MELO3C019042T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGACAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGTAGAACGGGATTTGTTTGATAGTTGGGTTAAGGTATTAATTTCATAATGCAATTATACATATTTTTTATAATCACAATCATCAACTAATCTCCCTAAGTTACATTTGTACAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGACCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA ATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGACAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGTAGAACGGGATTTGTTTGATAGTTGGGTTAAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGACCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA ATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGACAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGTAGAACGGGATTTGTTTGATAGTTGGGTTAAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGACCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA MAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK*
BLAST of MELO3C019042T1 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 5.8e-47 Identity = 93/159 (58.49%), Postives = 120/159 (75.47%), Query Frame = 1
BLAST of MELO3C019042T1 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 3.7e-46 Identity = 94/163 (57.67%), Postives = 124/163 (76.07%), Query Frame = 1
BLAST of MELO3C019042T1 vs. TrEMBL
Match: A0A162AHN3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_009785 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24 Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = 1
BLAST of MELO3C019042T1 vs. TrEMBL
Match: A0A161XV48_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018898 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 5.2e-24 Identity = 58/122 (47.54%), Postives = 78/122 (63.93%), Query Frame = 1
BLAST of MELO3C019042T1 vs. TrEMBL
Match: A0A0A9TMG5_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 7.6e-23 Identity = 49/99 (49.49%), Postives = 72/99 (72.73%), Query Frame = 1
BLAST of MELO3C019042T1 vs. TAIR10
Match: AT5G27260.1 (AT5G27260.1 unknown protein) HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06 Identity = 32/125 (25.60%), Postives = 57/125 (45.60%), Query Frame = 1
BLAST of MELO3C019042T1 vs. TAIR10
Match: AT1G30140.1 (AT1G30140.1 unknown protein) HSP 1 Score: 47.4 bits (111), Expect = 9.8e-06 Identity = 24/75 (32.00%), Postives = 42/75 (56.00%), Query Frame = 1
BLAST of MELO3C019042T1 vs. NCBI nr
Match: gi|659111565|ref|XP_008455793.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 334.3 bits (856), Expect = 1.1e-88 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of MELO3C019042T1 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 310.1 bits (793), Expect = 2.3e-81 Identity = 147/159 (92.45%), Postives = 151/159 (94.97%), Query Frame = 1
BLAST of MELO3C019042T1 vs. NCBI nr
Match: gi|659111306|ref|XP_008455685.1| (PREDICTED: uncharacterized protein LOC103495801 [Cucumis melo]) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48 Identity = 95/159 (59.75%), Postives = 123/159 (77.36%), Query Frame = 1
BLAST of MELO3C019042T1 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 195.3 bits (495), Expect = 8.3e-47 Identity = 93/159 (58.49%), Postives = 120/159 (75.47%), Query Frame = 1
BLAST of MELO3C019042T1 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 192.6 bits (488), Expect = 5.3e-46 Identity = 94/163 (57.67%), Postives = 124/163 (76.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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