MELO3C008688 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008688
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPhytochromobilin:ferredoxin oxidoreductase
Locationchr5 : 17186446 .. 17191777 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACATTTCTTCCCTTTCTTTCTTTCTCAATCTCATCAATTTCTTCCCTCTCTTCTCTGATTAGTCGTCGTCCCCACCATCACAGCCATCTCTCATACCCAGCTCGTGCTCGTTCGTCGTCGTATTTCTTGTATCATTTAAAAAAAATCTTCATTCTCTCTCTTTGCATCTAACCATTAGGATCTGGCGCAAAATTTCATGTTCAATGGCATCGACGAGCTCGAAAGCAAAAGGTTTCTGAATTACTTTCCAGAGTTTCGCTGTGAACATGGTACAATCAACACGAAACGTAGTATGGCAGGAAAGTCTTACGAACATCGACCTTGGGATGAAAGAGGTGAATTTATTGGAGATACTATCAAAAGTTGATGTTAGTTCTCTGCCTTACTAATGTTTTTGGTTAAGTAAATTGATGTAGGTGTAACTTGTACGTTAGACTAAGTTTAGAGTTTGTTAAGTTATTTTTTGCACGCAAGTAGTTGGATGCACTGCCATTGAAGTGATCAATTTTTCAATGAGCCACAACAATTTTTGGTTTGTTCTCTGAGCTCATCCAATATTCAGATTTTATGTTTATTTTGCAGCATGTCTTTATGAACTATTGTTCTTTTAGTTGAATATATATATTGGTTCATTTTGAACTCTTTATTTTCTATCATTTTCATTTATCATCGTTTTGATCGTTATACTTTCAATTTTAAATGGACCTTTTAGAAGTAAGAGTGAGAAACAGCCAGTTCCATGAAAGACCACTCGTGGACATTTGAATTTGTAGGCTGTTTGAGCAGTTCAATACAAATACTTATCTGAAATTATACAAGTGGGAGTAAGATGGTGATGATTCAAGAATTGCTCTAATGGCTGTAGAAGCAAAGACAGAGCTTTGTAGAAATTTCTAAGAAGGCTACGAGATGGCAGAGTGTCGAGATTCTGAATGAAGGTAATTCTCCCTACTCCAGCCCTTATGCTTTTTTTGCCTCTTTCTGAATGAAGTTCCTGATGTGTCTTTTCAAAAGAAAAATAAAAGTGTTTAGAATATGACCTTATAAGAGACAGGAATTGAAAATCAAATTTGTTTCAGAAGTAAGGAAGATCAACTGGTTGATGGATAAACTTGACTTATAACTAGTCTTATGACTTAAGAAACCCATAAGAGAAAAAGGGGAAACAAATTAACAAACACAAGAATAGAAACCTTAAAAATCCCAGTGAAAAAGGACAAAATGGGGACAAACCATGCTTGTCTGGGACAAGAAGAGACATAATAGTGGCAACCCAGTTGGTAAATTTCACCGAAAAGTCACCTCTCTTAAGCTCAAAAATCCCGATCTCCCCCTTCTTCTCATACCCATTACCAAACCCAAAAACAGCTAAAGCAAGAACACAGGATAAAGCAAGGAAAAATTTAGCCCATATTTGCCCAAGAATGAAGAAATCTTGCCCTCCTCCATATCTGCTTCACTGGCCTTATAAAGAGAAGCATCAAAATGGAAGAACAAGAAGAAAAAAAAATAGTAAAATTGACAGACCCATGTGGCTGGAAAGAGACATTTGGATGCTGGTTTTGATTTAGAAAACAGAAAAGAGGAAATTTTATTATCATCAAATTGAATTTTGGATGAACCAATCATCAGTTGCAATGTAGTGGCCCTACTTTATTTTCTCCCTTTCAATGATCAACAAGTCAAATTGTGTCATTTTCCCTATGATTTTTCTTTAGTAAAAAGAGTTTTTAAATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTATCCTTTTTTTTTATTTTTATGGAATCATTACTTCAAACTCTTGAAGATTTCTAGGTTTATCTGTGATAGAGATTGGAATTGTTTGACACCACCTTATTTGATGAACTAACAAATGATGCAGTTACATTATTTACTAGTTTTGAAGTTCGTTTCAGAGGTGTAATTGACATAATTTTATTTAATATAAAAACTAAGTTTTTTTAAGGTCTCGAATGTGTCAAACTTGTTTAATTTAACATTAAATCGAATGATTGAAATTATTAAATATTTCTCTGAAAATTTAGAGAAATAAACACTAATTTAGAATATGACCTTATAAGAGACAGGAATTGAAAATCAAATTTGTTTCAGAAGTAAGGAAGATCAAGTGGTTGATGGATAAACTTGACTTAATAACTAGTCTTTTAGTTTTTCTAGAATAAAGTAACCGCCTTTGGAATCTTGCTTTTTTTAGTTTGCTTTCTTAGGTTACTTTTCTTGGTAACCATCCATGTTCTGTTGTTGACATTTCGAATTACAGTTCGTGATAGATTTTTTTGTTGCATAGTTGCATAAGCATGTTTTAGTTGATGGTAGATATGAAGTGTATTCTATAATTAGGTTGAAAATTATAGGTTGAAAATGACTCCTCTAAGTTTCTATTTTATTTTGTCTTACATTTCTTTCTTGATTTTCTTTGAGGATGATGCTTACCTATTACTATAGGTTAGTTGCATCTTTCCCAACCTTTGTTAATTTTTTTTAAAAAAAAAAAAGAAAAAGTCATCATCTATTTCCCACTGTGTGTTACTATCTTTTAATTGTTAGAAACAGTATTTAGTATTCTTGTCGATTGGAGCATAGATTAGTAGATAAGTCATCCATTACCATTACCATTCTAAATTTAAATCGTCGTCCAACCTTCCACCCCTTAAACTAAAGAAAAGTACTATTTATATTAAAGTTCTGTTAGCTTTTCTTCTATAGGTTAATATTTTTAAATGCCCTTTTAGATGGACTGAGGTGATGTCATGTCTTGCAAGCTGGCTTTCTCTATTTTTATTGAATACAATTTCTTGGATGGGATATGGTGTTACTAAAGCTTAATTTGACCACTTGATGGTTTCAAAAGTCACCCGAGTTTTTGCTTGGTGGTGGGAATATTTCCCTTTTTCTAAAAATTGAAATTTTGCAGATGCAGATCTGAGCTTTCTTTCTTTCTGCCATTTTTGTTTTTTTTAACTTTTTTTCTGCCATTTTGCAGATGCAGATGCCATTTCTGCCATTTCTTTCTTTCTGCCATTTCTTGGATGTTCATGAGTCATAATGTAGTTAATGATATGGGATGTTTAAGAATTCGCTTCAGTCATAAATTGGCTTTATGGTTGTATTTGTGTTTAAGGTTGTATGATCATTAACTATTATTGATCAATTGCAATATGTTTGTATCCAATTTATATACATGCAGTGCCCTCGTCAATTGGATTCTGTAGGGTGTGGGTACTACGTGCAAAAGTACATACATGAGATAGTGCATAATTCTAGTACTCCTATGACTAGCCTTGTAAGTTTCTACTTTCACTTTTTATATATGTTACAATTATGATCTAAACTCATACTTTCCATATCTTTCTCTTTGTCATAGTTCAATACCAAAAGTGCATATAGGCAAGAGGAGATTGACGAGATTCAAACCAAATGGG

