MELO3C008688T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008688T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Phytochromobilin:ferredoxin oxidoreductase
Location	chr5 : 17186446 .. 17191777 (+)
Sequence length	832

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACATTTCTTCCCTTTCTTTCTTTCTCAATCTCATCAATTTCTTCCCTCTCTTCTCTGATTAGTCGTCGTCCCCACCATCACAGCCATCTCTCATACCCAGCTCGTGCTCGTTCGTCGTCGTATTTCTTGTATCATTTAAAAAAAATCTTCATTCTCTCTCTTTGCATCTAACCATTAGGATCTGGCGCAAAATTTCATGTTCAATGGCATCGACGAGCTCGAAAGCAAAAGGTTTCTGAATTACTTTCCAGAGTTTCGCTGTGAACATGGTACAATCAACACGAAACGTAGTATGGCAGGAAAGTCTTACGAACATCGACCTTGGGATGAAAGAGGTGAATTTATTGGAGATACTATCAAAAGTTGATGTTAGTTCTCTGCCTTACTAATGTTTTTGGTTAAGTAAATTGATGTAGGTGTAACTTGTACGTTAGACTAAGTTTAGAGTTTGTTAAGTTATTTTTTGCACGCAAGTAGTTGGATGCACTGCCATTGAAGTGATCAATTTTTCAATGAGCCACAACAATTTTTGGTTTGTTCTCTGAGCTCATCCAATATTCAGATTTTATGTTTATTTTGCAGCATGTCTTTATGAACTATTGTTCTTTTAGTTGAATATATATATTGGTTCATTTTGAACTCTTTATTTTCTATCATTTTCATTTATCATCGTTTTGATCGTTATACTTTCAATTTTAAATGGACCTTTTAGAAGTAAGAGTGAGAAACAGCCAGTTCCATGAAAGACCACTCGTGGACATTTGAATTTGTAGGCTGTTTGAGCAGTTCAATACAAATACTTATCTGAAATTATACAAGTGGGAGTAAGATGGTGATGATTCAAGAATTGCTCTAATGGCTGTAGAAGCAAAGACAGAGCTTTGTAGAAATTTCTAAGAAGGCTACGAGATGGCAGAGTGTCGAGATTCTGAATGAAGGTAATTCTCCCTACTCCAGCCCTTATGCTTTTTTTGCCTCTTTCTGAATGAAGTTCCTGATGTGTCTTTTCAAAAGAAAAATAAAAGTGTTTAGAATATGACCTTATAAGAGACAGGAATTGAAAATCAAATTTGTTTCAGAAGTAAGGAAGATCAACTGGTTGATGGATAAACTTGACTTATAACTAGTCTTATGACTTAAGAAACCCATAAGAGAAAAAGGGGAAACAAATTAACAAACACAAGAATAGAAACCTTAAAAATCCCAGTGAAAAAGGACAAAATGGGGACAAACCATGCTTGTCTGGGACAAGAAGAGACATAATAGTGGCAACCCAGTTGGTAAATTTCACCGAAAAGTCACCTCTCTTAAGCTCAAAAATCCCGATCTCCCCCTTCTTCTCATACCCATTACCAAACCCAAAAACAGCTAAAGCAAGAACACAGGATAAAGCAAGGAAAAATTTAGCCCATATTTGCCCAAGAATGAAGAAATCTTGCCCTCCTCCATATCTGCTTCACTGGCCTTATAAAGAGAAGCATCAAAATGGAAGAACAAGAAGAAAAAAAAATAGTAAAATTGACAGACCCATGTGGCTGGAAAGAGACATTTGGATGCTGGTTTTGATTTAGAAAACAGAAAAGAGGAAATTTTATTATCATCAAATTGAATTTTGGATGAACCAATCATCAGTTGCAATGTAGTGGCCCTACTTTATTTTCTCCCTTTCAATGATCAACAAGTCAAATTGTGTCATTTTCCCTATGATTTTTCTTTAGTAAAAAGAGTTTTTAAATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTATCCTTTTTTTTTATTTTTATGGAATCATTACTTCAAACTCTTGAAGATTTCTAGGTTTATCTGTGATAGAGATTGGAATTGTTTGACACCACCTTATTTGATGAACTAACAAATGATGCAGTTACATTATTTACTAGTTTTGAAGTTCGTTTCAGAGGTGTAATTGACATAATTTTATTTAATATAAAAACTAAGTTTTTTTAAGGTCTCGAATGTGTCAAACTTGTTTAATTTAACATTAAATCGAATGATTGAAATTATTAAATATTTCTCTGAAAATTTAGAGAAATAAACACTAATTTAGAATATGACCTTATAAGAGACAGGAATTGAAAATCAAATTTGTTTCAGAAGTAAGGAAGATCAAGTGGTTGATGGATAAACTTGACTTAATAACTAGTCTTTTAGTTTTTCTAGAATAAAGTAACCGCCTTTGGAATCTTGCTTTTTTTAGTTTGCTTTCTTAGGTTACTTTTCTTGGTAACCATCCATGTTCTGTTGTTGACATTTCGAATTACAGTTCGTGATAGATTTTTTTGTTGCATAGTTGCATAAGCATGTTTTAGTTGATGGTAGATATGAAGTGTATTCTATAATTAGGTTGAAAATTATAGGTTGAAAATGACTCCTCTAAGTTTCTATTTTATTTTGTCTTACATTTCTTTCTTGATTTTCTTTGAGGATGATGCTTACCTATTACTATAGGTTAGTTGCATCTTTCCCAACCTTTGTTAATTTTTTTTAAAAAAAAAAAAGAAAAAGTCATCATCTATTTCCCACTGTGTGTTACTATCTTTTAATTGTTAGAAACAGTATTTAGTATTCTTGTCGATTGGAGCATAGATTAGTAGATAAGTCATCCATTACCATTACCATTCTAAATTTAAATCGTCGTCCAACCTTCCACCCCTTAAACTAAAGAAAAGTACTATTTATATTAAAGTTCTGTTAGCTTTTCTTCTATAGGTTAATATTTTTAAATGCCCTTTTAGATGGACTGAGGTGATGTCATGTCTTGCAAGCTGGCTTTCTCTATTTTTATTGAATACAATTTCTTGGATGGGATATGGTGTTACTAAAGCTTAATTTGACCACTTGATGGTTTCAAAAGTCACCCGAGTTTTTGCTTGGTGGTGGGAATATTTCCCTTTTTCTAAAAATTGAAATTTTGCAGATGCAGATCTGAGCTTTCTTTCTTTCTGCCATTTTTGTTTTTTTTAACTTTTTTTCTGCCATTTTGCAGATGCAGATGCCATTTCTGCCATTTCTTTCTTTCTGCCATTTCTTGGATGTTCATGAGTCATAATGTAGTTAATGATATGGGATGTTTAAGAATTCGCTTCAGTCATAAATTGGCTTTATGGTTGTATTTGTGTTTAAGGTTGTATGATCATTAACTATTATTGATCAATTGCAATATGTTTGTATCCAATTTATATACATGCAGTGCCCTCGTCAATTGGATTCTGTAGGGTGTGGGTACTACGTGCAAAAGTACATACATGAGATAGTGCATAATTCTAGTACTCCTATGACTAGCCTTGTAAGTTTCTACTTTCACTTTTTATATATGTTACAATTATGATCTAAACTCATACTTTCCATATCTTTCTCTTTGTCATAGTTCAATACCAAAAGTGCATATAGGCAAGAGGAGATTGACGAGATTCAAACCAAATGGG

