Bhi05G001614 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G001614
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Pentatricopeptide repeat-containing protein, mitochondrial
Location	chr5 : 58788448 .. 58789014 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA

mRNA sequence

ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA

Coding sequence (CDS)

ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA

Protein sequence

MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQANTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEVLGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSDRNKLDFGELKYEETSDCK

Homology

[Close]

BLAST of Bhi05G001614 vs. Swiss-Prot
Match: sp|Q9SKU6|PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 53/127 (41.73%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+DDI+  EKI++EWE+  + FD +I +++I  YCKKG ++KAE  ++ L++  +    
Sbjct: 326 LKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDT 385

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           +TW+RLA GY   G   KAVE  K+AI VS+PGW+P+   L +C +YL+   ++E   ++
Sbjct: 386 STWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKI 445

Query: 121 LGLLHKR 128
           L LL +R
Sbjct: 446 LRLLSER 452

[Close]

BLAST of Bhi05G001614 vs. Swiss-Prot
Match: sp|Q84JR3|PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.3e-13
Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+D +  AE++L EW+S   C+DF++ N +I  Y  K   +KAEA +  L   GK    
Sbjct: 313 VKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTP 372

Query: 61  NTWDRLASGYHANGLTNKAVETLKKA--ISVSQPGWKPNYHTLAACFEYLKTNGNVELAE 120
            +W+ +A+ Y   G    A + +K A  + V    W+P    + +   ++   G+++  E
Sbjct: 373 ESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVE 432

Query: 121 EVLGLL 125
             +  L
Sbjct: 433 SFVASL 438

[Close]

BLAST of Bhi05G001614 vs. Swiss-Prot
Match: sp|Q8LPS6|PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 9.3e-13
Identity = 37/127 (29.13%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +++ DI+ AEK+ +EW    + +D +I N+++N+Y K   ++ AE     ++E G +P +
Sbjct: 356 VRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSS 415

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISV-SQPGWKPNYHTLAACFEYLKTNGNVELAEE 120
           +TW+ LA G+      ++A+  L+ A S      W+P    L+  F+  +   +V   E 
Sbjct: 416 STWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEA 475

Query: 121 VLGLLHK 127
           VL LL +
Sbjct: 476 VLELLRQ 482

[Close]

BLAST of Bhi05G001614 vs. Swiss-Prot
Match: sp|O22714|PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-12
Identity = 37/127 (29.13%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +KL+D+  AE + KEW++  + +D +I N++I +Y ++G + KA     +    G +  A
Sbjct: 310 VKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNA 369

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPG---WKPNYHTLAACFEYLKTNGNVELA 120
            TW+     Y  +G   +A+E + KA+S+ +     W P+  T+ A   Y +   +V  A
Sbjct: 370 KTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGA 429

Query: 121 EEVLGLL 125
           E +L +L
Sbjct: 430 ENLLEIL 436

[Close]

BLAST of Bhi05G001614 vs. Swiss-Prot
Match: sp|Q3E911|PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.6e-12
Identity = 34/133 (25.56%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K  D++ AE++  EWE+    +D ++SN+++ +Y + G + KAE+    ++E G  P  
Sbjct: 330 VKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNY 389

Query: 61  NTWDRLASGYHANGLTNKAVETLKKA-ISVSQPGWKPNYHTLAACFEYLKTNGNVELAEE 120
            TW+ L  G+       KA++ + +  + + +  W+P+++ + A  EY +    +E A  
Sbjct: 390 KTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATA 449

Query: 121 VLGLLHKRDIVPL 133
            +  LH+  +  L
Sbjct: 450 YVRDLHRLGLASL 462

[Close]

BLAST of Bhi05G001614 vs. TAIR10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 121.3 bits (303), Expect = 6.3e-28
Identity = 53/127 (41.73%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+DDI+  EKI++EWE+  + FD +I +++I  YCKKG ++KAE  ++ L++  +    
Sbjct: 326 LKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDT 385

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           +TW+RLA GY   G   KAVE  K+AI VS+PGW+P+   L +C +YL+   ++E   ++
Sbjct: 386 STWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKI 445

Query: 121 LGLLHKR 128
           L LL +R
Sbjct: 446 LRLLSER 452

[Close]

