Cla002861 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCAACGAAGGATGATCAATTTCCCATGTTTGAGGAGAAGGTAAAACGGACTGTCTATGTTGATAATCTCTCTCCCCAAGTAACTGAGCCTGTTTTGAGAACTGCTTTAGATCAGTTTGGGACTGTTGTCAGTGTCCATTTTATCCCAAACTACACAGAGCCAATTAATAGCTCTCAATGTGCTCTAGTAGAGATGAAGGATTTGAAGGAGGCGAAATCTGTTATCTCCGTGATATCTCAGTTCCCTTTCATGATGTCTGGAATGCCAAGACCGGTGAGGGCGCGCCCTGCCGAAGTGGAAATGTTTGATGATCGCCCTGTAAAGTCTCAGTTCCCTTTCATGATTTCCGGAATGCCGAGACCGGTGAGGGCGCGCCCTGCCGAAGTGGAAATGTTTGATGATCGCCCTGTAAAGCCTGGTAGGAAGATTAGCTTTAGCTGGCTGGAAAAGGATGATCCTGATTTTGAAGTGGCCAAGAAAATTAAGCTTCTTACTCAGAAACATGTGGCTGAAGTTACATTCTTGCTGAAGGCATGAGTTTCAAAATCCCATCTCTCAACACCCCCCAAACCAAAAATAAAATAGAAATAAAAATAAAAATAAAAATAAAAATAAAAATCTATTATGGTTGTTCTTATTTAGTGCTTGAATTTTAAAAAGTTTGAATTATATATCTGAACTTTGAATTGTGATTCTTAGACGATGTGAGATATTTAGTAGACGAACGTTAGTTAATTTAGCACAATGTGGCATAGGTGACAAAAGAAAGAGGCTAGTTAGCAACATGCCTTGTAGATTGTTATCACTCTGTTTTGTTTAGCTATCCTCTCTCTCGTCTTCCATTTTTGTGCCACATTGTGCTAAATCAATCCATTAGCATTTGTTTATCTGATAAGAGTATTGGAATCATAATTGAAAGTTTGTGTATGTAATTAGAACCTTTTAAAATTAAATAAACACAACCATTAACGTTTGGACTATATTTTGAATGTGGTCAAATTATAAGTTGGGTCCCACAACTTTGAGATTTTCTCGTGATTGTTTAGTTCATTTACTTTTAAATCTCTCTAGTAGGTCTCCTCAACTTTCCAGTTGTGTCTGTTTAACCCTTATACTTTAAAAGAATATAATAGCTTTCTAGCTTTTAGGTTGGGTCTATTTAACCCTCATTTTTATAAAAAAGGGTAATTGTAAAGGGAATATTTTTAGGGTTGATAATCAAGTGTATAGCAACATTTTTAAAGAATTGCAAATATAACAAAATCTATTGATGATAGGCTCTATCGTTGATGTACCTATTAGTGGTAGACTTTGATAGCTGAATTTAAATTTTGATATATGTGCAAATTCTTTGTGCTATATCTGTTAATACTTTGAGCTTGGTTGCTATTTTTGCAACTGTCCTTTTAATATACTTGAAATCAACCCATTTGTGTATCGCTCAAGTAAGTGTTAAGGTGGTGGAGTTAACTATGAGATCTATTAGGCACAAAGTTAAAAAGTTAGACACATTTTGAAGTACAAAGATTAAGTAGATACGATCTTGAAAGATTAAGTAGATACGATCTTGATCTTGAAAGCCTTGAATCTATTAGAAATCCTTTGAAATATAGGAATAAGTAAACACAACTCTAAAAGTTTAGGGATCATATTGGTAATTTGGGCTAACATAGATTCCTCCAATTCCTCTGCAGCACCATTTGGCGGAAGAGGAGAAGCTTGCAAAGCAGCAACAAGAAGCACTGAAAGGAAACTACAAGAAATATGAGATTGTAGAAAGTGTAATGGCTGATGGAACTGCCCGCAGGTTAGCAAAACATTATAATATGCGAGTTTCAGATGATTAA ATGGGATCAACGAAGGATGATCAATTTCCCATGTTTGAGGAGAAGGTAAAACGGACTGTCTATGTTGATAATCTCTCTCCCCAAGTAACTGAGCCTGTTTTGAGAACTGCTTTAGATCAGTTTGGGACTGTTGTCAGTGTCCATTTTATCCCAAACTACACAGAGCCAATTAATAGCTCTCAATGTGCTCTAGTAGAGATGAAGGATTTGAAGGAGGCGAAATCTGTTATCTCCGTGATATCTCAGTTCCCTTTCATGATGTCTGGAATGCCAAGACCGGTGAGGGCGCGCCCTGCCGAAGTGGAAATGTTTGATGATCGCCCTGTAAAGTCTCAGTTCCCTTTCATGATTTCCGGAATGCCGAGACCGGTGAGGGCGCGCCCTGCCGAAGTGGAAATGTTTGATGATCGCCCTGTAAAGCCTGGTAGGAAGATTAGCTTTAGCTGGCTGGAAAAGGATGATCCTGATTTTGAAGTGGCCAAGAAAATTAAGCTTCTTACTCAGAAACATGTGGCTGAACACCATTTGGCGGAAGAGGAGAAGCTTGCAAAGCAGCAACAAGAAGCACTGAAAGGAAACTACAAGAAATATGAGATTGTAGAAAGTGTAATGGCTGATGGAACTGCCCGCAGGTTAGCAAAACATTATAATATGCGAGTTTCAGATGATTAA ATGGGATCAACGAAGGATGATCAATTTCCCATGTTTGAGGAGAAGGTAAAACGGACTGTCTATGTTGATAATCTCTCTCCCCAAGTAACTGAGCCTGTTTTGAGAACTGCTTTAGATCAGTTTGGGACTGTTGTCAGTGTCCATTTTATCCCAAACTACACAGAGCCAATTAATAGCTCTCAATGTGCTCTAGTAGAGATGAAGGATTTGAAGGAGGCGAAATCTGTTATCTCCGTGATATCTCAGTTCCCTTTCATGATGTCTGGAATGCCAAGACCGGTGAGGGCGCGCCCTGCCGAAGTGGAAATGTTTGATGATCGCCCTGTAAAGTCTCAGTTCCCTTTCATGATTTCCGGAATGCCGAGACCGGTGAGGGCGCGCCCTGCCGAAGTGGAAATGTTTGATGATCGCCCTGTAAAGCCTGGTAGGAAGATTAGCTTTAGCTGGCTGGAAAAGGATGATCCTGATTTTGAAGTGGCCAAGAAAATTAAGCTTCTTACTCAGAAACATGTGGCTGAACACCATTTGGCGGAAGAGGAGAAGCTTGCAAAGCAGCAACAAGAAGCACTGAAAGGAAACTACAAGAAATATGAGATTGTAGAAAGTGTAATGGCTGATGGAACTGCCCGCAGGTTAGCAAAACATTATAATATGCGAGTTTCAGATGATTAA