Cla022354 (gene) Watermelon (97103) v1

Overview
NameCla022354
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEthylene-responsive transcription factor 7 (AHRD V1 *-** ERF83_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
LocationChr8 : 22821394 .. 22821983 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGACATTGGGGTTCTTGGGTCTCCGAAATTCGTCACCCTTTATTGTAAAAATCCCAACATTTTTATTCAATTCTTGCATCTCTTCTTTTACTTTACACCCATTTGCTGAATTTTTTTCTCTCTGTGCTCTGTTTTTCAGGAAGACCAGAATTTGGCTTGGTACTTTCGAAACGGCTGAAGATGCTGCTAAAGCTTACGATGAAGCTGCTCGCTTAATGTGCGGTCCAAGAGCAAGAACTAATTTCCCTTTCAACGCAAATGATTCCAATTCCTCTTCTTCTAAACTTCTCTCTCCCAATTTGACTGCAAAACTCCACCGTTGCTACATGGCGTCTCTTCATTTGCAGAAACCCGCCACCCATCGCTTCAATTCCGGTGCCGACGCGGCCGGGATTAAGCCCTTCACGGCGGAGGCAAAGACCCAAACGGAAACCGCGCATCAGCCTTTTGTGGCTCTGGAAGAGGATCATATCGAACAGATGATTGAGGAATTGATTCATTATGGGTCTGTTGAGCTCTGTTCTATTGTACCACCGTCTCCGGCGTTTTGA

mRNA sequence

ATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGACATTGGGGTTCTTGGGTCTCCGAAATTCGTCACCCTTTATTGAAGACCAGAATTTGGCTTGGTACTTTCGAAACGGCTGAAGATGCTGCTAAAGCTTACGATGAAGCTGCTCGCTTAATGTGCGGTCCAAGAGCAAGAACTAATTTCCCTTTCAACGCAAATGATTCCAATTCCTCTTCTTCTAAACTTCTCTCTCCCAATTTGACTGCAAAACTCCACCGTTGCTACATGGCGTCTCTTCATTTGCAGAAACCCGCCACCCATCGCTTCAATTCCGGTGCCGACGCGGCCGGGATTAAGCCCTTCACGGCGGAGGCAAAGACCCAAACGGAAACCGCGCATCAGCCTTTTGTGGCTCTGGAAGAGGATCATATCGAACAGATGATTGAGGAATTGATTCATTATGGGTCTGTTGAGCTCTGTTCTATTGTACCACCGTCTCCGGCGTTTTGA

Coding sequence (CDS)

ATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGACATTGGGGTTCTTGGGTCTCCGAAATTCGTCACCCTTTATTGAAGACCAGAATTTGGCTTGGTACTTTCGAAACGGCTGAAGATGCTGCTAAAGCTTACGATGAAGCTGCTCGCTTAATGTGCGGTCCAAGAGCAAGAACTAATTTCCCTTTCAACGCAAATGATTCCAATTCCTCTTCTTCTAAACTTCTCTCTCCCAATTTGACTGCAAAACTCCACCGTTGCTACATGGCGTCTCTTCATTTGCAGAAACCCGCCACCCATCGCTTCAATTCCGGTGCCGACGCGGCCGGGATTAAGCCCTTCACGGCGGAGGCAAAGACCCAAACGGAAACCGCGCATCAGCCTTTTGTGGCTCTGGAAGAGGATCATATCGAACAGATGATTGAGGAATTGATTCATTATGGGTCTGTTGAGCTCTGTTCTATTGTACCACCGTCTCCGGCGTTTTGA

Protein sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPFTAEAKTQTETAHQPFVALEEDHIEQMIEELIHYGSVELCSIVPPSPAF
Homology
[Close]
BLAST of Cla022354 vs. Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.0e-56
Identity = 115/177 (64.97%), Postives = 129/177 (72.88%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA+AYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHLQKPATHRF------NSGADAAGIK 120
           TNFP+N N   +SSSKLLS  LTAKLH+CYMASL + K    +       +  AD+ G+ 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 121 ----------PFTAEAKTQTETAH--QPFVALEEDHIEQMIEELIHYGSVELCSIVP 160
                       T E K +   A+  Q F  LEEDHIEQMIEEL+HYGS+ELCS++P
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 177

