MELO3C013627T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013627T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Basic helix-loop-helix DNA-binding superfamily protein
Location	chr11 : 18457169 .. 18457698 (+)
Sequence length	420

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCTCTCTACTCCAAATTGAATTCCCTTCTCCCATCCCATCACTCAAATGTTTGTTCATTATTCTTTTTCTCTCTCTTTCTCTTTTCTTTTCTTTTCTTTTCTTTTCTCCATATATTATTACATTATCTATTGGTCCTTCTTCACTAAACCTTTTGTAGGATCAGTTGCCACGGACAGTTACAGACCAGATAGAGGCAGCAATAAATTACATCAAATCATTAGAGATTAAGCTGAAACAGGATGAGGAGAAGAAGGAGAGATATTTAAGAAGATCCAAAATTGCATCGTCCTCGACGGCATCCTCTTCGTCATACTCGGCATTGTCGATAAGCCAGAATAGGAATGTACCTGAATTGAAAATTAAAGAGATGGGCTCTGCTGTGGAGGTTGTTTTAAAGACTGGGTTGGAGGATCGCTCAATGTTTTATGAGACTATTCGTATCCTTAATGAGGAACGAGCTGAGATCATCAATGTCAGTTATTCTCTTCTTGATGACACAATCCTATATTCACTCCATGCTGAG

mRNA sequence

ATGAAATCTCTCTACTCCAAATTGAATTCCCTTCTCCCATCCCATCACTCAAATGATCAGTTGCCACGGACAGTTACAGACCAGATAGAGGCAGCAATAAATTACATCAAATCATTAGAGATTAAGCTGAAACAGGATGAGGAGAAGAAGGAGAGATATTTAAGAAGATCCAAAATTGCATCGTCCTCGACGGCATCCTCTTCGTCATACTCGGCATTGTCGATAAGCCAGAATAGGAATGTACCTGAATTGAAAATTAAAGAGATGGGCTCTGCTGTGGAGGTTGTTTTAAAGACTGGGTTGGAGGATCGCTCAATGTTTTATGAGACTATTCGTATCCTTAATGAGGAACGAGCTGAGATCATCAATGTCAGTTATTCTCTTCTTGATGACACAATCCTATATTCACTCCATGCTGAG

Coding sequence (CDS)

ATGAAATCTCTCTACTCCAAATTGAATTCCCTTCTCCCATCCCATCACTCAAATGATCAGTTGCCACGGACAGTTACAGACCAGATAGAGGCAGCAATAAATTACATCAAATCATTAGAGATTAAGCTGAAACAGGATGAGGAGAAGAAGGAGAGATATTTAAGAAGATCCAAAATTGCATCGTCCTCGACGGCATCCTCTTCGTCATACTCGGCATTGTCGATAAGCCAGAATAGGAATGTACCTGAATTGAAAATTAAAGAGATGGGCTCTGCTGTGGAGGTTGTTTTAAAGACTGGGTTGGAGGATCGCTCAATGTTTTATGAGACTATTCGTATCCTTAATGAGGAACGAGCTGAGATCATCAATGTCAGTTATTCTCTTCTTGATGACACAATCCTATATTCACTCCATGCTGAG

Protein sequence

MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAEIINVSYSLLDDTILYSLHAE

Homology

[Close]

BLAST of MELO3C013627T1 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 40/143 (27.97%), Postives = 72/143 (50.35%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKE--RYLRRSK 60
           M SLY+ L SLLP H    +  R+ +DQ+  A+NYIK L+ K+K+   +++    L R  
Sbjct: 17  MASLYASLRSLLPLHFIKGK--RSTSDQVNEAVNYIKYLQRKIKELSVRRDDLMVLSRGS 76

Query: 61  IASSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTG-LEDRSMFYETIRILNEE 120
           +  SS         +   +N  V    +++    VE++L +     +  F   +++L+E 
Sbjct: 77  LLGSSNGDFKEDVEMISGKNHVV----VRQCLVGVEIMLSSRCCGGQPRFSSVLQVLSEY 136

