MELO3C008641 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008641
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTranscriptional regulator ATRX-like protein
Locationchr5 : 15954338 .. 15955012 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGCTACAAATGGTGCTAGGATTATATTGGTTCTTTAGAGGCTACGTGCTTTAGTTTCTAGTGTTATGCAAGTGGTTTGGATTTACCTGTATTCTTAACTCTTTTTTTGTTTGATTTAGGTCTCCCAAAAAGATGTTTCCCCAAGAGATGAAGAGCAGCCCGTATCTCTGGTTCACTGTTTGAACCCTGTTTCAGATGATAAAGTTGATGGATGTCGAATGGGGTTATCTGATGATGAGAATGGAGATGTTAAAATCAAGGTTGACATACCCAACGGTTCTGATGCTTCAAGTGATATTGACATGGAAAGGTCTATGGAGCATACAGCTTCTGTGCTTCCATCGACTTCGTCTAATTTCGTGGAACCTTTAGGTTCCAAGCGTTTAAATGATATGGAAGAATTTACCACTCAAACTAAAAAGAGTCGAACTAATGGTGTACATAATGATGAAAGTTCCCCAATGGAGGAGCATTCTGCTTTGTTGAATACCATATGCAACACGGAAAAAAATGACTATGGTGCTGATTCTCATCCGTCAGCGTGTCCGAATGAGAAGATCCATTGTACTGCTTGTGATCAAGTGGTTATTAAAGTGTATGCACATCCTTTCCTGAGAGTAATTGTTTGTGCAGATTGCAAAAGCATGATGGATGACAAGAAGAATGTAAAG

mRNA sequence

ATGAGGGCTACAAATGGTGCTAGGATTATATTGGTCTCCCAAAAAGATGTTTCCCCAAGAGATGAAGAGCAGCCCGTATCTCTGGTTCACTGTTTGAACCCTGTTTCAGATGATAAAGTTGATGGATGTCGAATGGGGTTATCTGATGATGAGAATGGAGATGTTAAAATCAAGGTTGACATACCCAACGGTTCTGATGCTTCAAGTGATATTGACATGGAAAGGTCTATGGAGCATACAGCTTCTGTGCTTCCATCGACTTCGTCTAATTTCGTGGAACCTTTAGGTTCCAAGCGTTTAAATGATATGGAAGAATTTACCACTCAAACTAAAAAGAGTCGAACTAATGGTGTACATAATGATGAAAGTTCCCCAATGGAGGAGCATTCTGCTTTGTTGAATACCATATGCAACACGGAAAAAAATGACTATGGTGCTGATTCTCATCCGTCAGCGTGTCCGAATGAGAAGATCCATTGTACTGCTTGTGATCAAGTGGTTATTAAAGTGTATGCACATCCTTTCCTGAGAGTAATTGTTTGTGCAGATTGCAAAAGCATGATGGATGACAAGAAGAATGTAAAG

Coding sequence (CDS)

ATGAGGGCTACAAATGGTGCTAGGATTATATTGGTCTCCCAAAAAGATGTTTCCCCAAGAGATGAAGAGCAGCCCGTATCTCTGGTTCACTGTTTGAACCCTGTTTCAGATGATAAAGTTGATGGATGTCGAATGGGGTTATCTGATGATGAGAATGGAGATGTTAAAATCAAGGTTGACATACCCAACGGTTCTGATGCTTCAAGTGATATTGACATGGAAAGGTCTATGGAGCATACAGCTTCTGTGCTTCCATCGACTTCGTCTAATTTCGTGGAACCTTTAGGTTCCAAGCGTTTAAATGATATGGAAGAATTTACCACTCAAACTAAAAAGAGTCGAACTAATGGTGTACATAATGATGAAAGTTCCCCAATGGAGGAGCATTCTGCTTTGTTGAATACCATATGCAACACGGAAAAAAATGACTATGGTGCTGATTCTCATCCGTCAGCGTGTCCGAATGAGAAGATCCATTGTACTGCTTGTGATCAAGTGGTTATTAAAGTGTATGCACATCCTTTCCTGAGAGTAATTGTTTGTGCAGATTGCAAAAGCATGATGGATGACAAGAAGAATGTAAAG

Protein sequence

MRATNGARIILVSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDIDMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSALLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNVK
Homology
[Close]
BLAST of MELO3C008641 vs. Swiss-Prot
Match: CHR20_ARATH (Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana GN=ATRX PE=2 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 3.9e-06
Identity = 29/87 (33.33%), Postives = 40/87 (45.98%), Query Frame = 1 

