Cla021164 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATTAACCCAAGAGATGCCGAGCATTGGATGGCACATCGTATGCTCCCAGAGGAGTTGAGGCAGCATATACGACGATATGATCAGTATAAATGGCAGCTAAATAGGGGAGTTAAGGAAGAGGAACTCATTAGTAACCTTCCTAAAGACCTCAGGAGGGACATCAAACACCACCTTTGCTTGGCCCATCTTAAGAAAGTGAGTTCTTTTCCTTCAACTTTGGCACATTCCACCTGTGAAATTCTCAACATTTGTTAACTCAGAATGCTTTAGGTGCTGCTTTTTAGTAGCATGGATAAACAACTGTTGGACTCGATGCGTGAATATCTCCAGCCTGTGTTATTCACAAAAAGAGGTTCATTCTGCAAGAGGTTGACCCAATTGATATGATGCTATTTATCATGAAAGGAAAGCTGGCTACCATTATTACCTGGGGTTGGGAAAAGCGACCAGTACGTGGTCACTCTTAACGCTGGTGACTTTTGTGGCGAAGAGCTAGTTCAATGGGCAATGAATACCACCTCCACTTCTCTTCCCATTTCAAACAGAACAATTAATACTCTAATTGAGGTTGAAGCCTTTGCTCTAAAGGCTAATGAGCTGAAATTTGTAACTAGACAGTACCATTTCCAGCGCCTCAATAGCACGCAATTCCAACTCTCAGTGAGGCATGTTCTTACTGAACTTACACATCAATTGTTCTAG ATGAAAATTAACCCAAGAGATGCCGAGCATTGGATGGCACATCGTATGCTCCCAGAGGAGTTGAGGCAGCATATACGACGATATGATCAGTATAAATGGCAGCTAAATAGGGGAGTTAAGGAAGAGGAACTCATTAGTAACCTTCCTAAAGACCTCAGGAGGGACATCAAACACCACCTTTGCTTGGCCCATCTTAAGAAAGTGCTGCTTTTTAGTAGCATGGATAAACAACTGTTGGACTCGATGCGTGAATATCTCCAGCCTGAAAGCTGGCTACCATTATTACCTGGGGTTGGGAAAAGCGACCAGTACGTGGTCACTCTTAACGCTGGTGACTTTTGTGGCGAAGAGCTAGTTCAATGGGCAATGAATACCACCTCCACTTCTCTTCCCATTTCAAACAGAACAATTAATACTCTAATTGAGGTTGAAGCCTTTGCTCTAAAGGCTAATGAGCTGAAATTTGTAACTAGACAGTACCATTTCCAGCGCCTCAATAGCACGCAATTCCAACTCTCAGTGAGGCATGTTCTTACTGAACTTACACATCAATTGTTCTAG ATGAAAATTAACCCAAGAGATGCCGAGCATTGGATGGCACATCGTATGCTCCCAGAGGAGTTGAGGCAGCATATACGACGATATGATCAGTATAAATGGCAGCTAAATAGGGGAGTTAAGGAAGAGGAACTCATTAGTAACCTTCCTAAAGACCTCAGGAGGGACATCAAACACCACCTTTGCTTGGCCCATCTTAAGAAAGTGCTGCTTTTTAGTAGCATGGATAAACAACTGTTGGACTCGATGCGTGAATATCTCCAGCCTGAAAGCTGGCTACCATTATTACCTGGGGTTGGGAAAAGCGACCAGTACGTGGTCACTCTTAACGCTGGTGACTTTTGTGGCGAAGAGCTAGTTCAATGGGCAATGAATACCACCTCCACTTCTCTTCCCATTTCAAACAGAACAATTAATACTCTAATTGAGGTTGAAGCCTTTGCTCTAAAGGCTAATGAGCTGAAATTTGTAACTAGACAGTACCATTTCCAGCGCCTCAATAGCACGCAATTCCAACTCTCAGTGAGGCATGTTCTTACTGAACTTACACATCAATTGTTCTAG MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHLCLAHLKKVLLFSSMDKQLLDSMREYLQPESWLPLLPGVGKSDQYVVTLNAGDFCGEELVQWAMNTTSTSLPISNRTINTLIEVEAFALKANELKFVTRQYHFQRLNSTQFQLSVRHVLTELTHQLF
BLAST of Cla021164 vs. Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 6.9e-45 Identity = 102/202 (50.50%), Postives = 135/202 (66.83%), Query Frame = 1
BLAST of Cla021164 vs. Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 172.2 bits (435), Expect = 5.4e-42 Identity = 98/201 (48.76%), Postives = 124/201 (61.69%), Query Frame = 1
BLAST of Cla021164 vs. Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=3 SV=2) HSP 1 Score: 170.6 bits (431), Expect = 1.6e-41 Identity = 98/201 (48.76%), Postives = 126/201 (62.69%), Query Frame = 1
BLAST of Cla021164 vs. Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 169.1 bits (427), Expect = 4.6e-41 Identity = 99/201 (49.25%), Postives = 126/201 (62.69%), Query Frame = 1