Query: 121 RAEIINVSYSLLDDTILYSLHAE 141
              ++N   S++DD ++Y++ AE
Sbjct: 137 GLCLLNSISSIVDDRLVYTIQAE 153

[Close]

BLAST of MELO3C013627T1 vs. TrEMBL
Match: A0A061E482_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_008127 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-25
Identity = 66/140 (47.14%), Postives = 100/140 (71.43%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS+LNSLLP H S +  P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +  
Sbjct: 36  MKNLYSRLNSLLPRHTSKE--PLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKRSH 95

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
             +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE A+
Sbjct: 96  RCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEGAQ 155

Query: 121 IINVSYSLLDDTILYSLHAE 141
           ++N ++S+L +TI++ +HAE
Sbjct: 156 VLNANFSVLGNTIVHIVHAE 168

[Close]

BLAST of MELO3C013627T1 vs. TrEMBL
Match: A0A061E322_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 3 OS=Theobroma cacao GN=TCM_008127 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-25
Identity = 66/140 (47.14%), Postives = 100/140 (71.43%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS+LNSLLP H S +  P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +  
Sbjct: 36  MKNLYSRLNSLLPRHTSKE--PLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKRSH 95

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
             +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE A+
Sbjct: 96  RCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEGAQ 155

Query: 121 IINVSYSLLDDTILYSLHAE 141
           ++N ++S+L +TI++ +HAE
Sbjct: 156 VLNANFSVLGNTIVHIVHAE 168

[Close]

BLAST of MELO3C013627T1 vs. TrEMBL
Match: A0A061EAX8_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_008127 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.1e-25
Identity = 67/142 (47.18%), Postives = 100/142 (70.42%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSND--QLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSK 60
           MK+LYS+LNSLLP H S    Q P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +
Sbjct: 36  MKNLYSRLNSLLPRHTSKWILQEPLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKR 95

Query: 61  IASSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEER 120
               +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE 
Sbjct: 96  SHRCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEG 155

Query: 121 AEIINVSYSLLDDTILYSLHAE 141
           A+++N ++S+L +TI++ +HAE
Sbjct: 156 AQVLNANFSVLGNTIVHIVHAE 172

[Close]

BLAST of MELO3C013627T1 vs. TrEMBL
Match: V4UE19_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.9e-23
Identity = 61/140 (43.57%), Postives = 98/140 (70.00%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS L SLLP+  S ++L  ++ DQ++ AINYIK LE KLK+ ++KKE    R +  
Sbjct: 59  MKNLYSTLKSLLPNQPSKEEL--SLPDQVDEAINYIKMLETKLKECKKKKESLQGRER-- 118

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
           S +  S  + + L  S +   PE++I EMGS +EV+L +G++D+ +FY+ IRIL+++ AE
Sbjct: 119 SHACISDGTEARLMTSSSPKAPEIEIHEMGSNLEVILTSGVDDQFIFYDVIRILHQDGAE 178

Query: 121 IINVSYSLLDDTILYSLHAE 141
           I+N ++S++ +TI + +HAE
Sbjct: 179 ILNANFSVVGNTIFHVIHAE 194

[Close]

BLAST of MELO3C013627T1 vs. TrEMBL
Match: V4U3N5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.9e-23
Identity = 61/140 (43.57%), Postives = 98/140 (70.00%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS L SLLP+  S ++L  ++ DQ++ AINYIK LE KLK+ ++KKE    R +  
Sbjct: 59  MKNLYSTLKSLLPNQPSKEEL--SLPDQVDEAINYIKMLETKLKECKKKKESLQGRER-- 118

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
           S +  S  + + L  S +   PE++I EMGS +EV+L +G++D+ +FY+ IRIL+++ AE
Sbjct: 119 SHACISDGTEARLMTSSSPKAPEIEIHEMGSNLEVILTSGVDDQFIFYDVIRILHQDGAE 178

Query: 121 IINVSYSLLDDTILYSLHAE 141
           I+N ++S++ +TI + +HAE
Sbjct: 179 ILNANFSVVGNTIFHVIHAE 194

[Close]

