Bhi04G000041 (gene) Wax gourd

NameBhi04G000041
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr4 : 1408013 .. 1408264 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGAATGTCTCCAAACAGAGCTTGAAAGGTTGAGAAAAGAGAATGAAGCTCTAAAGTTTATGCTCAGAGTTGTGAGCATCAAGAATTTGGTTTCTCAAACGGATGTTTGTTTAAGAGATCAAAGTGATGGTTTGAACCAAAGTTCGAACACAAGAGCGAGAGCCGATCTCGAAGTTCCACTCGCTCTCGCACTCGGACCTTCGTCCACGACCCAAGCATATGTTAGAACTAGCTTCAAAGACCAAGCATTG

mRNA sequence

GTGGAATGTCTCCAAACAGAGCTTGAAAGGTTGAGAAAAGAGAATGAAGCTCTAAAGTTTATGCTCAGAGTTGTGAGCATCAAGAATTTGGTTTCTCAAACGGATGTTTGTTTAAGAGATCAAAGTGATGGTTTGAACCAAAGTTCGAACACAAGAGCGAGAGCCGATCTCGAAGTTCCACTCGCTCTCGCACTCGGACCTTCGTCCACGACCCAAGCATATGTTAGAACTAGCTTCAAAGACCAAGCATTG

Coding sequence (CDS)

GTGGAATGTCTCCAAACAGAGCTTGAAAGGTTGAGAAAAGAGAATGAAGCTCTAAAGTTTATGCTCAGAGTTGTGAGCATCAAGAATTTGGTTTCTCAAACGGATGTTTGTTTAAGAGATCAAAGTGATGGTTTGAACCAAAGTTCGAACACAAGAGCGAGAGCCGATCTCGAAGTTCCACTCGCTCTCGCACTCGGACCTTCGTCCACGACCCAAGCATATGTTAGAACTAGCTTCAAAGACCAAGCATTG

Protein sequence

VECLQTELERLRKENEALKFMLRVVSIKNLVSQTDVCLRDQSDGLNQSSNTRARADLEVPLALALGPSSTTQAYVRTSFKDQAL
BLAST of Bhi04G000041 vs. TrEMBL
Match: tr|A0A0A0LMJ1|A0A0A0LMJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382660 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.8e-20
Identity = 60/87 (68.97%), Postives = 66/87 (75.86%), Query Frame = 0

Query: 1  VECLQTELERLRKENEALKFMLRVVSIKNLVSQTDVCLRDQSDGLNQSSNTRARADLEV- 60
          VECLQTELE+LRKENEALK ML+VVSIKNLVSQ DVC RD     N   +   RA+L+V 
Sbjct: 5  VECLQTELEKLRKENEALKLMLKVVSIKNLVSQVDVCSRDHRHDQNDEGSRSERANLKVS 64

Query: 61 --PLALALGPSSTTQAYVRTSFKDQAL 85
             LALAL  SSTTQAY RT+FKDQAL
Sbjct: 65 PPALALALETSSTTQAYARTTFKDQAL 91

BLAST of Bhi04G000041 vs. TrEMBL
Match: tr|A0A1S4DVG5|A0A1S4DVG5_CUCME (probable WRKY transcription factor 40 OS=Cucumis melo OX=3656 GN=LOC103488348 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.4e-07
Identity = 39/64 (60.94%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 21 MLRVVSIKNLVSQTDVCLRDQSDGLNQSSNTRARADLEVPLALALGPSSTTQAYVRTSFK 80
          ML+VVSIKNLVSQ DVC RD     N   +   RADL V     L  SSTTQAY  TSFK
Sbjct: 1  MLKVVSIKNLVSQVDVCSRDHDQ--NDEGSRSERADLRVS-PPTLETSSTTQAYATTSFK 60

Query: 81 DQAL 85
          DQAL
Sbjct: 61 DQAL 61

BLAST of Bhi04G000041 vs. NCBI nr
Match: XP_004138843.1 (PREDICTED: probable WRKY transcription factor 60 [Cucumis sativus] >KGN62993.1 hypothetical protein Csa_2G382660 [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 8.8e-20
Identity = 60/87 (68.97%), Postives = 66/87 (75.86%), Query Frame = 0

Query: 1  VECLQTELERLRKENEALKFMLRVVSIKNLVSQTDVCLRDQSDGLNQSSNTRARADLEV- 60
          VECLQTELE+LRKENEALK ML+VVSIKNLVSQ DVC RD     N   +   RA+L+V 
Sbjct: 5  VECLQTELEKLRKENEALKLMLKVVSIKNLVSQVDVCSRDHRHDQNDEGSRSERANLKVS 64

Query: 61 --PLALALGPSSTTQAYVRTSFKDQAL 85
             LALAL  SSTTQAY RT+FKDQAL
Sbjct: 65 PPALALALETSSTTQAYARTTFKDQAL 91

BLAST of Bhi04G000041 vs. NCBI nr
Match: XP_022132094.1 (WRKY transcription factor WRKY76-like [Momordica charantia])