mRNA sequence

AACATTTCTTCCCTTTCTTTCTTTCTCAATCTCATCAATTTCTTCCCTCTCTTCTCTGATTAGTCGTCGTCCCCACCATCACAGCCATCTCTCATACCCAGCTCGTGCTCGTTCGTCGTCGTATTTCTTGTATCATTTAAAAAAAATCTTCATTCTCTCTCTTTGCATCTAACCATTAGGATCTGGCGCAAAATTTCATGTTCAATGGCATCGACGAGCTCGAAAGCAAAAGGTTTCTGAATTACTTTCCAGAGTTTCGCTGTGAACATGGTACAATCAACACGAAACGTAGTATGGCAGGAAAGTCTTACGAACATCGACCTTGGGATGAAAGAGGTGTAACTTGTACGTTAGACTAAGTTTAGAGTTTGTTAAGTTATTTTTTGCACGCAAGTAGTTGGATGCACTGCCATTGAAGTGATCAATTTTTCAATGAGCCACAACAATTTTTGAAGTAAGAGTGAGAAACAGCCAGTTCCATGAAAGACCACTCGTGGACATTTGAATTTGTAGGCTGTTTGAGCAGTTCAATACAAATACTTATCTGAAATTATACAAGTGGGAGTAAGATGGTGATGATTCAAGAATTGCTCTAATGGCTGTAGAAGCAAAGACAGAGCTTTGTAGAAATTTCTAAGAAGGCTACGAGATGGCAGAGTGTCGAGATTCTGAATGAAGTGCCCTCGTCAATTGGATTCTGTAGGGTGTGGGTACTACGTGCAAAAGTACATACATGAGATAGTGCATAATTCTAGTACTCCTATGACTAGCCTTTTCAATACCAAAAGTGCATATAGGCAAGAGGAGATTGACGAGATTCAAACCAAATGGG

Coding sequence (CDS)

ATGTTCAATGGCATCGACGAGCTCGAAAGCAAAAGGTTTCTGAATTACTTTCCAGAGTTTCGCTGTGAACATGGTACAATCAACACGAAACGTAGTATGGCAGGAAAGTCTTACGAACATCGACCTTGGGATGAAAGAGGTGTAACTTGTACGTTAGACTAA

Protein sequence

MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD*
Homology
[Close]
BLAST of MELO3C008688 vs. Swiss-Prot
Match: PFBS_ARATH (Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thaliana GN=HY2 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.5e-11
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL +K F++YFPE++ E GT++ KRS+ GKSYE RPWD  G
Sbjct: 279 LFNGVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETRPWDLTG 325

[Close]
BLAST of MELO3C008688 vs. TrEMBL
Match: A0A0A0LXG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G616870 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.5e-15
Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +F+G+DEL SK+FL+YFPE+ CE GTINTKRSMAGKSYEHRPWDERG
Sbjct: 267 LFHGVDELGSKKFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDERG 313

[Close]
BLAST of MELO3C008688 vs. TrEMBL
Match: V4U5W4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015899mg PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.5e-12
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNGI EL SK+FL YFPE+ CE GT+N KRS+ GKS+EHRPWD RG
Sbjct: 277 LFNGIKELGSKKFLAYFPEYCCEDGTVNEKRSIIGKSFEHRPWDSRG 323

[Close]
BLAST of MELO3C008688 vs. TrEMBL
Match: G1EA20_POPBA (Heme oxygenase 2 protein 2 (Fragment) OS=Populus balsamifera GN=HY2.2 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.5e-12
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL SK FL+YFPE+RCE G++N KRS+ GKS+E+RPWD RG
Sbjct: 271 LFNGLDELGSKGFLDYFPEYRCEDGSVNEKRSILGKSFENRPWDARG 317

[Close]
BLAST of MELO3C008688 vs. TrEMBL
Match: G1EA29_POPBA (Heme oxygenase 2 protein 2 (Fragment) OS=Populus balsamifera GN=HY2.2 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.5e-12
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL SK FL+YFPE+RCE G++N KRS+ GKS+E+RPWD RG
Sbjct: 271 LFNGLDELGSKGFLDYFPEYRCEDGSVNEKRSILGKSFENRPWDARG 317

[Close]
BLAST of MELO3C008688 vs. TrEMBL
Match: B9GIF8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s26050g PE=4 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 3.5e-12
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL SK FL+YFPE+RCE G++N KRS+ GKS+E+RPWD RG
Sbjct: 283 LFNGLDELGSKGFLDYFPEYRCEDGSVNEKRSILGKSFENRPWDARG 329

[Close]
BLAST of MELO3C008688 vs. TAIR10
Match: AT3G09150.2 (AT3G09150.2 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2))

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-12
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL +K F++YFPE++ E GT++ KRS+ GKSYE RPWD  G
Sbjct: 279 LFNGVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETRPWDLTG 325

[Close]
BLAST of MELO3C008688 vs. NCBI nr
Match: gi|659098972|ref|XP_008450371.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis melo])

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-16
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNGIDEL SK FL+YFPE+RCE GTINTKRSMAGKSYEHRPWDERG
Sbjct: 267 LFNGIDELGSKSFLDYFPEYRCEDGTINTKRSMAGKSYEHRPWDERG 313

[Close]
BLAST of MELO3C008688 vs. NCBI nr
Match: gi|449442567|ref|XP_004139053.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-15
Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +F+G+DEL SK+FL+YFPE+ CE GTINTKRSMAGKSYEHRPWDERG
Sbjct: 267 LFHGVDELGSKKFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDERG 313