BLAST of Bhi05G001614 vs. TAIR10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 5.2e-14
Identity = 37/127 (29.13%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +++ DI+ AEK+ +EW    + +D +I N+++N+Y K   ++ AE     ++E G +P +
Sbjct: 356 VRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSS 415

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISV-SQPGWKPNYHTLAACFEYLKTNGNVELAEE 120
           +TW+ LA G+      ++A+  L+ A S      W+P    L+  F+  +   +V   E 
Sbjct: 416 STWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEA 475

Query: 121 VLGLLHK 127
           VL LL +
Sbjct: 476 VLELLRQ 482

[Close]

BLAST of Bhi05G001614 vs. TAIR10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 5.2e-14
Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+D +  AE++L EW+S   C+DF++ N +I  Y  K   +KAEA +  L   GK    
Sbjct: 313 VKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTP 372

Query: 61  NTWDRLASGYHANGLTNKAVETLKKA--ISVSQPGWKPNYHTLAACFEYLKTNGNVELAE 120
            +W+ +A+ Y   G    A + +K A  + V    W+P    + +   ++   G+++  E
Sbjct: 373 ESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVE 432

Query: 121 EVLGLL 125
             +  L
Sbjct: 433 SFVASL 438

[Close]

BLAST of Bhi05G001614 vs. TAIR10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-13
Identity = 37/127 (29.13%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +KL+D+  AE + KEW++  + +D +I N++I +Y ++G + KA     +    G +  A
Sbjct: 310 VKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNA 369

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPG---WKPNYHTLAACFEYLKTNGNVELA 120
            TW+     Y  +G   +A+E + KA+S+ +     W P+  T+ A   Y +   +V  A
Sbjct: 370 KTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGA 429

Query: 121 EEVLGLL 125
           E +L +L
Sbjct: 430 ENLLEIL 436

[Close]

BLAST of Bhi05G001614 vs. TAIR10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 2.6e-13
Identity = 34/133 (25.56%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K  D++ AE++  EWE+    +D ++SN+++ +Y + G + KAE+    ++E G  P  
Sbjct: 330 VKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNY 389

Query: 61  NTWDRLASGYHANGLTNKAVETLKKA-ISVSQPGWKPNYHTLAACFEYLKTNGNVELAEE 120
            TW+ L  G+       KA++ + +  + + +  W+P+++ + A  EY +    +E A  
Sbjct: 390 KTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATA 449

Query: 121 VLGLLHKRDIVPL 133
            +  LH+  +  L
Sbjct: 450 YVRDLHRLGLASL 462

[Close]

BLAST of Bhi05G001614 vs. TrEMBL
Match: tr|A0A0A0K3R7|A0A0A0K3R7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047440 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 5.0e-72
Identity = 135/163 (82.82%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYISRLIENGKEP+A
Sbjct: 324 MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRA 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             WDRLASGYH+NGLTNKA ETLKKAISVS P WKPNY  LAAC EYLKTNGNVELAEE+
Sbjct: 384 YAWDRLASGYHSNGLTNKAAETLKKAISVSPPRWKPNYDILAACLEYLKTNGNVELAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNK 164
           +GLL KRDI PLNIC RLEDYIHSENQ SIKC D LGL+ +N+
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIHSENQNSIKCLDLLGLKDQNE 486

[Close]

BLAST of Bhi05G001614 vs. TrEMBL
Match: tr|A0A1S4E0B6|A0A1S4E0B6_CUCME (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103495690 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 6.6e-72
Identity = 133/170 (78.24%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DTCFDF+I NMMINSYC KGF+DKAEAYISRLIENGKEP+A
Sbjct: 364 MKLDDIDGAERILKEWESGDTCFDFRIPNMMINSYCTKGFMDKAEAYISRLIENGKEPRA 423

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             WDRL SGYH+NGLTNKA ET+KKAISVS P WKPN H +AAC EYLKTNGNVELAEE+
Sbjct: 424 FAWDRLVSGYHSNGLTNKAAETMKKAISVSPPRWKPNNHIVAACLEYLKTNGNVELAEEI 483

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
           +GLL K DI P NICNRLEDYIHSENQTSIKC D L L+G+++ L H  D
Sbjct: 484 IGLLCKGDIFPSNICNRLEDYIHSENQTSIKCLDLLDLKGQSEGLDHELD 533

