Bhi05M001614 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05M001614
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	Pentatricopeptide repeat-containing protein, mitochondrial
Location	chr5 : 58788448 .. 58789014 (+)
Sequence length	567

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA

mRNA sequence

ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA

Coding sequence (CDS)

ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA

Protein sequence

MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQANTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEVLGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSDRNKLDFGELKYEETSDCK

Homology

[Close]

BLAST of Bhi05M001614 vs. Swiss-Prot
Match: sp|Q9SKU6|PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 53/127 (41.73%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+DDI+  EKI++EWE+  + FD +I +++I  YCKKG ++KAE  ++ L++  +    
Sbjct: 326 LKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDT 385

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           +TW+RLA GY   G   KAVE  K+AI VS+PGW+P+   L +C +YL+   ++E   ++
Sbjct: 386 STWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKI 445

Query: 121 LGLLHKR 128
           L LL +R
Sbjct: 446 LRLLSER 452

[Close]

BLAST of Bhi05M001614 vs. Swiss-Prot
Match: sp|Q84JR3|PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.3e-13
Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+D +  AE++L EW+S   C+DF++ N +I  Y  K   +KAEA +  L   GK    
Sbjct: 313 VKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTP 372

Query: 61  NTWDRLASGYHANGLTNKAVETLKKA--ISVSQPGWKPNYHTLAACFEYLKTNGNVELAE 120
            +W+ +A+ Y   G    A + +K A  + V    W+P    + +   ++   G+++  E
Sbjct: 373 ESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVE 432

Query: 121 EVLGLL 125
             +  L
Sbjct: 433 SFVASL 438

[Close]

BLAST of Bhi05M001614 vs. Swiss-Prot
Match: sp|Q8LPS6|PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 9.3e-13
Identity = 37/127 (29.13%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +++ DI+ AEK+ +EW    + +D +I N+++N+Y K   ++ AE     ++E G +P +
Sbjct: 356 VRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSS 415

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISV-SQPGWKPNYHTLAACFEYLKTNGNVELAEE 120
           +TW+ LA G+      ++A+  L+ A S      W+P    L+  F+  +   +V   E 
Sbjct: 416 STWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEA 475

Query: 121 VLGLLHK 127
           VL LL +
Sbjct: 476 VLELLRQ 482

[Close]

BLAST of Bhi05M001614 vs. Swiss-Prot
Match: sp|O22714|PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-12
Identity = 37/127 (29.13%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +KL+D+  AE + KEW++  + +D +I N++I +Y ++G + KA     +    G +  A
Sbjct: 310 VKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNA 369

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPG---WKPNYHTLAACFEYLKTNGNVELA 120
            TW+     Y  +G   +A+E + KA+S+ +     W P+  T+ A   Y +   +V  A
Sbjct: 370 KTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGA 429

Query: 121 EEVLGLL 125
           E +L +L
Sbjct: 430 ENLLEIL 436

[Close]

BLAST of Bhi05M001614 vs. Swiss-Prot
Match: sp|Q3E911|PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.6e-12
Identity = 34/133 (25.56%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K  D++ AE++  EWE+    +D ++SN+++ +Y + G + KAE+    ++E G  P  
Sbjct: 330 VKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNY 389

Query: 61  NTWDRLASGYHANGLTNKAVETLKKA-ISVSQPGWKPNYHTLAACFEYLKTNGNVELAEE 120
            TW+ L  G+       KA++ + +  + + +  W+P+++ + A  EY +    +E A  
Sbjct: 390 KTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATA 449

Query: 121 VLGLLHKRDIVPL 133
            +  LH+  +  L
Sbjct: 450 YVRDLHRLGLASL 462

[Close]

BLAST of Bhi05M001614 vs. TAIR10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 121.3 bits (303), Expect = 6.3e-28
Identity = 53/127 (41.73%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+DDI+  EKI++EWE+  + FD +I +++I  YCKKG ++KAE  ++ L++  +    
Sbjct: 326 LKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDT 385

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           +TW+RLA GY   G   KAVE  K+AI VS+PGW+P+   L +C +YL+   ++E   ++
Sbjct: 386 STWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKI 445

Query: 121 LGLLHKR 128
           L LL +R
Sbjct: 446 LRLLSER 452

[Close]

BLAST of Bhi05M001614 vs. TAIR10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 5.2e-14
Identity = 37/127 (29.13%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +++ DI+ AEK+ +EW    + +D +I N+++N+Y K   ++ AE     ++E G +P +
Sbjct: 356 VRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSS 415

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISV-SQPGWKPNYHTLAACFEYLKTNGNVELAEE 120
           +TW+ LA G+      ++A+  L+ A S      W+P    L+  F+  +   +V   E 
Sbjct: 416 STWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEA 475