[Close]
BLAST of Cla022354 vs. Swiss-Prot
Match: PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-42
Identity = 94/164 (57.32%), Postives = 102/164 (62.20%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAA+AYDEAARLMCG RAR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHLQKPAT--------HRFNSGADAAG 120
           TNFP+N N S SSSSKLLS  L AKLHRCYMASL + +P++           N+     G
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAPRIIASPNNAVKGIG 120

Query: 121 IKPFTAEAKTQTE---------------TAHQPFVALEEDHIEQ 142
                   K + E                  Q F  LEEDHI Q
Sbjct: 121 ADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDHIAQ 164

[Close]
BLAST of Cla022354 vs. Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.2e-26
Identity = 60/101 (59.41%), Postives = 70/101 (69.31%), Query Frame = 1 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPF 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AA+AYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NAND-----------------SNSSSSKLLSPNLTAKLHRC 90
           N N+                 S+S+SS  LS  L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]
BLAST of Cla022354 vs. Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.5e-23
Identity = 61/111 (54.95%), Postives = 72/111 (64.86%), Query Frame = 1 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFP- 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AA+AYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  FNANDSNS-------SSSKLLSPNLTAKLHR-C-----YMASLHLQKPATH 103
             +N SNS        S K LS  L AKL + C     Y+  L L   ++H
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSH 115

[Close]
BLAST of Cla022354 vs. Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.4e-22
Identity = 51/86 (59.30%), Postives = 62/86 (72.09%), Query Frame = 1 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AA+AYD+AA LM G  A+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 NANDSNSS-----SSKLLSPNLTAKL 87
            ++  S      +S L+SP   ++L
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSEL 90

[Close]
BLAST of Cla022354 vs. TrEMBL
Match: A0A0A0LQD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382550 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 4.3e-82
Identity = 149/164 (90.85%), Postives = 152/164 (92.68%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA+AYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPFTAEA 120
           TNFPFN+NDSNSSSSKLLS NLTAKLHRC MASLH QKPATHRFNSG D AGIKP T E 
Sbjct: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEG 120

Query: 121 KTQTETAHQPFVALEEDHIEQMIEELIHYGSVELCSIVPPSPAF 165
            TQTE  HQPFVALEEDHIEQMIEELIHYGSVELCS+VPPS AF
Sbjct: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF 164

[Close]
BLAST of Cla022354 vs. TrEMBL
Match: D5L105_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D21 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-58
Identity = 118/176 (67.05%), Postives = 134/176 (76.14%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA+AYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHLQKPATHR-------FNSGADAAGI 120
           TNFP+N N S SS+SKLLS  LTAKLHRCYMASL + K +           +SGA    I
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKKPQALASSGAKMPDI 120

Query: 121 KPFTAE---------AKTQTETAHQPFVALEEDHIEQMIEELIHYGSVELCSIVPP 161
           KP   +          + + E++ Q F  LE+DHIEQMIEEL+HYGS+ELCS++PP
Sbjct: 121 KPEIHQPVAEENWVVREVKVESSSQQFKPLEDDHIEQMIEELLHYGSIELCSVLPP 176

[Close]
BLAST of Cla022354 vs. TrEMBL
Match: A0A078DLP7_BRANA (BnaA06g27540D protein OS=Brassica napus GN=BnaA06g27540D PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-55
Identity = 114/171 (66.67%), Postives = 126/171 (73.68%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA+AYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPFTAEA 120
           TNFP+N N   SSSSKLLS  LTAKLH+CYMASLHL K    +  + A    ++  +   
Sbjct: 61  TNFPYNPNAVPSSSSKLLSATLTAKLHKCYMASLHLTKQTQTQSQAQAQNPRLRSLSLPD 120