[Close]

BLAST of Bhi05G001614 vs. TrEMBL
Match: tr|A0A0A0K1S9|A0A0A0K1S9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047450 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.6e-70
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYI+RLIE GKEP+A
Sbjct: 324 MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEA 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           NTWD LASGYH+NGLTNK  ETLKKAISVS P WKP YH LAAC EYLKTN NV+LAEE+
Sbjct: 384 NTWDLLASGYHSNGLTNKVAETLKKAISVSPPHWKPKYHILAACLEYLKTNENVDLAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
           +GLL KRDI PLNIC RLEDYI SENQ SIKC D LGL+G+N+    + D
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIRSENQNSIKCLDLLGLKGQNEEPDQVLD 493

[Close]

BLAST of Bhi05G001614 vs. TrEMBL
Match: tr|A0A2N9HF60|A0A2N9HF60_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38096 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43
Identity = 89/149 (59.73%), Postives = 109/149 (73.15%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +KLDDID AEKIL+EWES +  FD ++ N+MI +YCKKG  +KAEAYI+RLIE GKE  +
Sbjct: 325 LKLDDIDGAEKILEEWESGNKFFDIRVPNVMITAYCKKGLFEKAEAYINRLIECGKETNS 384

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           +TW RLA+GYH +G   KAVET+KK I  SQPGWK N  TLAAC +YLK  G VE+AEE+
Sbjct: 385 STWGRLATGYHEHGQMEKAVETMKKTILASQPGWKLNRLTLAACLDYLKGKGEVEVAEEI 444

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTS 150
           L LL K  +    I  RL +YIH+EN  S
Sbjct: 445 LRLLKKHSLFSTGIHERLLNYIHNENPDS 473

[Close]

BLAST of Bhi05G001614 vs. TrEMBL
Match: tr|A0A2P4JTJ4|A0A2P4JTJ4_QUESU (Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_65317 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.2e-42
Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +KLDDID AEKIL+EWES +T FD +I +++I++YC+KG ++KAEAY++RLIE GKE ++
Sbjct: 324 LKLDDIDGAEKILEEWESENTFFDSRIPHLLISAYCRKGLLEKAEAYMNRLIECGKETES 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             W RLA+GYH +G   KAVET+KKAI  SQPGW P+  TLAAC +YLK NG  E+AEE+
Sbjct: 384 TKWGRLATGYHVHGQMEKAVETMKKAILASQPGWMPSRFTLAACLDYLKGNGEAEVAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTS 150
           L LL +       I  RL +YIHSEN+ S
Sbjct: 444 LRLLREHVHFSTGIYERLLNYIHSENKDS 472

[Close]

BLAST of Bhi05G001614 vs. NCBI nr
Match: XP_022147816.1 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Momordica charantia])

HSP 1 Score: 287.3 bits (734), Expect = 3.6e-74
Identity = 140/186 (75.27%), Postives = 158/186 (84.95%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDI+ AEKILKEWES DTCFDFKI NMMIN YC+KG VDKAEAYISRL+E+GKEPQA
Sbjct: 325 MKLDDIEGAEKILKEWESGDTCFDFKIPNMMINIYCRKGLVDKAEAYISRLMESGKEPQA 384

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           NTWDRLA+GYHANG T KAVET+KKAIS SQPGWKPN HTLAAC E+LKTN NVE+AEE+
Sbjct: 385 NTWDRLATGYHANGQTMKAVETIKKAISASQPGWKPNDHTLAACLEFLKTNENVEVAEEI 444

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSDRNKLDFGELK 180
           + LL K DIV + IC+ L DY+HSE QTS    DQLGL+G+ +R +H SDRNKLD  E+K
Sbjct: 445 IRLLRKHDIVSIRICDGLVDYVHSEIQTS-SALDQLGLDGQIERHNHASDRNKLDIAEVK 504

Query: 181 YEETSD 187
           YEETSD
Sbjct: 505 YEETSD 509

[Close]