Query: 105 EFTTQTKKSRTNGVHNDESSPMEEHSALLNTICNTEKNDYGADSHPSACPNEKIHCTACD 164
           E +TQ   S  N   N   S  +      +T  N +     A    S  P     CTAC+
Sbjct: 434 ETSTQVHNSEVNIEENGNFSNSDVDKMTPSTHINVD-----AKRDDSQNPANNFRCTACN 493

Query: 165 QVVIKVYAHPFLRVIVCADCKSMMDDK 192
           +V ++V++HP L VIVC DCK  ++D+
Sbjct: 494 KVAVEVHSHPLLEVIVCMDCKRSIEDR 515

[Close]
BLAST of MELO3C008641 vs. TrEMBL
Match: A0A0A0LMU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G076520 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.1e-95
Identity = 175/191 (91.62%), Postives = 178/191 (93.19%), Query Frame = 1 

Query: 5   NGARIILVSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNG 64
           N  R   VSQKDVSPRDEEQPVSLV CLNPVSDDKVD CRMGLSDDENGDVKIKVDIPNG
Sbjct: 271 NQKRCKQVSQKDVSPRDEEQPVSLVDCLNPVSDDKVDKCRMGLSDDENGDVKIKVDIPNG 330

Query: 65  SDASSDIDMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESS 124
           SDASSDIDMERSMEHTASVLPS SSNFVEPLGSKRLNDMEE  TQTKKSRTNGVHNDE+S
Sbjct: 331 SDASSDIDMERSMEHTASVLPSASSNFVEPLGSKRLNDMEEVITQTKKSRTNGVHNDENS 390

Query: 125 PMEEHSALLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADC 184
           PM+EHSALLNTICNTE+NDY ADS PS CPNEKIHCTACDQVVIKVYAHPFLRVIVCADC
Sbjct: 391 PMKEHSALLNTICNTEQNDYDADSLPSTCPNEKIHCTACDQVVIKVYAHPFLRVIVCADC 450

Query: 185 KSMMDDKKNVK 196
           KSMMDDKKNVK
Sbjct: 451 KSMMDDKKNVK 461

[Close]
BLAST of MELO3C008641 vs. TrEMBL
Match: B9I5Q4_POPTR (SNF2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0013s04610g PE=4 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 2.9e-16
Identity = 53/139 (38.13%), Postives = 79/139 (56.83%), Query Frame = 1 

Query: 68  SSDIDMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPM- 127
           S D+DME+ M  + SV P + ++  EP  SKR N+ E+ +   KK RT  + +D  + + 
Sbjct: 303 SGDLDMEQLMSESNSVFPESDAS--EPRRSKRPNESEDLSINNKKIRTVIIDSDNEADIL 362

Query: 128 ----------EEHSALLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFL 187
                     E+ S LL  I      D  A  +PS   +EK  CTACD+V ++V++HP L
Sbjct: 363 EDKSVHGIKVEDQSTLLENI-----GDPSAGCNPSQGSSEKFQCTACDKVAVEVHSHPLL 422

Query: 188 RVIVCADCKSMMDDKKNVK 196
           +VIVC DCK +M++K +VK
Sbjct: 423 KVIVCKDCKFLMEEKMHVK 434

[Close]
BLAST of MELO3C008641 vs. TrEMBL
Match: W9S6N2_9ROSA (Transcriptional regulator ATRX-like protein OS=Morus notabilis GN=L484_024481 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-14
Identity = 56/158 (35.44%), Postives = 88/158 (55.70%), Query Frame = 1 

Query: 42  GCRMGLSDDENGDVKI---KVDIPNGSDASSDIDMERSMEHTASVLPSTS-SNFVEPLGS 101
           GC   + +D    +     K D P+G + +S++D   SM +   + P ++  +  EP GS
Sbjct: 361 GCSASVPNDNESGIACHNSKTDFPDGFE-TSNVDKGISMSNGTFLPPESALPDSNEPRGS 420

Query: 102 KRLNDMEEFTTQTKKSRTNGVHNDESSPME-EHSALLNTICNTEKNDYGADSHPSACPNE 161
           K   + EE   + K+SRT    ND+ S ++ E  A L         ++GAD+      NE
Sbjct: 421 KHKLETEEPDIENKRSRTVVRDNDDESTVKVEDQADLKE----NAGEFGADNL-----NE 480

Query: 162 KIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNV 195
           K HCTAC+++ +KV+ HP L+VIVCADCK++M++K  V
Sbjct: 481 KFHCTACNKIAVKVHPHPLLKVIVCADCKAIMEEKMRV 508

