MELO3C013530 (gene) Melon (DHL92) v3.5.1

NameMELO3C013530
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Descriptionindole-3-acetic acid inducible 19
Locationchr11 : 15891865 .. 15892236 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCGAGAAGGAAGGAAAAGGAAGTGCGCGAGGAGACACAAGAAGAAAATATGCAAAAAGACAGAGAAGGTGAAGTTTGGGCTATTAAAAATAAAGGTGAAGGTAGAGGGCGTTAAGGCCCTAGCAGAGGAGGAGAAGGAAACAAAGATAAGGGAGCAAGAAGAGCTTCTTAACCAGGGTGAGAAAGTAGCCCTCTTCGCGGGAAAAGACAAAGACAAAGAAAAGACTTTTGATGAGCATTGCAAGGAGTTTGAGAAAGAGATTGAGGAGTTAAGTCATTTGGAGGACAAGGGGGTAAGACCCGTGAAAAAAAGAAAGGTTACGATGAAGAAGAAGGCTCTGAGAGTAATTTACAAAGAGGCGAGCTAG

mRNA sequence

ATGAGGCGAGAAGGAAGGAAAAGGAAGTGCGCGAGGAGACACAAGAAGAAAATATGCAAAAAGACAGAGAAGGTGAAGTTTGGGCTATTAAAAATAAAGGTGAAGGTAGAGGGCGTTAAGGCCCTAGCAGAGGAGGAGAAGGAAACAAAGATAAGGGAGCAAGAAGAGCTTCTTAACCAGGGTGAGAAAGTAGCCCTCTTCGCGGGAAAAGACAAAGACAAAGAAAAGACTTTTGATGAGCATTGCAAGGAGTTTGAGAAAGAGATTGAGGAGTTAAGTCATTTGGAGGACAAGGGGGTAAGACCCGTGAAAAAAAGAAAGGTTACGATGAAGAAGAAGGCTCTGAGAGTAATTTACAAAGAGGCGAGCTAG

Coding sequence (CDS)

ATGAGGCGAGAAGGAAGGAAAAGGAAGTGCGCGAGGAGACACAAGAAGAAAATATGCAAAAAGACAGAGAAGGTGAAGTTTGGGCTATTAAAAATAAAGGTGAAGGTAGAGGGCGTTAAGGCCCTAGCAGAGGAGGAGAAGGAAACAAAGATAAGGGAGCAAGAAGAGCTTCTTAACCAGGGTGAGAAAGTAGCCCTCTTCGCGGGAAAAGACAAAGACAAAGAAAAGACTTTTGATGAGCATTGCAAGGAGTTTGAGAAAGAGATTGAGGAGTTAAGTCATTTGGAGGACAAGGGGGTAAGACCCGTGAAAAAAAGAAAGGTTACGATGAAGAAGAAGGCTCTGAGAGTAATTTACAAAGAGGCGAGCTAG

Protein sequence

MRREGRKRKCARRHKKKICKKTEKVKFGLLKIKVKVEGVKALAEEEKETKIREQEELLNQGEKVALFAGKDKDKEKTFDEHCKEFEKEIEELSHLEDKGVRPVKKRKVTMKKKALRVIYKEAS*
BLAST of MELO3C013530 vs. TrEMBL
Match: A0A0A0LNF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145900 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-10
Identity = 40/80 (50.00%), Postives = 56/80 (70.00%), Query Frame = 1

Query: 28  GLLKIKVKVEGVKALAEEEKETKIREQEELLNQGEKVALFAGKDKDKEKT--FDEHCKEF 87
           G+LKIKVK  G+KALA+E++ET +RE EEL ++ ++VAL   KDK+KEK     E  +E 
Sbjct: 3   GILKIKVKAHGIKALAQEKQETNLREWEELHSKDDEVALSVEKDKEKEKEKGDQEIAEEL 62

Query: 88  EKEIEELSHLEDKGVRPVKK 106
           EKEI  +S LE++  R  K+
Sbjct: 63  EKEIGHMSSLEEEAPRRQKR 82

BLAST of MELO3C013530 vs. TrEMBL
Match: A0A0A0K7W9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290550 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-09
Identity = 35/77 (45.45%), Postives = 58/77 (75.32%), Query Frame = 1