Query: 121 VLGLLHK 127
           VL LL +
Sbjct: 476 VLELLRQ 482

[Close]

BLAST of Bhi05M001614 vs. TAIR10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 5.2e-14
Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+D +  AE++L EW+S   C+DF++ N +I  Y  K   +KAEA +  L   GK    
Sbjct: 313 VKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTP 372

Query: 61  NTWDRLASGYHANGLTNKAVETLKKA--ISVSQPGWKPNYHTLAACFEYLKTNGNVELAE 120
            +W+ +A+ Y   G    A + +K A  + V    W+P    + +   ++   G+++  E
Sbjct: 373 ESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVE 432

Query: 121 EVLGLL 125
             +  L
Sbjct: 433 SFVASL 438

[Close]

BLAST of Bhi05M001614 vs. TAIR10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-13
Identity = 37/127 (29.13%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +KL+D+  AE + KEW++  + +D +I N++I +Y ++G + KA     +    G +  A
Sbjct: 310 VKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNA 369

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPG---WKPNYHTLAACFEYLKTNGNVELA 120
            TW+     Y  +G   +A+E + KA+S+ +     W P+  T+ A   Y +   +V  A
Sbjct: 370 KTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGA 429

Query: 121 EEVLGLL 125
           E +L +L
Sbjct: 430 ENLLEIL 436

[Close]

BLAST of Bhi05M001614 vs. TAIR10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 2.6e-13
Identity = 34/133 (25.56%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K  D++ AE++  EWE+    +D ++SN+++ +Y + G + KAE+    ++E G  P  
Sbjct: 330 VKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNY 389

Query: 61  NTWDRLASGYHANGLTNKAVETLKKA-ISVSQPGWKPNYHTLAACFEYLKTNGNVELAEE 120
            TW+ L  G+       KA++ + +  + + +  W+P+++ + A  EY +    +E A  
Sbjct: 390 KTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATA 449

Query: 121 VLGLLHKRDIVPL 133
            +  LH+  +  L
Sbjct: 450 YVRDLHRLGLASL 462

[Close]

BLAST of Bhi05M001614 vs. TrEMBL
Match: tr|A0A0A0K3R7|A0A0A0K3R7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047440 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 5.0e-72
Identity = 135/163 (82.82%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYISRLIENGKEP+A
Sbjct: 324 MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRA 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             WDRLASGYH+NGLTNKA ETLKKAISVS P WKPNY  LAAC EYLKTNGNVELAEE+
Sbjct: 384 YAWDRLASGYHSNGLTNKAAETLKKAISVSPPRWKPNYDILAACLEYLKTNGNVELAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNK 164
           +GLL KRDI PLNIC RLEDYIHSENQ SIKC D LGL+ +N+
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIHSENQNSIKCLDLLGLKDQNE 486

[Close]

BLAST of Bhi05M001614 vs. TrEMBL
Match: tr|A0A1S4E0B6|A0A1S4E0B6_CUCME (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103495690 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 6.6e-72
Identity = 133/170 (78.24%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DTCFDF+I NMMINSYC KGF+DKAEAYISRLIENGKEP+A
Sbjct: 364 MKLDDIDGAERILKEWESGDTCFDFRIPNMMINSYCTKGFMDKAEAYISRLIENGKEPRA 423

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             WDRL SGYH+NGLTNKA ET+KKAISVS P WKPN H +AAC EYLKTNGNVELAEE+
Sbjct: 424 FAWDRLVSGYHSNGLTNKAAETMKKAISVSPPRWKPNNHIVAACLEYLKTNGNVELAEEI 483

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
           +GLL K DI P NICNRLEDYIHSENQTSIKC D L L+G+++ L H  D
Sbjct: 484 IGLLCKGDIFPSNICNRLEDYIHSENQTSIKCLDLLDLKGQSEGLDHELD 533

[Close]

BLAST of Bhi05M001614 vs. TrEMBL
Match: tr|A0A0A0K1S9|A0A0A0K1S9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047450 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.6e-70
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYI+RLIE GKEP+A
Sbjct: 324 MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEA 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           NTWD LASGYH+NGLTNK  ETLKKAISVS P WKP YH LAAC EYLKTN NV+LAEE+
Sbjct: 384 NTWDLLASGYHSNGLTNKVAETLKKAISVSPPHWKPKYHILAACLEYLKTNENVDLAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
           +GLL KRDI PLNIC RLEDYI SENQ SIKC D LGL+G+N+    + D
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIRSENQNSIKCLDLLGLKGQNEEPDQVLD 493

[Close]