BLAST of MELO3C013627T1 vs. TAIR10
Match: AT4G20970.1 (AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-23
Identity = 58/142 (40.85%), Postives = 90/142 (63.38%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MKSLYS+L SLLP H S +  P T+ DQ++ A NYIK L++ +++  E+K   +  + + 
Sbjct: 27  MKSLYSELISLLPHHSSTE--PLTLPDQLDEAANYIKKLQVNVEKKRERKRNLVATTTLE 86

Query: 61  S-SSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEE-R 120
             +S  SSS  S++ +S  R +P+++I+E GS   + L T LE + MF E IR+L EE  
Sbjct: 87  KLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTSLEHKFMFCEIIRVLTEELG 146

Query: 121 AEIINVSYSLLDDTILYSLHAE 141
           AEI +  YS++DD + ++LH +
Sbjct: 147 AEITHAGYSIVDDAVFHTLHCK 166

[Close]

BLAST of MELO3C013627T1 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08
Identity = 40/143 (27.97%), Postives = 72/143 (50.35%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKE--RYLRRSK 60
           M SLY+ L SLLP H    +  R+ +DQ+  A+NYIK L+ K+K+   +++    L R  
Sbjct: 17  MASLYASLRSLLPLHFIKGK--RSTSDQVNEAVNYIKYLQRKIKELSVRRDDLMVLSRGS 76

Query: 61  IASSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTG-LEDRSMFYETIRILNEE 120
           +  SS         +   +N  V    +++    VE++L +     +  F   +++L+E 
Sbjct: 77  LLGSSNGDFKEDVEMISGKNHVV----VRQCLVGVEIMLSSRCCGGQPRFSSVLQVLSEY 136

Query: 121 RAEIINVSYSLLDDTILYSLHAE 141
              ++N   S++DD ++Y++ AE
Sbjct: 137 GLCLLNSISSIVDDRLVYTIQAE 153

[Close]

BLAST of MELO3C013627T1 vs. NCBI nr
Match: gi|590690815|ref|XP_007043611.1| (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-25
Identity = 66/140 (47.14%), Postives = 100/140 (71.43%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS+LNSLLP H S +  P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +  
Sbjct: 36  MKNLYSRLNSLLPRHTSKE--PLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKRSH 95

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
             +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE A+
Sbjct: 96  RCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEGAQ 155

Query: 121 IINVSYSLLDDTILYSLHAE 141
           ++N ++S+L +TI++ +HAE
Sbjct: 156 VLNANFSVLGNTIVHIVHAE 168

[Close]

BLAST of MELO3C013627T1 vs. NCBI nr
Match: gi|590690822|ref|XP_007043613.1| (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 3 [Theobroma cacao])

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-25
Identity = 66/140 (47.14%), Postives = 100/140 (71.43%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS+LNSLLP H S +  P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +  
Sbjct: 36  MKNLYSRLNSLLPRHTSKE--PLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKRSH 95

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
             +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE A+
Sbjct: 96  RCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEGAQ 155

Query: 121 IINVSYSLLDDTILYSLHAE 141
           ++N ++S+L +TI++ +HAE
Sbjct: 156 VLNANFSVLGNTIVHIVHAE 168

[Close]

BLAST of MELO3C013627T1 vs. NCBI nr
Match: gi|590690818|ref|XP_007043612.1| (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-24
Identity = 67/142 (47.18%), Postives = 100/142 (70.42%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSND--QLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSK 60
           MK+LYS+LNSLLP H S    Q P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +
Sbjct: 36  MKNLYSRLNSLLPRHTSKWILQEPLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKR 95

Query: 61  IASSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEER 120
               +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE 
Sbjct: 96  SHRCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEG 155

Query: 121 AEIINVSYSLLDDTILYSLHAE 141
           A+++N ++S+L +TI++ +HAE
Sbjct: 156 AQVLNANFSVLGNTIVHIVHAE 172

[Close]

BLAST of MELO3C013627T1 vs. NCBI nr
Match: gi|567909957|ref|XP_006447292.1| (hypothetical protein CICLE_v10016466mg [Citrus clementina])