[Close]
BLAST of MELO3C008641 vs. TrEMBL
Match: M5W6K1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000170mg PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-14
Identity = 46/137 (33.58%), Postives = 84/137 (61.31%), Query Frame = 1 

Query: 66  DASSDIDMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSP 125
           + S+++D E  M + +S +P +S    E  GSKRLN+ EE     K+ RT  + +D+ +P
Sbjct: 442 ETSNNVDQESIMSNGSSPVPDSS----ESRGSKRLNEDEELNLDNKRGRTVIIDSDDDAP 501

Query: 126 MEEHSALLNTICNTEKNDYGADSH-------PSACPNEKIHCTACDQVVIKVYAHPFLRV 185
           +++ S   N I + ++++  A          PS   N+K++CTAC+++ ++V +HP L+V
Sbjct: 502 LKDISDC-NLIKSEDQSNADASISISATGGLPSHGLNKKVYCTACNKLAVEVRSHPLLKV 561

Query: 186 IVCADCKSMMDDKKNVK 196
           I+C DC+ ++D+K +VK
Sbjct: 562 IICTDCRCLLDEKMHVK 573

[Close]
BLAST of MELO3C008641 vs. TrEMBL
Match: B9IPC3_POPTR (SNF2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0019s03810g PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.8e-14
Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 1 

Query: 68  SSDIDMERSMEHTASVLPSTS-SNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPM 127
           S D+ ME S   + SV P ++  +  EP  SKR N+ E+ +   KK RT  + +D+ + +
Sbjct: 500 SVDLVMEHSTGKSNSVFPESALPDATEPRRSKRPNESEDLSINDKKIRTVIIDSDDEAGI 559

Query: 128 EEHSALLN------TICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIV 187
            E  ++ N      +       D   D +PS   NEK  CTACD+V ++ ++HP L+VIV
Sbjct: 560 LEDKSVHNIKVEDQSTLQENTGDPTTDCNPSQGSNEKFLCTACDKVAVEAHSHPLLKVIV 619

Query: 188 CADCKSMMDDKKNVK 196
           C DCK +M++K + K
Sbjct: 620 CKDCKFLMEEKMHAK 634

[Close]
BLAST of MELO3C008641 vs. TAIR10
Match: AT1G08600.3 (AT1G08600.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.2e-07
Identity = 29/87 (33.33%), Postives = 40/87 (45.98%), Query Frame = 1 

Query: 105 EFTTQTKKSRTNGVHNDESSPMEEHSALLNTICNTEKNDYGADSHPSACPNEKIHCTACD 164
           E +TQ   S  N   N   S  +      +T  N +     A    S  P     CTAC+
Sbjct: 434 ETSTQVHNSEVNIEENGNFSNSDVDKMTPSTHINVD-----AKRDDSQNPANNFRCTACN 493

Query: 165 QVVIKVYAHPFLRVIVCADCKSMMDDK 192
           +V ++V++HP L VIVC DCK  ++D+
Sbjct: 494 KVAVEVHSHPLLEVIVCMDCKRSIEDR 515

[Close]
BLAST of MELO3C008641 vs. NCBI nr
Match: gi|659082333|ref|XP_008441784.1| (PREDICTED: transcriptional regulator ATRX isoform X2 [Cucumis melo])

HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1 

Query: 12  VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI 71
           VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI
Sbjct: 337 VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI 396

Query: 72  DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA 131
           DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA
Sbjct: 397 DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA 456

Query: 132 LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK 191
           LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK
Sbjct: 457 LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK 516

Query: 192 KNVK 196
           KNVK
Sbjct: 517 KNVK 520

[Close]
BLAST of MELO3C008641 vs. NCBI nr
Match: gi|659082335|ref|XP_008441785.1| (PREDICTED: transcriptional regulator ATRX isoform X3 [Cucumis melo])

HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1 

Query: 12  VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI 71
           VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI
Sbjct: 333 VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI 392

Query: 72  DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA 131
           DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA
Sbjct: 393 DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA 452

Query: 132 LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK 191
           LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK
Sbjct: 453 LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK 512

Query: 192 KNVK 196
           KNVK
Sbjct: 513 KNVK 516

[Close]
BLAST of MELO3C008641 vs. NCBI nr
Match: gi|659082337|ref|XP_008441786.1| (PREDICTED: transcriptional regulator ATRX isoform X4 [Cucumis melo])

HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1 

Query: 12  VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI 71
           VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI
Sbjct: 245 VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI 304

