.8 bits (125), Expect = 1.9e-07 Identity = 41/121 (33.88%), Postives = 50/121 (41.32%), Query Frame = 3
BLAST of WMU04879 vs. Swiss-Prot
Match: PAM68_ARATH (Protein PAM68, chloroplastic OS=Arabidopsis thaliana GN=PAM68 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.1e-11 Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 2
HSP 2 Score: 52.8 bits (125), Expect = 3.4e-06 Identity = 41/121 (33.88%), Postives = 50/121 (41.32%), Query Frame = 3
BLAST of WMU04879 vs. TrEMBL
Match: B9S1K7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0865870 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.8e-10 Identity = 31/35 (88.57%), Postives = 31/35 (88.57%), Query Frame = 2
BLAST of WMU04879 vs. TrEMBL
Match: B9S1K7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0865870 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 5.9e-05 Identity = 43/114 (37.72%), Postives = 54/114 (47.37%), Query Frame = 3
HSP 2 Score: 71.6 bits (174), Expect = 8.0e-10 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 2
BLAST of WMU04879 vs. TrEMBL
Match: A0A067KK85_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10801 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.0e-05 Identity = 43/114 (37.72%), Postives = 55/114 (48.25%), Query Frame = 3
HSP 2 Score: 71.6 bits (174), Expect = 8.0e-10 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 2
BLAST of WMU04879 vs. TrEMBL
Match: A0A059CJY0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02600 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 6.5e-04 Identity = 26/47 (55.32%), Postives = 29/47 (61.70%), Query Frame = 3
HSP 2 Score: 71.6 bits (174), Expect = 8.0e-10 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 2
BLAST of WMU04879 vs. TrEMBL
Match: A0A059CKM2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02600 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 6.5e-04 Identity = 26/47 (55.32%), Postives = 29/47 (61.70%), Query Frame = 3
HSP 2 Score: 71.6 bits (174), Expect = 8.0e-10 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 2
BLAST of WMU04879 vs. NCBI nr
Match: gi|255557685|ref|XP_002519872.1| (PREDICTED: protein PAM68, chloroplastic [Ricinus communis]) HSP 1 Score: 75.1 bits (183), Expect = 1.0e-10 Identity = 31/35 (88.57%), Postives = 31/35 (88.57%), Query Frame = 2
BLAST of WMU04879 vs. NCBI nr
Match: gi|470128440|ref|XP_004300149.1| (PREDICTED: protein PAM68, chloroplastic [Fragaria vesca subsp. vesca]) HSP 1 Score: 73.9 bits (180), Expect = 2.3e-10 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 2
BLAST of WMU04879 vs. NCBI nr
Match: gi|659095484|ref|XP_008448605.1| (PREDICTED: protein PAM68, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 73.9 bits (180), Expect = 2.3e-10 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 2
BLAST of WMU04879 vs. NCBI nr
Match: gi|659095482|ref|XP_008448604.1| (PREDICTED: protein PAM68, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 73.9 bits (180), Expect = 2.3e-10 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 2
BLAST of WMU04879 vs. NCBI nr
Match: gi|629113486|gb|KCW78446.1| (hypothetical protein EUGRSUZ_D02600 [Eucalyptus grandis]) HSP 1 Score: 72.8 bits (177), Expect = 5.2e-10 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 2
The following BLAST results are available for this feature:
The following terms have been associated with this transcribed_cluster:
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
|