HSP 1 Score: 115.9 bits (289), Expect = 5.6e-23
Identity = 61/140 (43.57%), Postives = 98/140 (70.00%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS L SLLP+  S ++L  ++ DQ++ AINYIK LE KLK+ ++KKE    R +  
Sbjct: 59  MKNLYSTLKSLLPNQPSKEEL--SLPDQVDEAINYIKMLETKLKECKKKKESLQGRER-- 118

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
           S +  S  + + L  S +   PE++I EMGS +EV+L +G++D+ +FY+ IRIL+++ AE
Sbjct: 119 SHACISDGTEARLMTSSSPKAPEIEIHEMGSNLEVILTSGVDDQFIFYDVIRILHQDGAE 178

Query: 121 IINVSYSLLDDTILYSLHAE 141
           I+N ++S++ +TI + +HAE
Sbjct: 179 ILNANFSVVGNTIFHVIHAE 194

[Close]

BLAST of MELO3C013627T1 vs. NCBI nr
Match: gi|567909955|ref|XP_006447291.1| (hypothetical protein CICLE_v10016466mg [Citrus clementina])

HSP 1 Score: 115.9 bits (289), Expect = 5.6e-23
Identity = 61/140 (43.57%), Postives = 98/140 (70.00%), Query Frame = 1


Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS L SLLP+  S ++L  ++ DQ++ AINYIK LE KLK+ ++KKE    R +  
Sbjct: 59  MKNLYSTLKSLLPNQPSKEEL--SLPDQVDEAINYIKMLETKLKECKKKKESLQGRER-- 118

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
           S +  S  + + L  S +   PE++I EMGS +EV+L +G++D+ +FY+ IRIL+++ AE
Sbjct: 119 SHACISDGTEARLMTSSSPKAPEIEIHEMGSNLEVILTSGVDDQFIFYDVIRILHQDGAE 178

Query: 121 IINVSYSLLDDTILYSLHAE 141
           I+N ++S++ +TI + +HAE
Sbjct: 179 ILNANFSVVGNTIFHVIHAE 194

The following BLAST results are available for this feature:

BLAST of MELO3C013627T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH036_ARATH	1.9e-07	27.97	Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1	[more]

BLAST of MELO3C013627T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061E482_THECC	2.4e-25	47.14	Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 OS=Th...	[more]
A0A061E322_THECC	2.4e-25	47.14	Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 3 OS=Th...	[more]
A0A061EAX8_THECC	7.1e-25	47.18	Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 OS=Th...	[more]
V4UE19_9ROSI	3.9e-23	43.57	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1	[more]
V4U3N5_9ROSI	3.9e-23	43.57	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1	[more]

BLAST of MELO3C013627T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G20970.1	1.6e-23	40.85	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	1.1e-08	27.97	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of MELO3C013627T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|590690815\|ref\|XP_007043611.1\|	3.5e-25	47.14	Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 [Theo...	[more]
gi\|590690822\|ref\|XP_007043613.1\|	3.5e-25	47.14	Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 3 [Theo...	[more]
gi\|590690818\|ref\|XP_007043612.1\|	1.0e-24	47.18	Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 [Theo...	[more]
gi\|567909957\|ref\|XP_006447292.1\|	5.6e-23	43.57	hypothetical protein CICLE_v10016466mg [Citrus clementina]	[more]
gi\|567909955\|ref\|XP_006447291.1\|	5.6e-23	43.57	hypothetical protein CICLE_v10016466mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom
IPR015660	MASH1/Ascl1a-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C013627	MELO3C013627	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C013627T1	MELO3C013627T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C013627T1.cds1	MELO3C013627T1.cds1	CDS
MELO3C013627T1.cds2	MELO3C013627T1.cds2	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 1..58 score: 2.7
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 1..140 score: 1.1
None	No IPR available	unknown	Coil	Coil	coord: 29..56 scor
None	No IPR available	PANTHER	PTHR13935:SF53	BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN	coord: 1..140 score: 1.1