Query: 40  KALAEEEKETKIREQEELLNQGEKVALFAGKDKDKEKTFDEHCKEFEKEIEELSHLEDKG 99
           KAL +++K+ K+REQ+ELLN+ ++  +   K K ++   +E C+EFE+++E+LS LED+ 
Sbjct: 6   KALMQDKKKVKLREQKELLNKIDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPLEDEV 65

Query: 100 VRPVKKRKVTMKKKALR 117
           V+P+KK KVT+KK  L+
Sbjct: 66  VKPLKK-KVTVKKSVLK 81

BLAST of MELO3C013530 vs. TrEMBL
Match: A0A0A0L7S0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G418760 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06
Identity = 34/97 (35.05%), Postives = 57/97 (58.76%), Query Frame = 1

Query: 2   RREGRKRKCARRHKKKICKKTEKVKFGLLKIKVKVEGVKALAEEEKETKIREQEELLNQG 61
           R E + R   R  +K+  +K +      L +  +   ++   +E+KE +++EQEELLN+ 
Sbjct: 15  REEEKNRLNLRGLQKRFKRKRKMWHMTFLNLNSRCIALRP--QEKKEMRLKEQEELLNKV 74

Query: 62  EKVALFAGKDKDKEKTFDEHCKEFEKEIEELSHLEDK 99
           +KV LF  K K K    +E C+E EK++E+LS +ED+
Sbjct: 75  DKVTLFVKKGKAKRTQSEEICEELEKKLEDLSPVEDE 109

BLAST of MELO3C013530 vs. TrEMBL
Match: A0A0A0KN01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G366680 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-06
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 1

Query: 47  KETKIREQEELLNQGEKVALFAGKDKDKEKTFDEHCKEFEKEIEELSHLEDKGVRPVKKR 106
           +E   RE+EELLN+ +K+AL   +DK K KT  E C E EKE+E+ + LE+  ++P +KR
Sbjct: 2   REKGNREREELLNKVKKIALSVERDKTK-KTPSELCDELEKELEDENSLEEV-IKPSRKR 61

Query: 107 KVTMKKKALRVIY 120
           KVTMKK    +I+
Sbjct: 62  KVTMKKVFQSLIF 72

BLAST of MELO3C013530 vs. NCBI nr
Match: gi|659083323|ref|XP_008442290.1| (PREDICTED: stress response protein NST1-like [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 5.5e-22
Identity = 63/101 (62.38%), Postives = 75/101 (74.26%), Query Frame = 1

Query: 17  KICKKTEKVKFGLLKIKVKVEGVKALAEEEKETKIREQEELLNQGEKVALFAGKDKDKEK 76
           K  +KTEKV+  LLKIKVK +   ALAE +KE K+R+ EELLN+ +K+AL   K K+KEK
Sbjct: 12  KAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLALSVEKGKEKEK 71

Query: 77  TFDEHCKEFEKEIEELSHLEDKGV-RPVKKRKVTMKKKALR 117
           TF+E  KEFEKEI+E S LED  V RP KKR VTMKKK LR
Sbjct: 72  TFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLR 112

BLAST of MELO3C013530 vs. NCBI nr
Match: gi|659123312|ref|XP_008461598.1| (PREDICTED: PERQ amino acid-rich with GYF domain-containing protein 2-like [Cucumis melo])

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-18
Identity = 54/92 (58.70%), Postives = 68/92 (73.91%), Query Frame = 1

Query: 16  KKICKKTEKVKFGLLKIKVKVEGVKALAEEEKETKIREQEELLNQGEKVALFAGKDKDKE 75
           +K  KKT+K+K  LLKIKVK +GVKALAEE+KE+ +RE+EELLN+ +K+AL   K K KE
Sbjct: 47  RKPLKKTKKLKKWLLKIKVKAQGVKALAEEKKESMLREREELLNEVDKMALLVNKSKGKE 106

Query: 76  KTFDEHCKEFEKEIEELSHLEDKGVRPVKKRK 108
           KT D + KEFEKE+EE   LED  V    K+K
Sbjct: 107 KTTDGYDKEFEKELEEFISLEDGVVEKQPKKK 138

BLAST of MELO3C013530 vs. NCBI nr
Match: gi|659130998|ref|XP_008465464.1| (PREDICTED: DNA ligase 1-like [Cucumis melo])

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-18
Identity = 53/84 (63.10%), Postives = 67/84 (79.76%), Query Frame = 1

Query: 28  GLLKIKVKVEGVKALAEEEKETKIREQEELLNQGEKVALFAGKDKDKEKTFDEHCKEFEK 87
           GLLKIKVK +G+KAL EE+KE K+RE+EELLN+ +KVAL   K K+ EKTF+EHC+EF+K
Sbjct: 43  GLLKIKVKAQGIKALEEEKKEIKLREKEELLNKVDKVALSVEKRKE-EKTFEEHCEEFKK 102

Query: 88  EIEELSHLEDKGVRPVKKRKVTMK 112
           EIEELS LED+ V    K+K  M+
Sbjct: 103 EIEELSPLEDEVVEKSSKKKRIME 125

BLAST of MELO3C013530 vs. NCBI nr
Match: gi|659090014|ref|XP_008445787.1| (PREDICTED: axoneme-associated protein mst101(3)-like [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 6.5e-15
Identity = 45/72 (62.50%), Postives = 57/72 (79.17%), Query Frame = 1

Query: 45  EEKETKIREQEELLNQGEKVALFAGKDKDKEKTFDEHCKEFEKEIEELSHLEDKGVRPVK 104
           E+KETK+RE+EELL + + VAL A KDK +EK F+ H +EFEKEI++L  LE+K +RP K
Sbjct: 92  EKKETKLREREELLGKVDNVALSAEKDKCEEKNFEVHYEEFEKEIDKLCPLEEKVIRPAK 151

Query: 105 KRKVTMKKKALR 117
           KR  TMKKKALR
Sbjct: 152 KRTFTMKKKALR 163

BLAST of MELO3C013530 vs. NCBI nr
Match: gi|659109371|ref|XP_008454680.1| (PREDICTED: uncharacterized protein LOC103495036 [Cucumis melo])

HSP 1 Score: 79.7 bits (195), Expect = 3.9e-12
Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 1

Query: 40  KALAEEEKETKIREQEELLNQGEKVALFAGKDKDKEKTFDEHCKEFEKEIEELSHLEDKG 99
           KALA+E+KETK+REQEELLN+ EKVAL   K K K KT +E+CKEFE+E+EELS  +D+ 
Sbjct: 53  KALADEKKETKLREQEELLNKVEKVALSTEKGKTK-KTTEEYCKEFEREVEELSPFKDEE 112

Query: 100 VRPVKKRKVTMKKKALRVIYK 121
           V  VK  K+  K + + + YK
Sbjct: 113 V--VKPPKI-KKARCMNLFYK 129

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LNF9_CUCSA3.3e-1050.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145900 PE=4 SV=1[more]
A0A0A0K7W9_CUCSA1.7e-0945.45Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290550 PE=4 SV=1[more]
A0A0A0L7S0_CUCSA1.7e-0635.05Uncharacterized protein OS=Cucumis sativus GN=Csa_3G418760 PE=4 SV=1[more]
A0A0A0KN01_CUCSA2.9e-0647.95Uncharacterized protein OS=Cucumis sativus GN=Csa_5G366680 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659083323|ref|XP_008442290.1|5.5e-2262.38PREDICTED: stress response protein NST1-like [Cucumis melo][more]
gi|659123312|ref|XP_008461598.1|1.6e-1858.70PREDICTED: PERQ amino acid-rich with GYF domain-containing protein 2-like [Cucum... [more]
gi|659130998|ref|XP_008465464.1|2.1e-1863.10PREDICTED: DNA ligase 1-like [Cucumis melo][more]
gi|659090014|ref|XP_008445787.1|6.5e-1562.50PREDICTED: axoneme-associated protein mst101(3)-like [Cucumis melo][more]
gi|659109371|ref|XP_008454680.1|3.9e-1256.79PREDICTED: uncharacterized protein LOC103495036 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013530T1MELO3C013530T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 40..60
scor