MELO3C008641T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGCTACAAATGGTGCTAGGATTATATTGGTTCTTTAGAGGCTACGTGCTTTAGTTTCTAGTGTTATGCAAGTGGTTTGGATTTACCTGTATTCTTAACTCTTTTTTTGTTTGATTTAGGTCTCCCAAAAAGATGTTTCCCCAAGAGATGAAGAGCAGCCCGTATCTCTGGTTCACTGTTTGAACCCTGTTTCAGATGATAAAGTTGATGGATGTCGAATGGGGTTATCTGATGATGAGAATGGAGATGTTAAAATCAAGGTTGACATACCCAACGGTTCTGATGCTTCAAGTGATATTGACATGGAAAGGTCTATGGAGCATACAGCTTCTGTGCTTCCATCGACTTCGTCTAATTTCGTGGAACCTTTAGGTTCCAAGCGTTTAAATGATATGGAAGAATTTACCACTCAAACTAAAAAGAGTCGAACTAATGGTGTACATAATGATGAAAGTTCCCCAATGGAGGAGCATTCTGCTTTGTTGAATACCATATGCAACACGGAAAAAAATGACTATGGTGCTGATTCTCATCCGTCAGCGTGTCCGAATGAGAAGATCCATTGTACTGCTTGTGATCAAGTGGTTATTAAAGTGTATGCACATCCTTTCCTGAGAGTAATTGTTTGTGCAGATTGCAAAAGCATGATGGATGACAAGAAGAATGTAAAG ATGAGGGCTACAAATGGTGCTAGGATTATATTGGTCTCCCAAAAAGATGTTTCCCCAAGAGATGAAGAGCAGCCCGTATCTCTGGTTCACTGTTTGAACCCTGTTTCAGATGATAAAGTTGATGGATGTCGAATGGGGTTATCTGATGATGAGAATGGAGATGTTAAAATCAAGGTTGACATACCCAACGGTTCTGATGCTTCAAGTGATATTGACATGGAAAGGTCTATGGAGCATACAGCTTCTGTGCTTCCATCGACTTCGTCTAATTTCGTGGAACCTTTAGGTTCCAAGCGTTTAAATGATATGGAAGAATTTACCACTCAAACTAAAAAGAGTCGAACTAATGGTGTACATAATGATGAAAGTTCCCCAATGGAGGAGCATTCTGCTTTGTTGAATACCATATGCAACACGGAAAAAAATGACTATGGTGCTGATTCTCATCCGTCAGCGTGTCCGAATGAGAAGATCCATTGTACTGCTTGTGATCAAGTGGTTATTAAAGTGTATGCACATCCTTTCCTGAGAGTAATTGTTTGTGCAGATTGCAAAAGCATGATGGATGACAAGAAGAATGTAAAG ATGAGGGCTACAAATGGTGCTAGGATTATATTGGTCTCCCAAAAAGATGTTTCCCCAAGAGATGAAGAGCAGCCCGTATCTCTGGTTCACTGTTTGAACCCTGTTTCAGATGATAAAGTTGATGGATGTCGAATGGGGTTATCTGATGATGAGAATGGAGATGTTAAAATCAAGGTTGACATACCCAACGGTTCTGATGCTTCAAGTGATATTGACATGGAAAGGTCTATGGAGCATACAGCTTCTGTGCTTCCATCGACTTCGTCTAATTTCGTGGAACCTTTAGGTTCCAAGCGTTTAAATGATATGGAAGAATTTACCACTCAAACTAAAAAGAGTCGAACTAATGGTGTACATAATGATGAAAGTTCCCCAATGGAGGAGCATTCTGCTTTGTTGAATACCATATGCAACACGGAAAAAAATGACTATGGTGCTGATTCTCATCCGTCAGCGTGTCCGAATGAGAAGATCCATTGTACTGCTTGTGATCAAGTGGTTATTAAAGTGTATGCACATCCTTTCCTGAGAGTAATTGTTTGTGCAGATTGCAAAAGCATGATGGATGACAAGAAGAATGTAAAG MRATNGARIILVSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDIDMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSALLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNVK
BLAST of MELO3C008641T1 vs. Swiss-Prot
Match: CHR20_ARATH (Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana GN=ATRX PE=2 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 3.9e-06 Identity = 29/87 (33.33%), Postives = 40/87 (45.98%), Query Frame = 1
BLAST of MELO3C008641T1 vs. TrEMBL
Match: A0A0A0LMU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G076520 PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 4.1e-95 Identity = 175/191 (91.62%), Postives = 178/191 (93.19%), Query Frame = 1
BLAST of MELO3C008641T1 vs. TrEMBL
Match: B9I5Q4_POPTR (SNF2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0013s04610g PE=4 SV=2) HSP 1 Score: 93.6 bits (231), Expect = 2.9e-16 Identity = 53/139 (38.13%), Postives = 79/139 (56.83%), Query Frame = 1
BLAST of MELO3C008641T1 vs. TrEMBL
Match: W9S6N2_9ROSA (Transcriptional regulator ATRX-like protein OS=Morus notabilis GN=L484_024481 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-14 Identity = 56/158 (35.44%), Postives = 88/158 (55.70%), Query Frame = 1
BLAST of MELO3C008641T1 vs. TrEMBL
Match: M5W6K1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000170mg PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.1e-14 Identity = 46/137 (33.58%), Postives = 84/137 (61.31%), Query Frame = 1
BLAST of MELO3C008641T1 vs. TrEMBL
Match: B9IPC3_POPTR (SNF2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0019s03810g PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.8e-14 Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 1
BLAST of MELO3C008641T1 vs. TAIR10
Match: AT1G08600.3 (AT1G08600.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 53.1 bits (126), Expect = 2.2e-07 Identity = 29/87 (33.33%), Postives = 40/87 (45.98%), Query Frame = 1
BLAST of MELO3C008641T1 vs. NCBI nr
Match: gi|659082333|ref|XP_008441784.1| (PREDICTED: transcriptional regulator ATRX isoform X2 [Cucumis melo]) HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of MELO3C008641T1 vs. NCBI nr
Match: gi|659082335|ref|XP_008441785.1| (PREDICTED: transcriptional regulator ATRX isoform X3 [Cucumis melo]) HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of MELO3C008641T1 vs. NCBI nr
Match: gi|659082337|ref|XP_008441786.1| (PREDICTED: transcriptional regulator ATRX isoform X4 [Cucumis melo]) HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of MELO3C008641T1 vs. NCBI nr
Match: gi|659082341|ref|XP_008441788.1| (PREDICTED: transcriptional regulator ATRX isoform X5 [Cucumis melo]) HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of MELO3C008641T1 vs. NCBI nr
Match: gi|659082329|ref|XP_008441780.1| (PREDICTED: transcriptional regulator ATRX isoform X1 [Cucumis melo]) HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
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