mRNA sequence

AACATTTCTTCCCTTTCTTTCTTTCTCAATCTCATCAATTTCTTCCCTCTCTTCTCTGATTAGTCGTCGTCCCCACCATCACAGCCATCTCTCATACCCAGCTCGTGCTCGTTCGTCGTCGTATTTCTTGTATCATTTAAAAAAAATCTTCATTCTCTCTCTTTGCATCTAACCATTAGGATCTGGCGCAAAATTTCATGTTCAATGGCATCGACGAGCTCGAAAGCAAAAGGTTTCTGAATTACTTTCCAGAGTTTCGCTGTGAACATGGTACAATCAACACGAAACGTAGTATGGCAGGAAAGTCTTACGAACATCGACCTTGGGATGAAAGAGGTGTAACTTGTACGTTAGACTAAGTTTAGAGTTTGTTAAGTTATTTTTTGCACGCAAGTAGTTGGATGCACTGCCATTGAAGTGATCAATTTTTCAATGAGCCACAACAATTTTTGAAGTAAGAGTGAGAAACAGCCAGTTCCATGAAAGACCACTCGTGGACATTTGAATTTGTAGGCTGTTTGAGCAGTTCAATACAAATACTTATCTGAAATTATACAAGTGGGAGTAAGATGGTGATGATTCAAGAATTGCTCTAATGGCTGTAGAAGCAAAGACAGAGCTTTGTAGAAATTTCTAAGAAGGCTACGAGATGGCAGAGTGTCGAGATTCTGAATGAAGTGCCCTCGTCAATTGGATTCTGTAGGGTGTGGGTACTACGTGCAAAAGTACATACATGAGATAGTGCATAATTCTAGTACTCCTATGACTAGCCTTTTCAATACCAAAAGTGCATATAGGCAAGAGGAGATTGACGAGATTCAAACCAAATGGG

Coding sequence (CDS)

ATGTTCAATGGCATCGACGAGCTCGAAAGCAAAAGGTTTCTGAATTACTTTCCAGAGTTTCGCTGTGAACATGGTACAATCAACACGAAACGTAGTATGGCAGGAAAGTCTTACGAACATCGACCTTGGGATGAAAGAGGTGTAACTTGTACGTTAGACTAA

Protein sequence

MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD*

Homology

[Close]

BLAST of MELO3C008688T1 vs. Swiss-Prot
Match: PFBS_ARATH (Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thaliana GN=HY2 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.5e-11
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL +K F++YFPE++ E GT++ KRS+ GKSYE RPWD  G
Sbjct: 279 LFNGVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETRPWDLTG 325

[Close]

BLAST of MELO3C008688T1 vs. TrEMBL
Match: A0A0A0LXG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G616870 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.5e-15
Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +F+G+DEL SK+FL+YFPE+ CE GTINTKRSMAGKSYEHRPWDERG
Sbjct: 267 LFHGVDELGSKKFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDERG 313

[Close]

BLAST of MELO3C008688T1 vs. TrEMBL
Match: V4U5W4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015899mg PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.5e-12
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNGI EL SK+FL YFPE+ CE GT+N KRS+ GKS+EHRPWD RG
Sbjct: 277 LFNGIKELGSKKFLAYFPEYCCEDGTVNEKRSIIGKSFEHRPWDSRG 323

[Close]

BLAST of MELO3C008688T1 vs. TrEMBL
Match: G1EA20_POPBA (Heme oxygenase 2 protein 2 (Fragment) OS=Populus balsamifera GN=HY2.2 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.5e-12
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL SK FL+YFPE+RCE G++N KRS+ GKS+E+RPWD RG
Sbjct: 271 LFNGLDELGSKGFLDYFPEYRCEDGSVNEKRSILGKSFENRPWDARG 317

[Close]

BLAST of MELO3C008688T1 vs. TrEMBL
Match: G1EA29_POPBA (Heme oxygenase 2 protein 2 (Fragment) OS=Populus balsamifera GN=HY2.2 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.5e-12
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL SK FL+YFPE+RCE G++N KRS+ GKS+E+RPWD RG
Sbjct: 271 LFNGLDELGSKGFLDYFPEYRCEDGSVNEKRSILGKSFENRPWDARG 317

[Close]

BLAST of MELO3C008688T1 vs. TrEMBL
Match: B9GIF8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s26050g PE=4 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 3.5e-12
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL SK FL+YFPE+RCE G++N KRS+ GKS+E+RPWD RG
Sbjct: 283 LFNGLDELGSKGFLDYFPEYRCEDGSVNEKRSILGKSFENRPWDARG 329

[Close]

BLAST of MELO3C008688T1 vs. TAIR10
Match: AT3G09150.2 (AT3G09150.2 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2))

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-12
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL +K F++YFPE++ E GT++ KRS+ GKSYE RPWD  G
Sbjct: 279 LFNGVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETRPWDLTG 325

[Close]

BLAST of MELO3C008688T1 vs. NCBI nr
Match: gi|659098972|ref|XP_008450371.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis melo])

