Bhi05M001614 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQANTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEVLGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSDRNKLDFGELKYEETSDCK
BLAST of Bhi05M001614 vs. Swiss-Prot
Match: sp|Q9SKU6|PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26 Identity = 53/127 (41.73%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of Bhi05M001614 vs. Swiss-Prot
Match: sp|Q84JR3|PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 9.3e-13 Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0
BLAST of Bhi05M001614 vs. Swiss-Prot
Match: sp|Q8LPS6|PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 9.3e-13 Identity = 37/127 (29.13%), Postives = 69/127 (54.33%), Query Frame = 0
BLAST of Bhi05M001614 vs. Swiss-Prot
Match: sp|O22714|PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.5e-12 Identity = 37/127 (29.13%), Postives = 68/127 (53.54%), Query Frame = 0
BLAST of Bhi05M001614 vs. Swiss-Prot
Match: sp|Q3E911|PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.6e-12 Identity = 34/133 (25.56%), Postives = 71/133 (53.38%), Query Frame = 0
BLAST of Bhi05M001614 vs. TAIR10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 121.3 bits (303), Expect = 6.3e-28 Identity = 53/127 (41.73%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of Bhi05M001614 vs. TAIR10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 75.1 bits (183), Expect = 5.2e-14 Identity = 37/127 (29.13%), Postives = 69/127 (54.33%), Query Frame = 0
BLAST of Bhi05M001614 vs. TAIR10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 75.1 bits (183), Expect = 5.2e-14 Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0
BLAST of Bhi05M001614 vs. TAIR10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 73.2 bits (178), Expect = 2.0e-13 Identity = 37/127 (29.13%), Postives = 68/127 (53.54%), Query Frame = 0
BLAST of Bhi05M001614 vs. TAIR10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 72.8 bits (177), Expect = 2.6e-13 Identity = 34/133 (25.56%), Postives = 71/133 (53.38%), Query Frame = 0
BLAST of Bhi05M001614 vs. TrEMBL
Match: tr|A0A0A0K3R7|A0A0A0K3R7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047440 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 5.0e-72 Identity = 135/163 (82.82%), Postives = 143/163 (87.73%), Query Frame = 0
BLAST of Bhi05M001614 vs. TrEMBL
Match: tr|A0A1S4E0B6|A0A1S4E0B6_CUCME (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103495690 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 6.6e-72 Identity = 133/170 (78.24%), Postives = 146/170 (85.88%), Query Frame = 0
BLAST of Bhi05M001614 vs. TrEMBL
Match: tr|A0A0A0K1S9|A0A0A0K1S9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047450 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.6e-70 Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0
BLAST of Bhi05M001614 vs. TrEMBL
Match: tr|A0A2N9HF60|A0A2N9HF60_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38096 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43 Identity = 89/149 (59.73%), Postives = 109/149 (73.15%), Query Frame = 0
BLAST of Bhi05M001614 vs. TrEMBL
Match: tr|A0A2P4JTJ4|A0A2P4JTJ4_QUESU (Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_65317 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 3.2e-42 Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 0
BLAST of Bhi05M001614 vs. NCBI nr
Match: XP_022147816.1 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Momordica charantia]) HSP 1 Score: 287.3 bits (734), Expect = 3.6e-74 Identity = 140/186 (75.27%), Postives = 158/186 (84.95%), Query Frame = 0
BLAST of Bhi05M001614 vs. NCBI nr
Match: KGN43609.1 (hypothetical protein Csa_7G047440 [Cucumis sativus]) HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72 Identity = 135/163 (82.82%), Postives = 143/163 (87.73%), Query Frame = 0
BLAST of Bhi05M001614 vs. NCBI nr
Match: XP_016901673.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo]) HSP 1 Score: 279.3 bits (713), Expect = 9.9e-72 Identity = 133/170 (78.24%), Postives = 146/170 (85.88%), Query Frame = 0
BLAST of Bhi05M001614 vs. NCBI nr
Match: KGN43610.1 (hypothetical protein Csa_7G047450 [Cucumis sativus]) HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70 Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0
BLAST of Bhi05M001614 vs. NCBI nr
Match: XP_011659707.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g74580 [Cucumis sativus]) HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70 Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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