MGSTKDDQFPMFEEKVKRTVYVDNLSPQVTEPVLRTALDQFGTVVSVHFIPNYTEPINSSQCALVEMKDLKEAKSVISVISQFPFMMSGMPRPVRARPAEVEMFDDRPVKSQFPFMISGMPRPVRARPAEVEMFDDRPVKPGRKISFSWLEKDDPDFEVAKKIKLLTQKHVAEHHLAEEEKLAKQQQEALKGNYKKYEIVESVMADGTARRLAKHYNMRVSDD
BLAST of Cla002861 vs. TrEMBL
Match: A0A0A0KAE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013320 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 1.6e-87 Identity = 174/229 (75.98%), Postives = 184/229 (80.35%), Query Frame = 1
BLAST of Cla002861 vs. TrEMBL
Match: D7SWK8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g03120 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.5e-64 Identity = 129/229 (56.33%), Postives = 160/229 (69.87%), Query Frame = 1
BLAST of Cla002861 vs. TrEMBL
Match: A0A061EIN5_THECC (RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_020046 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.5e-64 Identity = 134/229 (58.52%), Postives = 159/229 (69.43%), Query Frame = 1
BLAST of Cla002861 vs. TrEMBL
Match: A0A067L601_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20842 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 8.8e-62 Identity = 128/229 (55.90%), Postives = 154/229 (67.25%), Query Frame = 1
BLAST of Cla002861 vs. TrEMBL
Match: A0A0D2UT21_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G142700 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 1.5e-61 Identity = 131/229 (57.21%), Postives = 154/229 (67.25%), Query Frame = 1
BLAST of Cla002861 vs. NCBI nr
Match: gi|659081732|ref|XP_008441485.1| (PREDICTED: uncharacterized protein LOC103485592 [Cucumis melo]) HSP 1 Score: 330.9 bits (847), Expect = 1.8e-87 Identity = 174/229 (75.98%), Postives = 184/229 (80.35%), Query Frame = 1
BLAST of Cla002861 vs. NCBI nr
Match: gi|449441282|ref|XP_004138411.1| (PREDICTED: uncharacterized protein LOC101221287 [Cucumis sativus]) HSP 1 Score: 330.5 bits (846), Expect = 2.3e-87 Identity = 174/229 (75.98%), Postives = 184/229 (80.35%), Query Frame = 1
BLAST of Cla002861 vs. NCBI nr
Match: gi|296082652|emb|CBI21657.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 254.2 bits (648), Expect = 2.1e-64 Identity = 129/229 (56.33%), Postives = 160/229 (69.87%), Query Frame = 1
BLAST of Cla002861 vs. NCBI nr
Match: gi|225438281|ref|XP_002269083.1| (PREDICTED: uncharacterized protein LOC100255901 [Vitis vinifera]) HSP 1 Score: 254.2 bits (648), Expect = 2.1e-64 Identity = 129/229 (56.33%), Postives = 160/229 (69.87%), Query Frame = 1
BLAST of Cla002861 vs. NCBI nr
Match: gi|590655353|ref|XP_007033963.1| (RNA-binding family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 253.4 bits (646), Expect = 3.6e-64 Identity = 134/229 (58.52%), Postives = 159/229 (69.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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