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-16
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNGIDEL SK FL+YFPE+RCE GTINTKRSMAGKSYEHRPWDERG
Sbjct: 267 LFNGIDELGSKSFLDYFPEYRCEDGTINTKRSMAGKSYEHRPWDERG 313

[Close]

BLAST of MELO3C008688T1 vs. NCBI nr
Match: gi|449442567|ref|XP_004139053.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-15
Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +F+G+DEL SK+FL+YFPE+ CE GTINTKRSMAGKSYEHRPWDERG
Sbjct: 267 LFHGVDELGSKKFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDERG 313

[Close]

BLAST of MELO3C008688T1 vs. NCBI nr
Match: gi|568833045|ref|XP_006470728.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic isoform X1 [Citrus sinensis])

HSP 1 Score: 79.3 bits (194), Expect = 2.2e-12
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNGI EL SK+FL+YFPE+ CE GT+N KRS+ GKS+EHRPWD RG
Sbjct: 277 LFNGIKELGSKKFLDYFPEYCCEDGTVNEKRSIIGKSFEHRPWDSRG 323

[Close]

BLAST of MELO3C008688T1 vs. NCBI nr
Match: gi|339778197|gb|AEK05980.1| (heme oxygenase 2 protein 2, partial [Populus balsamifera])

HSP 1 Score: 78.2 bits (191), Expect = 5.0e-12
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL SK FL+YFPE+RCE G++N KRS+ GKS+E+RPWD RG
Sbjct: 271 LFNGLDELGSKGFLDYFPEYRCEDGSVNEKRSILGKSFENRPWDARG 317

[Close]

BLAST of MELO3C008688T1 vs. NCBI nr
Match: gi|566151056|ref|XP_002298303.2| (hypothetical protein POPTR_0001s26050g [Populus trichocarpa])

HSP 1 Score: 78.2 bits (191), Expect = 5.0e-12
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1


Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL SK FL+YFPE+RCE G++N KRS+ GKS+E+RPWD RG
Sbjct: 283 LFNGLDELGSKGFLDYFPEYRCEDGSVNEKRSILGKSFENRPWDARG 329

The following BLAST results are available for this feature:

BLAST of MELO3C008688T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PFBS_ARATH	2.5e-11	59.57	Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of MELO3C008688T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXG3_CUCSA	1.5e-15	80.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G616870 PE=4 SV=1	[more]
V4U5W4_9ROSI	3.5e-12	70.21	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015899mg PE=4 SV=1	[more]
G1EA20_POPBA	3.5e-12	68.09	Heme oxygenase 2 protein 2 (Fragment) OS=Populus balsamifera GN=HY2.2 PE=4 SV=1	[more]
G1EA29_POPBA	3.5e-12	68.09	Heme oxygenase 2 protein 2 (Fragment) OS=Populus balsamifera GN=HY2.2 PE=4 SV=1	[more]
B9GIF8_POPTR	3.5e-12	68.09	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s26050g PE=4 SV=2	[more]

BLAST of MELO3C008688T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G09150.2	1.4e-12	59.57	phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochrom...	[more]

BLAST of MELO3C008688T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098972\|ref\|XP_008450371.1\|	1.1e-16	87.23	PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis me...	[more]
gi\|449442567\|ref\|XP_004139053.1\|	2.2e-15	80.85	PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis sa...	[more]
gi\|568833045\|ref\|XP_006470728.1\|	2.2e-12	70.21	PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic isoform X1 ...	[more]
gi\|339778197\|gb\|AEK05980.1\|	5.0e-12	68.09	heme oxygenase 2 protein 2, partial [Populus balsamifera]	[more]
gi\|566151056\|ref\|XP_002298303.2\|	5.0e-12	68.09	hypothetical protein POPTR_0001s26050g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010024	phytochromobilin biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C008688	MELO3C008688	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C008688T1	MELO3C008688T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C008688T1.cds1	MELO3C008688T1.cds1	CDS
MELO3C008688T1.cds2	MELO3C008688T1.cds2	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34557	FAMILY NOT NAMED	coord: 1..47 score: 6.0
None	No IPR available	PANTHER	PTHR34557:SF1	PHYTOCHROMOBILIN:FERREDOXIN OXIDOREDUCTASE, CHLOROPLASTIC	coord: 1..47 score: 6.0