BLAST of Cla021164 vs. Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=2 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.0e-40 Identity = 98/201 (48.76%), Postives = 122/201 (60.70%), Query Frame = 1
BLAST of Cla021164 vs. TrEMBL
Match: A0A0A0L8L1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119640 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 8.4e-66 Identity = 138/199 (69.35%), Postives = 150/199 (75.38%), Query Frame = 1
BLAST of Cla021164 vs. TrEMBL
Match: A0A0A0L356_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119630 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 7.9e-64 Identity = 136/201 (67.66%), Postives = 151/201 (75.12%), Query Frame = 1
BLAST of Cla021164 vs. TrEMBL
Match: A0A078GPA3_BRANA (BnaA02g10440D protein OS=Brassica napus GN=BnaA02g10440D PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.2e-43 Identity = 104/201 (51.74%), Postives = 134/201 (66.67%), Query Frame = 1
BLAST of Cla021164 vs. TrEMBL
Match: M4E1I2_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.2e-43 Identity = 104/201 (51.74%), Postives = 134/201 (66.67%), Query Frame = 1
BLAST of Cla021164 vs. TrEMBL
Match: A0A078E2Q2_BRANA (BnaC02g14560D protein OS=Brassica napus GN=BnaC02g14560D PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.2e-43 Identity = 104/201 (51.74%), Postives = 134/201 (66.67%), Query Frame = 1
BLAST of Cla021164 vs. NCBI nr
Match: gi|778676918|ref|XP_004134306.2| (PREDICTED: cyclic nucleotide-gated ion channel 1 [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 1.2e-65 Identity = 138/199 (69.35%), Postives = 150/199 (75.38%), Query Frame = 1
BLAST of Cla021164 vs. NCBI nr
Match: gi|659074987|ref|XP_008437903.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis melo]) HSP 1 Score: 257.7 bits (657), Expect = 1.6e-65 Identity = 137/199 (68.84%), Postives = 149/199 (74.87%), Query Frame = 1
BLAST of Cla021164 vs. NCBI nr
Match: gi|659074995|ref|XP_008437907.1| (PREDICTED: cyclic nucleotide-gated ion channel 1 [Cucumis melo]) HSP 1 Score: 251.9 bits (642), Expect = 8.6e-64 Identity = 136/201 (67.66%), Postives = 151/201 (75.12%), Query Frame = 1
BLAST of Cla021164 vs. NCBI nr
Match: gi|778676921|ref|XP_011650688.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis sativus]) HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63 Identity = 136/201 (67.66%), Postives = 151/201 (75.12%), Query Frame = 1
BLAST of Cla021164 vs. NCBI nr
Match: gi|922428905|ref|XP_013620483.1| (PREDICTED: cyclic nucleotide-gated ion channel 1 [Brassica oleracea var. oleracea]) HSP 1 Score: 184.5 bits (467), Expect = 1.7e-43 Identity = 104/201 (51.74%), Postives = 134/201 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |