MELO3C013530T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGCGAGAAGGAAGGAAAAGGAAGTGCGCGAGGAGACACAAGAAGAAAATATGCAAAAAGACAGAGAAGGTGAAGTTTGGGCTATTAAAAATAAAGGTGAAGGTAGAGGGCGTTAAGGCCCTAGCAGAGGAGGAGAAGGAAACAAAGATAAGGGAGCAAGAAGAGCTTCTTAACCAGGGTGAGAAAGTAGCCCTCTTCGCGGGAAAAGACAAAGACAAAGAAAAGACTTTTGATGAGCATTGCAAGGAGTTTGAGAAAGAGATTGAGGAGTTAAGTCATTTGGAGGACAAGGGGGTAAGACCCGTGAAAAAAAGAAAGGTTACGATGAAGAAGAAGGCTCTGAGAGTAATTTACAAAGAGGCGAGCTAG ATGAGGCGAGAAGGAAGGAAAAGGAAGTGCGCGAGGAGACACAAGAAGAAAATATGCAAAAAGACAGAGAAGGTGAAGTTTGGGCTATTAAAAATAAAGGTGAAGGTAGAGGGCGTTAAGGCCCTAGCAGAGGAGGAGAAGGAAACAAAGATAAGGGAGCAAGAAGAGCTTCTTAACCAGGGTGAGAAAGTAGCCCTCTTCGCGGGAAAAGACAAAGACAAAGAAAAGACTTTTGATGAGCATTGCAAGGAGTTTGAGAAAGAGATTGAGGAGTTAAGTCATTTGGAGGACAAGGGGGTAAGACCCGTGAAAAAAAGAAAGGTTACGATGAAGAAGAAGGCTCTGAGAGTAATTTACAAAGAGGCGAGCTAG ATGAGGCGAGAAGGAAGGAAAAGGAAGTGCGCGAGGAGACACAAGAAGAAAATATGCAAAAAGACAGAGAAGGTGAAGTTTGGGCTATTAAAAATAAAGGTGAAGGTAGAGGGCGTTAAGGCCCTAGCAGAGGAGGAGAAGGAAACAAAGATAAGGGAGCAAGAAGAGCTTCTTAACCAGGGTGAGAAAGTAGCCCTCTTCGCGGGAAAAGACAAAGACAAAGAAAAGACTTTTGATGAGCATTGCAAGGAGTTTGAGAAAGAGATTGAGGAGTTAAGTCATTTGGAGGACAAGGGGGTAAGACCCGTGAAAAAAAGAAAGGTTACGATGAAGAAGAAGGCTCTGAGAGTAATTTACAAAGAGGCGAGCTAG MRREGRKRKCARRHKKKICKKTEKVKFGLLKIKVKVEGVKALAEEEKETKIREQEELLNQGEKVALFAGKDKDKEKTFDEHCKEFEKEIEELSHLEDKGVRPVKKRKVTMKKKALRVIYKEAS*
BLAST of MELO3C013530T1 vs. TrEMBL
Match: A0A0A0LNF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145900 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.3e-10 Identity = 40/80 (50.00%), Postives = 56/80 (70.00%), Query Frame = 1
BLAST of MELO3C013530T1 vs. TrEMBL
Match: A0A0A0K7W9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290550 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.7e-09 Identity = 35/77 (45.45%), Postives = 58/77 (75.32%), Query Frame = 1
BLAST of MELO3C013530T1 vs. TrEMBL
Match: A0A0A0L7S0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G418760 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06 Identity = 34/97 (35.05%), Postives = 57/97 (58.76%), Query Frame = 1
BLAST of MELO3C013530T1 vs. TrEMBL
Match: A0A0A0KN01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G366680 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.9e-06 Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 1
BLAST of MELO3C013530T1 vs. NCBI nr
Match: gi|659083323|ref|XP_008442290.1| (PREDICTED: stress response protein NST1-like [Cucumis melo]) HSP 1 Score: 112.5 bits (280), Expect = 5.5e-22 Identity = 63/101 (62.38%), Postives = 75/101 (74.26%), Query Frame = 1
BLAST of MELO3C013530T1 vs. NCBI nr
Match: gi|659123312|ref|XP_008461598.1| (PREDICTED: PERQ amino acid-rich with GYF domain-containing protein 2-like [Cucumis melo]) HSP 1 Score: 100.9 bits (250), Expect = 1.6e-18 Identity = 54/92 (58.70%), Postives = 68/92 (73.91%), Query Frame = 1
BLAST of MELO3C013530T1 vs. NCBI nr
Match: gi|659130998|ref|XP_008465464.1| (PREDICTED: DNA ligase 1-like [Cucumis melo]) HSP 1 Score: 100.5 bits (249), Expect = 2.1e-18 Identity = 53/84 (63.10%), Postives = 67/84 (79.76%), Query Frame = 1
BLAST of MELO3C013530T1 vs. NCBI nr
Match: gi|659090014|ref|XP_008445787.1| (PREDICTED: axoneme-associated protein mst101(3)-like [Cucumis melo]) HSP 1 Score: 89.0 bits (219), Expect = 6.5e-15 Identity = 45/72 (62.50%), Postives = 57/72 (79.17%), Query Frame = 1
BLAST of MELO3C013530T1 vs. NCBI nr
Match: gi|659109371|ref|XP_008454680.1| (PREDICTED: uncharacterized protein LOC103495036 [Cucumis melo]) HSP 1 Score: 79.7 bits (195), Expect = 3.9e-12 Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
|