BLAST of Bhi05G001614 vs. NCBI nr
Match: KGN43609.1 (hypothetical protein Csa_7G047440 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72
Identity = 135/163 (82.82%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYISRLIENGKEP+A
Sbjct: 324 MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRA 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             WDRLASGYH+NGLTNKA ETLKKAISVS P WKPNY  LAAC EYLKTNGNVELAEE+
Sbjct: 384 YAWDRLASGYHSNGLTNKAAETLKKAISVSPPRWKPNYDILAACLEYLKTNGNVELAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNK 164
           +GLL KRDI PLNIC RLEDYIHSENQ SIKC D LGL+ +N+
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIHSENQNSIKCLDLLGLKDQNE 486

[Close]

BLAST of Bhi05G001614 vs. NCBI nr
Match: XP_016901673.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo])

HSP 1 Score: 279.3 bits (713), Expect = 9.9e-72
Identity = 133/170 (78.24%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DTCFDF+I NMMINSYC KGF+DKAEAYISRLIENGKEP+A
Sbjct: 364 MKLDDIDGAERILKEWESGDTCFDFRIPNMMINSYCTKGFMDKAEAYISRLIENGKEPRA 423

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             WDRL SGYH+NGLTNKA ET+KKAISVS P WKPN H +AAC EYLKTNGNVELAEE+
Sbjct: 424 FAWDRLVSGYHSNGLTNKAAETMKKAISVSPPRWKPNNHIVAACLEYLKTNGNVELAEEI 483

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
           +GLL K DI P NICNRLEDYIHSENQTSIKC D L L+G+++ L H  D
Sbjct: 484 IGLLCKGDIFPSNICNRLEDYIHSENQTSIKCLDLLDLKGQSEGLDHELD 533

[Close]

BLAST of Bhi05G001614 vs. NCBI nr
Match: KGN43610.1 (hypothetical protein Csa_7G047450 [Cucumis sativus])

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYI+RLIE GKEP+A
Sbjct: 324 MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEA 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           NTWD LASGYH+NGLTNK  ETLKKAISVS P WKP YH LAAC EYLKTN NV+LAEE+
Sbjct: 384 NTWDLLASGYHSNGLTNKVAETLKKAISVSPPHWKPKYHILAACLEYLKTNENVDLAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
           +GLL KRDI PLNIC RLEDYI SENQ SIKC D LGL+G+N+    + D
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIRSENQNSIKCLDLLGLKGQNEEPDQVLD 493

[Close]

BLAST of Bhi05G001614 vs. NCBI nr
Match: XP_011659707.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g74580 [Cucumis sativus])

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1    MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
            MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYI+RLIE GKEP+A
Sbjct: 853  MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEA 912

Query: 61   NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
            NTWD LASGYH+NGLTNK  ETLKKAISVS P WKP YH LAAC EYLKTN NV+LAEE+
Sbjct: 913  NTWDLLASGYHSNGLTNKVAETLKKAISVSPPHWKPKYHILAACLEYLKTNENVDLAEEI 972

Query: 121  LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
            +GLL KRDI PLNIC RLEDYI SENQ SIKC D LGL+G+N+    + D
Sbjct: 973  IGLLCKRDIFPLNICKRLEDYIRSENQNSIKCLDLLGLKGQNEEPDQVLD 1022

The following BLAST results are available for this feature:

BLAST of Bhi05G001614 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SKU6\|PP166_ARATH	1.1e-26	41.73	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
sp\|Q84JR3\|PP334_ARATH	9.3e-13	27.78	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
sp\|Q8LPS6\|PPR3_ARATH	9.3e-13	29.13	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
sp\|O22714\|PPR86_ARATH	3.5e-12	29.13	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
sp\|Q3E911\|PP400_ARATH	4.6e-12	25.56	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]

BLAST of Bhi05G001614 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20710.1	6.3e-28	41.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	5.2e-14	29.13	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	5.2e-14	27.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	2.0e-13	29.13	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27460.1	2.6e-13	25.56	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Bhi05G001614 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K3R7\|A0A0A0K3R7_CUCSA	5.0e-72	82.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047440 PE=4 SV=1	[more]
tr\|A0A1S4E0B6\|A0A1S4E0B6_CUCME	6.6e-72	78.24	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
tr\|A0A0A0K1S9\|A0A0A0K1S9_CUCSA	1.6e-70	77.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047450 PE=4 SV=1	[more]
tr\|A0A2N9HF60\|A0A2N9HF60_FAGSY	3.8e-43	59.73	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38096 PE=4 SV=1	[more]
tr\|A0A2P4JTJ4\|A0A2P4JTJ4_QUESU	3.2e-42	57.72	Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=5...	[more]