HSP 1 Score: 80.9 bits (198), Expect = 2.3e-12
Identity = 53/92 (57.61%), Postives = 59/92 (64.13%), Query Frame = 0

Query: 1  VECLQTELERLRKENEALKFMLRVVSIKNLV--------SQTDVCLRDQSDGLNQSSNTR 60
          VECLQ ELERLRK NEAL F L V+S+KNL+        SQ  V L  +   LN +SN R
Sbjct: 11 VECLQKELERLRKANEALNFALGVMSMKNLIISRETNTNSQVGVFL--EGSDLNCNSNKR 70

Query: 61 ARADLEVPLALALGPSSTTQAYVRTSFKDQAL 85
          ARADL+      LG  STTQ YVRT FKDQAL
Sbjct: 71 ARADLQA--RAGLGAPSTTQTYVRTGFKDQAL 98

BLAST of Bhi04G000041 vs. NCBI nr
Match: XP_016899977.1 (PREDICTED: probable WRKY transcription factor 40 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06
Identity = 39/64 (60.94%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 21 MLRVVSIKNLVSQTDVCLRDQSDGLNQSSNTRARADLEVPLALALGPSSTTQAYVRTSFK 80
          ML+VVSIKNLVSQ DVC RD     N   +   RADL V     L  SSTTQAY  TSFK
Sbjct: 1  MLKVVSIKNLVSQVDVCSRDHDQ--NDEGSRSERADLRVS-PPTLETSSTTQAYATTSFK 60

Query: 81 DQAL 85
          DQAL
Sbjct: 61 DQAL 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LMJ1|A0A0A0LMJ1_CUCSA5.8e-2068.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382660 PE=4 SV=1[more]
tr|A0A1S4DVG5|A0A1S4DVG5_CUCME7.4e-0760.94probable WRKY transcription factor 40 OS=Cucumis melo OX=3656 GN=LOC103488348 PE... [more]
Match NameE-valueIdentityDescription
XP_004138843.18.8e-2068.97PREDICTED: probable WRKY transcription factor 60 [Cucumis sativus] >KGN62993.1 h... [more]
XP_022132094.12.3e-1257.61WRKY transcription factor WRKY76-like [Momordica charantia][more]
XP_016899977.11.1e-0660.94PREDICTED: probable WRKY transcription factor 40 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000041Bhi04M000041mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi04G000041Wax gourdwgowgoB091
Bhi04G000041Cucumber (Gy14) v1cgywgoB313
Bhi04G000041Cucumber (Gy14) v1cgywgoB548
Bhi04G000041Cucumber (Gy14) v2cgybwgoB151
Bhi04G000041Cucumber (Gy14) v2cgybwgoB369
Bhi04G000041Cucurbita maxima (Rimu)cmawgoB0017
Bhi04G000041Cucurbita maxima (Rimu)cmawgoB0195
Bhi04G000041Cucurbita maxima (Rimu)cmawgoB0945
Bhi04G000041Cucurbita moschata (Rifu)cmowgoB0009
Bhi04G000041Cucurbita moschata (Rifu)cmowgoB0191
Bhi04G000041Cucurbita moschata (Rifu)cmowgoB0945
Bhi04G000041Cucurbita pepo (Zucchini)cpewgoB0142
Bhi04G000041Cucurbita pepo (Zucchini)cpewgoB0980
Bhi04G000041Cucurbita pepo (Zucchini)cpewgoB1029
Bhi04G000041Wild cucumber (PI 183967)cpiwgoB154
Bhi04G000041Wild cucumber (PI 183967)cpiwgoB390
Bhi04G000041Cucumber (Chinese Long) v3cucwgoB163
Bhi04G000041Cucumber (Chinese Long) v3cucwgoB392
Bhi04G000041Cucumber (Chinese Long) v2cuwgoB156
Bhi04G000041Cucumber (Chinese Long) v2cuwgoB387
Bhi04G000041Bottle gourd (USVL1VR-Ls)lsiwgoB364
Bhi04G000041Bottle gourd (USVL1VR-Ls)lsiwgoB592
Bhi04G000041Melon (DHL92) v3.6.1medwgoB342
Bhi04G000041Melon (DHL92) v3.6.1medwgoB593
Bhi04G000041Melon (DHL92) v3.5.1mewgoB343
Bhi04G000041Melon (DHL92) v3.5.1mewgoB587
Bhi04G000041Watermelon (Charleston Gray)wcgwgoB458
Bhi04G000041Watermelon (Charleston Gray)wcgwgoB613
Bhi04G000041Watermelon (97103) v2wgowmbB307
Bhi04G000041Watermelon (97103) v2wgowmbB314
Bhi04G000041Watermelon (97103) v1wgowmB298
Bhi04G000041Watermelon (97103) v1wgowmB335
Bhi04G000041Silver-seed gourdcarwgoB0173
Bhi04G000041Silver-seed gourdcarwgoB0750
Bhi04G000041Silver-seed gourdcarwgoB1142