Query: 121 KTQTET------------AHQPFVALEEDHIEQMIEELIHYGSVELCSIVP 160
              TET              Q F  LEEDHIEQMIEEL HYGS+E CS++P
Sbjct: 121 TDITETMKEIKWEDGNANLQQSFKPLEEDHIEQMIEELRHYGSIEFCSVLP 171

[Close]
BLAST of Cla022354 vs. TrEMBL
Match: A0A067FJG7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029507mg PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-55
Identity = 118/189 (62.43%), Postives = 130/189 (68.78%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA+AYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHLQK----------PATHRFNSGADA 120
           TNFP+N N S+SSSSKLLS  LTAKLHRCYMASL + K          PA+H      +A
Sbjct: 61  TNFPYNPNASHSSSSKLLSATLTAKLHRCYMASLQMTKSSAANEPQKAPASHVSTPSGNA 120

Query: 121 AGI-------------------KPFTAEAKTQTETAHQPFVALEEDHIEQMIEELIHYGS 161
             I                   +P     K +     Q F  LE+DHIEQMIEEL+ YGS
Sbjct: 121 TRINEMGKHLLEMRPMQVQGSTEPINRAVKKEQVEIAQQFKPLEDDHIEQMIEELLDYGS 180

[Close]
BLAST of Cla022354 vs. TrEMBL
Match: V4UBY1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009593mg PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.0e-55
Identity = 117/189 (61.90%), Postives = 130/189 (68.78%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA+AYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHLQK----------PATHRFNSGADA 120
           TNFP+N N S+SSSSKLLS  LTAKLHRCYMASL + K          PA+H      +A
Sbjct: 61  TNFPYNPNASHSSSSKLLSATLTAKLHRCYMASLQMTKSSAANEPQKAPASHVSTPSGNA 120

Query: 121 AGI-------------------KPFTAEAKTQTETAHQPFVALEEDHIEQMIEELIHYGS 161
             +                   +P     K +     Q F  LE+DHIEQMIEEL+ YGS
Sbjct: 121 TRVNEMGKHLLEMRPMQVQGSTEPINRAVKKEQVEIAQQFKPLEDDHIEQMIEELLDYGS 180

[Close]
BLAST of Cla022354 vs. NCBI nr
Match: gi|659088964|ref|XP_008445254.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 313.5 bits (802), Expect = 2.1e-82
Identity = 150/164 (91.46%), Postives = 153/164 (93.29%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA+AYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPFTAEA 120
           TNFPFN+NDSNSSSSKLLS NLTAKLHRC MASLH QKPATHRFNSGAD AGIKP T E 
Sbjct: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGADVAGIKPLTVEG 120

Query: 121 KTQTETAHQPFVALEEDHIEQMIEELIHYGSVELCSIVPPSPAF 165
            TQTE  HQPFVALEEDHIEQMIEELIHYGSVELCS+VPPS AF
Sbjct: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF 164

[Close]
BLAST of Cla022354 vs. NCBI nr
Match: gi|449442154|ref|XP_004138847.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 6.2e-82
Identity = 149/164 (90.85%), Postives = 152/164 (92.68%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA+AYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPFTAEA 120
           TNFPFN+NDSNSSSSKLLS NLTAKLHRC MASLH QKPATHRFNSG D AGIKP T E 
Sbjct: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEG 120

Query: 121 KTQTETAHQPFVALEEDHIEQMIEELIHYGSVELCSIVPPSPAF 165
            TQTE  HQPFVALEEDHIEQMIEELIHYGSVELCS+VPPS AF
Sbjct: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF 164

[Close]
BLAST of Cla022354 vs. NCBI nr
Match: gi|657971770|ref|XP_008377674.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Malus domestica])

HSP 1 Score: 233.8 bits (595), Expect = 2.1e-58
Identity = 118/176 (67.05%), Postives = 134/176 (76.14%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA+AYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHLQKPATHR-------FNSGADAAGI 120
           TNFP+N N S SS+SKLLS  LTAKLHRCYMASL + K +           +SGA    I
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKKPQALASSGAKMPDI 120

