Bhi05M001631 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAACCAGAACCGATTACAAATACATGCACCGATGGAAGATGGAAGTGGTTTCAGGTACAAAAATTACTCAGTTTTTTATATGAATACGTCATAAATATGCATGCAACAATAGATTTTTTTTTTTAATTCATTCTGATCACTTGAGAGAAACAGAATTGTCTAGGTGCGCTAGACGGCACATACATTAAAGTGAATGTTAGTGTCGTCGATCAACCTCGATATAGGACGAGAAAGGGAGAGATTGCCACAAAC AAAACCAGAACCGATTACAAATACATGCACCGATGGAAGATGGAAGTGGTTTCAGAATTGTCTAGGTGCGCTAGACGGCACATACATTAAAGTGAATGTTAGTGTCGTCGATCAACCTCGATATAGGACGAGAAAGGGAGAGATTGCCACAAAC AAAACCAGAACCGATTACAAATACATGCACCGATGGAAGATGGAAGTGGTTTCAGAATTGTCTAGGTGCGCTAGACGGCACATACATTAAAGTGAATGTTAGTGTCGTCGATCAACCTCGATATAGGACGAGAAAGGGAGAGATTGCCACAAAC KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN
BLAST of Bhi05M001631 vs. TAIR10
Match: AT5G28950.1 (unknown protein) HSP 1 Score: 40.8 bits (94), Expect = 2.9e-04 Identity = 16/38 (42.11%), Postives = 26/38 (68.42%), Query Frame = 0
BLAST of Bhi05M001631 vs. TrEMBL
Match: tr|A0A1S3C1U8|A0A1S3C1U8_CUCME (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103495887 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.5e-20 Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = 0
BLAST of Bhi05M001631 vs. TrEMBL
Match: tr|A0A1S3C5E3|A0A1S3C5E3_CUCME (uncharacterized protein LOC103496660 OS=Cucumis melo OX=3656 GN=LOC103496660 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 4.3e-18 Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of Bhi05M001631 vs. TrEMBL
Match: tr|A0A2H3X8X5|A0A2H3X8X5_PHODC (uncharacterized protein LOC103699964 OS=Phoenix dactylifera OX=42345 GN=LOC103699964 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.3e-17 Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 0
BLAST of Bhi05M001631 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 3.6e-17 Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0
BLAST of Bhi05M001631 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 3.6e-17 Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0
BLAST of Bhi05M001631 vs. NCBI nr
Match: XP_008455792.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo]) HSP 1 Score: 105.5 bits (262), Expect = 5.3e-20 Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = 0
BLAST of Bhi05M001631 vs. NCBI nr
Match: XP_008456821.1 (PREDICTED: uncharacterized protein LOC103496660 [Cucumis melo]) HSP 1 Score: 98.6 bits (244), Expect = 6.5e-18 Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of Bhi05M001631 vs. NCBI nr
Match: XP_008780171.1 (PREDICTED: uncharacterized protein LOC103699964, partial [Phoenix dactylifera]) HSP 1 Score: 97.1 bits (240), Expect = 1.9e-17 Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 0
BLAST of Bhi05M001631 vs. NCBI nr
Match: XP_024045039.1 (protein ALP1-like [Citrus clementina]) HSP 1 Score: 95.9 bits (237), Expect = 4.2e-17 Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 0
BLAST of Bhi05M001631 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 95.5 bits (236), Expect = 5.5e-17 Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
|