[Close]
BLAST of MELO3C008688 vs. NCBI nr
Match: gi|568833045|ref|XP_006470728.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic isoform X1 [Citrus sinensis])

HSP 1 Score: 79.3 bits (194), Expect = 2.2e-12
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNGI EL SK+FL+YFPE+ CE GT+N KRS+ GKS+EHRPWD RG
Sbjct: 277 LFNGIKELGSKKFLDYFPEYCCEDGTVNEKRSIIGKSFEHRPWDSRG 323

[Close]
BLAST of MELO3C008688 vs. NCBI nr
Match: gi|339778197|gb|AEK05980.1| (heme oxygenase 2 protein 2, partial [Populus balsamifera])

HSP 1 Score: 78.2 bits (191), Expect = 5.0e-12
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL SK FL+YFPE+RCE G++N KRS+ GKS+E+RPWD RG
Sbjct: 271 LFNGLDELGSKGFLDYFPEYRCEDGSVNEKRSILGKSFENRPWDARG 317

[Close]
BLAST of MELO3C008688 vs. NCBI nr
Match: gi|566151056|ref|XP_002298303.2| (hypothetical protein POPTR_0001s26050g [Populus trichocarpa])

HSP 1 Score: 78.2 bits (191), Expect = 5.0e-12
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1 

Query: 1   MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG 48
           +FNG+DEL SK FL+YFPE+RCE G++N KRS+ GKS+E+RPWD RG
Sbjct: 283 LFNGLDELGSKGFLDYFPEYRCEDGSVNEKRSILGKSFENRPWDARG 329

The following BLAST results are available for this feature:
BLAST of MELO3C008688 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PFBS_ARATH2.5e-1159.57Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thalian... [more]
BLAST of MELO3C008688 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXG3_CUCSA1.5e-1580.85Uncharacterized protein OS=Cucumis sativus GN=Csa_1G616870 PE=4 SV=1[more]
V4U5W4_9ROSI3.5e-1270.21Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015899mg PE=4 SV=1[more]
G1EA20_POPBA3.5e-1268.09Heme oxygenase 2 protein 2 (Fragment) OS=Populus balsamifera GN=HY2.2 PE=4 SV=1[more]
G1EA29_POPBA3.5e-1268.09Heme oxygenase 2 protein 2 (Fragment) OS=Populus balsamifera GN=HY2.2 PE=4 SV=1[more]
B9GIF8_POPTR3.5e-1268.09Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s26050g PE=4 SV=2[more]
BLAST of MELO3C008688 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G09150.21.4e-1259.57 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochrom... [more]
BLAST of MELO3C008688 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659098972|ref|XP_008450371.1|1.1e-1687.23PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis me... [more]
gi|449442567|ref|XP_004139053.1|2.2e-1580.85PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis sa... [more]
gi|568833045|ref|XP_006470728.1|2.2e-1270.21PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic isoform X1 ... [more]
gi|339778197|gb|AEK05980.1|5.0e-1268.09heme oxygenase 2 protein 2, partial [Populus balsamifera][more]
gi|566151056|ref|XP_002298303.2|5.0e-1268.09hypothetical protein POPTR_0001s26050g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010024 phytochromobilin biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU55324melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008688T1MELO3C008688T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU55324MU55324transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34557FAMILY NOT NAMEDcoord: 1..47
score: 6.0
NoneNo IPR availablePANTHERPTHR34557:SF1PHYTOCHROMOBILIN:FERREDOXIN OXIDOREDUCTASE, CHLOROPLASTICcoord: 1..47
score: 6.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008688Cucumber (Gy14) v1cgymeB320
MELO3C008688Cucurbita maxima (Rimu)cmameB175
MELO3C008688Cucurbita maxima (Rimu)cmameB737
MELO3C008688Cucurbita moschata (Rifu)cmomeB164
MELO3C008688Cucurbita moschata (Rifu)cmomeB725
MELO3C008688Wild cucumber (PI 183967)cpimeB136
MELO3C008688Cucumber (Chinese Long) v2cumeB142
MELO3C008688Watermelon (Charleston Gray)mewcgB367
MELO3C008688Bottle gourd (USVL1VR-Ls)lsimeB115
MELO3C008688Cucumber (Gy14) v2cgybmeB117
MELO3C008688Cucumber (Chinese Long) v3cucmeB138
MELO3C008688Cucumber (Chinese Long) v3cucmeB141
MELO3C008688Watermelon (97103) v2mewmbB369