Query: 121 KPFTAE---------AKTQTETAHQPFVALEEDHIEQMIEELIHYGSVELCSIVPP 161
           KP   +          + + E++ Q F  LE+DHIEQMIEEL+HYGS+ELCS++PP
Sbjct: 121 KPEIHQPVAEENWVVREVKVESSSQQFKPLEDDHIEQMIEELLHYGSIELCSVLPP 176

[Close]
BLAST of Cla022354 vs. NCBI nr
Match: gi|694312827|ref|XP_009363957.1| (PREDICTED: ethylene-responsive transcription factor ERF003 [Pyrus x bretschneideri])

HSP 1 Score: 233.0 bits (593), Expect = 3.7e-58
Identity = 118/178 (66.29%), Postives = 134/178 (75.28%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA+AYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHL--------QKPATHRFNSGADAAG 120
           TNFP+N N S SS+SKLLS  LTAKLHRCYMASL +        +KP T   +       
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKKPKTLVSSGAKMPEM 120

Query: 121 IKPFTAEA--------KTQTETAHQPFVALEEDHIEQMIEELIHYGSVELCSIVPPSP 163
           I+P   +         + + E++ Q F  LE+DHIEQMIEEL+HYGS+ELCS+VPP P
Sbjct: 121 IRPEIQQGGEENWVVREVKVESSSQQFKPLEDDHIEQMIEELLHYGSIELCSVVPPQP 178

[Close]
BLAST of Cla022354 vs. NCBI nr
Match: gi|657945205|ref|XP_008378704.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Malus domestica])

HSP 1 Score: 233.0 bits (593), Expect = 3.7e-58
Identity = 118/178 (66.29%), Postives = 134/178 (75.28%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA+AYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSPNLTAKLHRCYMASLHL--------QKPATHRFNSGADAAG 120
           TNFP+N N S SS+SKLLS  LTAKLHRCYMASL +        +KP T   +       
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKKPKTLVSSGAKMPEM 120

Query: 121 IKPFTAEA--------KTQTETAHQPFVALEEDHIEQMIEELIHYGSVELCSIVPPSP 163
           I+P   +         + + E++ Q F  LE+DHIEQMIEEL+HYGS+ELCS+VPP P
Sbjct: 121 IRPEIQQGAEENWIVREVKVESSSQQFKPLEDDHIEQMIEELLHYGSIELCSVVPPQP 178