BLAST of Bhi05G001614 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147816.1	3.6e-74	75.27	pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Momordica ...	[more]
KGN43609.1	7.6e-72	82.82	hypothetical protein Csa_7G047440 [Cucumis sativus]	[more]
XP_016901673.1	9.9e-72	78.24	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
KGN43610.1	2.4e-70	77.65	hypothetical protein Csa_7G047450 [Cucumis sativus]	[more]
XP_011659707.1	2.4e-70	77.65	PREDICTED: putative pentatricopeptide repeat-containing protein At1g74580 [Cucum...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001614	Bhi05M001614	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 29..58 e-value: 5.2E-6 score: 24.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 29..55 e-value: 2.2E-5 score: 24.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 97..131 score: 6.38
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 59..93 score: 5.229
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 24..58 score: 10.249
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 1..188 e-value: 1.6E-17 score: 65.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 7..108
None	No IPR available	PANTHER	PTHR24015:SF644	SUBFAMILY NOT NAMED	coord: 1..144
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..144

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G001614	Wax gourd	wgowgoB071
Bhi05G001614	Wax gourd	wgowgoB075
Bhi05G001614	Cucumber (Gy14) v1	cgywgoB207
Bhi05G001614	Cucumber (Gy14) v1	cgywgoB288
Bhi05G001614	Cucumber (Gy14) v2	cgybwgoB541
Bhi05G001614	Cucumber (Gy14) v2	cgybwgoB633
Bhi05G001614	Cucurbita maxima (Rimu)	cmawgoB0117
Bhi05G001614	Cucurbita maxima (Rimu)	cmawgoB0643
Bhi05G001614	Cucurbita maxima (Rimu)	cmawgoB0679
Bhi05G001614	Cucurbita maxima (Rimu)	cmawgoB0740
Bhi05G001614	Cucurbita moschata (Rifu)	cmowgoB0109
Bhi05G001614	Cucurbita moschata (Rifu)	cmowgoB0234
Bhi05G001614	Cucurbita moschata (Rifu)	cmowgoB0643
Bhi05G001614	Cucurbita moschata (Rifu)	cmowgoB0730
Bhi05G001614	Cucurbita pepo (Zucchini)	cpewgoB0318
Bhi05G001614	Cucurbita pepo (Zucchini)	cpewgoB0844
Bhi05G001614	Cucurbita pepo (Zucchini)	cpewgoB0933
Bhi05G001614	Wild cucumber (PI 183967)	cpiwgoB574
Bhi05G001614	Wild cucumber (PI 183967)	cpiwgoB673
Bhi05G001614	Cucumber (Chinese Long) v3	cucwgoB587
Bhi05G001614	Cucumber (Chinese Long) v3	cucwgoB687
Bhi05G001614	Cucumber (Chinese Long) v2	cuwgoB570
Bhi05G001614	Cucumber (Chinese Long) v2	cuwgoB662
Bhi05G001614	Bottle gourd (USVL1VR-Ls)	lsiwgoB063
Bhi05G001614	Bottle gourd (USVL1VR-Ls)	lsiwgoB116
Bhi05G001614	Melon (DHL92) v3.6.1	medwgoB111
Bhi05G001614	Melon (DHL92) v3.6.1	medwgoB221
Bhi05G001614	Melon (DHL92) v3.5.1	mewgoB110
Bhi05G001614	Melon (DHL92) v3.5.1	mewgoB221
Bhi05G001614	Watermelon (Charleston Gray)	wcgwgoB270
Bhi05G001614	Watermelon (Charleston Gray)	wcgwgoB586
Bhi05G001614	Watermelon (97103) v2	wgowmbB245
Bhi05G001614	Watermelon (97103) v2	wgowmbB262
Bhi05G001614	Watermelon (97103) v1	wgowmB268
Bhi05G001614	Watermelon (97103) v1	wgowmB277
Bhi05G001614	Silver-seed gourd	carwgoB0847
Bhi05G001614	Silver-seed gourd	carwgoB1021