Query: 72  DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA 131
           DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA
Sbjct: 305 DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA 364

Query: 132 LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK 191
           LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK
Sbjct: 365 LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK 424

Query: 192 KNVK 196
           KNVK
Sbjct: 425 KNVK 428

[Close]
BLAST of MELO3C008641 vs. NCBI nr
Match: gi|659082341|ref|XP_008441788.1| (PREDICTED: transcriptional regulator ATRX isoform X5 [Cucumis melo])

HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1 

Query: 12  VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI 71
           VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI
Sbjct: 236 VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI 295

Query: 72  DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA 131
           DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA
Sbjct: 296 DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA 355

Query: 132 LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK 191
           LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK
Sbjct: 356 LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK 415

Query: 192 KNVK 196
           KNVK
Sbjct: 416 KNVK 419

[Close]
BLAST of MELO3C008641 vs. NCBI nr
Match: gi|659082329|ref|XP_008441780.1| (PREDICTED: transcriptional regulator ATRX isoform X1 [Cucumis melo])

HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1 

Query: 12  VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI 71
           VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI
Sbjct: 343 VSQKDVSPRDEEQPVSLVHCLNPVSDDKVDGCRMGLSDDENGDVKIKVDIPNGSDASSDI 402

Query: 72  DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA 131
           DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA
Sbjct: 403 DMERSMEHTASVLPSTSSNFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSA 462

Query: 132 LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK 191
           LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK
Sbjct: 463 LLNTICNTEKNDYGADSHPSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDK 522

Query: 192 KNVK 196
           KNVK
Sbjct: 523 KNVK 526

The following BLAST results are available for this feature:
BLAST of MELO3C008641 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHR20_ARATH3.9e-0633.33Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana GN=ATRX PE=2 SV=2[more]
BLAST of MELO3C008641 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMU1_CUCSA4.1e-9591.62Uncharacterized protein OS=Cucumis sativus GN=Csa_2G076520 PE=4 SV=1[more]
B9I5Q4_POPTR2.9e-1638.13SNF2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0013s04610... [more]
W9S6N2_9ROSA1.2e-1435.44Transcriptional regulator ATRX-like protein OS=Morus notabilis GN=L484_024481 PE... [more]
M5W6K1_PRUPE2.1e-1433.58Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000170mg PE=4 SV=1[more]
B9IPC3_POPTR7.8e-1435.56SNF2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0019s03810... [more]
BLAST of MELO3C008641 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08600.32.2e-0733.33 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
BLAST of MELO3C008641 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082333|ref|XP_008441784.1|1.3e-102100.00PREDICTED: transcriptional regulator ATRX isoform X2 [Cucumis melo][more]
gi|659082335|ref|XP_008441785.1|1.3e-102100.00PREDICTED: transcriptional regulator ATRX isoform X3 [Cucumis melo][more]
gi|659082337|ref|XP_008441786.1|1.3e-102100.00PREDICTED: transcriptional regulator ATRX isoform X4 [Cucumis melo][more]
gi|659082341|ref|XP_008441788.1|1.3e-102100.00PREDICTED: transcriptional regulator ATRX isoform X5 [Cucumis melo][more]
gi|659082329|ref|XP_008441780.1|1.3e-102100.00PREDICTED: transcriptional regulator ATRX isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008641T1MELO3C008641T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008641Csa2G076520Cucumber (Chinese Long) v2cumeB137
MELO3C008641Cla007888Watermelon (97103) v1mewmB428
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008641Silver-seed gourdcarmeB0487
MELO3C008641Cucumber (Chinese Long) v3cucmeB144
MELO3C008641Watermelon (97103) v2mewmbB372
MELO3C008641Wax gourdmewgoB458
MELO3C008641Cucumber (Gy14) v1cgymeB321
MELO3C008641Cucurbita maxima (Rimu)cmameB178
MELO3C008641Cucurbita maxima (Rimu)cmameB739
MELO3C008641Cucurbita moschata (Rifu)cmomeB167
MELO3C008641Cucurbita moschata (Rifu)cmomeB726
MELO3C008641Wild cucumber (PI 183967)cpimeB142
MELO3C008641Watermelon (Charleston Gray)mewcgB369
MELO3C008641Cucurbita pepo (Zucchini)cpemeB106
MELO3C008641Cucurbita pepo (Zucchini)cpemeB780
MELO3C008641Bottle gourd (USVL1VR-Ls)lsimeB117
MELO3C008641Cucumber (Gy14) v2cgybmeB125