The following BLAST results are available for this feature:
BLAST of Cla022354 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF03_ARATH2.0e-5664.97Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF00... [more]
PZ02_LUPPO1.3e-4257.32Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1[more]
WIN1_ARATH8.2e-2659.41Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE... [more]
SHN3_ARATH6.5e-2354.95Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3... [more]
SHN2_ARATH9.4e-2259.30Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2... [more]
BLAST of Cla022354 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQD0_CUCSA4.3e-8290.85Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382550 PE=4 SV=1[more]
D5L105_MALDO1.5e-5867.05AP2 domain class transcription factor OS=Malus domestica GN=AP2D21 PE=2 SV=1[more]
A0A078DLP7_BRANA1.2e-5566.67BnaA06g27540D protein OS=Brassica napus GN=BnaA06g27540D PE=4 SV=1[more]
A0A067FJG7_CITSI1.5e-5562.43Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029507mg PE=4 SV=1[more]
V4UBY1_9ROSI2.0e-5561.90Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009593mg PE=4 SV=1[more]
BLAST of Cla022354 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659088964|ref|XP_008445254.1|2.1e-8291.46PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo][more]
gi|449442154|ref|XP_004138847.1|6.2e-8290.85PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis sativus... [more]
gi|657971770|ref|XP_008377674.1|2.1e-5867.05PREDICTED: ethylene-responsive transcription factor ERF003-like [Malus domestica... [more]
gi|694312827|ref|XP_009363957.1|3.7e-5866.29PREDICTED: ethylene-responsive transcription factor ERF003 [Pyrus x bretschneide... [more]
gi|657945205|ref|XP_008378704.1|3.7e-5866.29PREDICTED: ethylene-responsive transcription factor ERF003-like [Malus domestica... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU50836watermelon EST collection version 2.0transcribed_cluster
WMU52947watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla022354Cla022354.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU52947WMU52947transcribed_cluster
WMU50836WMU50836transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 30..46
score: 4.2E-11coord: 8..19
score: 4.2
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 7..64
score: 5.8
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 7..56
score: 2.0
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 7..70
score: 6.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 7..64
score: 20
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 7..66
score: 9.15
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 1..157
score: 9.9
NoneNo IPR availablePANTHERPTHR31194:SF4ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003coord: 1..157
score: 9.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla022354MELO3C017860Melon (DHL92) v3.5.1mewmB502
Cla022354Lsi08G012350Bottle gourd (USVL1VR-Ls)lsiwmB465
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla022354Watermelon (97103) v2wmwmbB100
Cla022354Watermelon (97103) v2wmwmbB096
Cla022354Wax gourdwgowmB298
Cla022354Wax gourdwgowmB596
Cla022354Watermelon (97103) v1wmwmB058
Cla022354Watermelon (97103) v1wmwmB062
Cla022354Cucumber (Gy14) v1cgywmB116
Cla022354Cucumber (Gy14) v1cgywmB289
Cla022354Cucumber (Gy14) v1cgywmB496
Cla022354Cucurbita maxima (Rimu)cmawmB021
Cla022354Cucurbita maxima (Rimu)cmawmB148
Cla022354Cucurbita maxima (Rimu)cmawmB425
Cla022354Cucurbita maxima (Rimu)cmawmB753
Cla022354Cucurbita moschata (Rifu)cmowmB014
Cla022354Cucurbita moschata (Rifu)cmowmB134
Cla022354Cucurbita moschata (Rifu)cmowmB418
Cla022354Cucurbita moschata (Rifu)cmowmB748
Cla022354Wild cucumber (PI 183967)cpiwmB112
Cla022354Wild cucumber (PI 183967)cpiwmB301
Cla022354Wild cucumber (PI 183967)cpiwmB302
Cla022354Melon (DHL92) v3.5.1mewmB220
Cla022354Melon (DHL92) v3.5.1mewmB307
Cla022354Melon (DHL92) v3.5.1mewmB499
Cla022354Watermelon (Charleston Gray)wcgwmB277
Cla022354Watermelon (Charleston Gray)wcgwmB360
Cla022354Watermelon (Charleston Gray)wcgwmB400
Cla022354Cucumber (Chinese Long) v2cuwmB107
Cla022354Cucumber (Chinese Long) v2cuwmB300
Cla022354Cucumber (Chinese Long) v2cuwmB579
Cla022354Cucurbita pepo (Zucchini)cpewmB101
Cla022354Cucurbita pepo (Zucchini)cpewmB142
Cla022354Cucurbita pepo (Zucchini)cpewmB543
Cla022354Cucurbita pepo (Zucchini)cpewmB545
Cla022354Cucurbita pepo (Zucchini)cpewmB760
Cla022354Cucurbita pepo (Zucchini)cpewmB782
Cla022354Bottle gourd (USVL1VR-Ls)lsiwmB294
Cla022354Cucumber (Gy14) v2cgybwmB105
Cla022354Cucumber (Gy14) v2cgybwmB278
Cla022354Melon (DHL92) v3.6.1medwmB300
Cla022354Melon (DHL92) v3.6.1medwmB485
Cla022354Silver-seed gourdcarwmB0133
Cla022354Silver-seed gourdcarwmB0189
Cla022354Silver-seed gourdcarwmB0629
Cla022354Silver-seed gourdcarwmB0661
Cla022354Silver-seed gourdcarwmB0978
Cla022354Cucumber (Chinese Long) v3cucwmB121
Cla022354Cucumber (Chinese Long) v3cucwmB311
Cla022354Cucumber (Chinese Long) v3cucwmB312
Cla022354Cucumber (Chinese Long) v3cucwmB606