BLAST of Bhi05M001614 vs. TrEMBL
Match: tr|A0A2N9HF60|A0A2N9HF60_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38096 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43
Identity = 89/149 (59.73%), Postives = 109/149 (73.15%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +KLDDID AEKIL+EWES +  FD ++ N+MI +YCKKG  +KAEAYI+RLIE GKE  +
Sbjct: 325 LKLDDIDGAEKILEEWESGNKFFDIRVPNVMITAYCKKGLFEKAEAYINRLIECGKETNS 384

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           +TW RLA+GYH +G   KAVET+KK I  SQPGWK N  TLAAC +YLK  G VE+AEE+
Sbjct: 385 STWGRLATGYHEHGQMEKAVETMKKTILASQPGWKLNRLTLAACLDYLKGKGEVEVAEEI 444

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTS 150
           L LL K  +    I  RL +YIH+EN  S
Sbjct: 445 LRLLKKHSLFSTGIHERLLNYIHNENPDS 473

[Close]

BLAST of Bhi05M001614 vs. TrEMBL
Match: tr|A0A2P4JTJ4|A0A2P4JTJ4_QUESU (Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_65317 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.2e-42
Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +KLDDID AEKIL+EWES +T FD +I +++I++YC+KG ++KAEAY++RLIE GKE ++
Sbjct: 324 LKLDDIDGAEKILEEWESENTFFDSRIPHLLISAYCRKGLLEKAEAYMNRLIECGKETES 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             W RLA+GYH +G   KAVET+KKAI  SQPGW P+  TLAAC +YLK NG  E+AEE+
Sbjct: 384 TKWGRLATGYHVHGQMEKAVETMKKAILASQPGWMPSRFTLAACLDYLKGNGEAEVAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTS 150
           L LL +       I  RL +YIHSEN+ S
Sbjct: 444 LRLLREHVHFSTGIYERLLNYIHSENKDS 472

[Close]

BLAST of Bhi05M001614 vs. NCBI nr
Match: XP_022147816.1 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Momordica charantia])

HSP 1 Score: 287.3 bits (734), Expect = 3.6e-74
Identity = 140/186 (75.27%), Postives = 158/186 (84.95%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDI+ AEKILKEWES DTCFDFKI NMMIN YC+KG VDKAEAYISRL+E+GKEPQA
Sbjct: 325 MKLDDIEGAEKILKEWESGDTCFDFKIPNMMINIYCRKGLVDKAEAYISRLMESGKEPQA 384

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           NTWDRLA+GYHANG T KAVET+KKAIS SQPGWKPN HTLAAC E+LKTN NVE+AEE+
Sbjct: 385 NTWDRLATGYHANGQTMKAVETIKKAISASQPGWKPNDHTLAACLEFLKTNENVEVAEEI 444

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSDRNKLDFGELK 180
           + LL K DIV + IC+ L DY+HSE QTS    DQLGL+G+ +R +H SDRNKLD  E+K
Sbjct: 445 IRLLRKHDIVSIRICDGLVDYVHSEIQTS-SALDQLGLDGQIERHNHASDRNKLDIAEVK 504

Query: 181 YEETSD 187
           YEETSD
Sbjct: 505 YEETSD 509

[Close]

BLAST of Bhi05M001614 vs. NCBI nr
Match: KGN43609.1 (hypothetical protein Csa_7G047440 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72
Identity = 135/163 (82.82%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYISRLIENGKEP+A
Sbjct: 324 MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRA 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             WDRLASGYH+NGLTNKA ETLKKAISVS P WKPNY  LAAC EYLKTNGNVELAEE+
Sbjct: 384 YAWDRLASGYHSNGLTNKAAETLKKAISVSPPRWKPNYDILAACLEYLKTNGNVELAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNK 164
           +GLL KRDI PLNIC RLEDYIHSENQ SIKC D LGL+ +N+
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIHSENQNSIKCLDLLGLKDQNE 486

[Close]

BLAST of Bhi05M001614 vs. NCBI nr
Match: XP_016901673.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo])

HSP 1 Score: 279.3 bits (713), Expect = 9.9e-72
Identity = 133/170 (78.24%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DTCFDF+I NMMINSYC KGF+DKAEAYISRLIENGKEP+A
Sbjct: 364 MKLDDIDGAERILKEWESGDTCFDFRIPNMMINSYCTKGFMDKAEAYISRLIENGKEPRA 423

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             WDRL SGYH+NGLTNKA ET+KKAISVS P WKPN H +AAC EYLKTNGNVELAEE+
Sbjct: 424 FAWDRLVSGYHSNGLTNKAAETMKKAISVSPPRWKPNNHIVAACLEYLKTNGNVELAEEI 483

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
           +GLL K DI P NICNRLEDYIHSENQTSIKC D L L+G+++ L H  D
Sbjct: 484 IGLLCKGDIFPSNICNRLEDYIHSENQTSIKCLDLLDLKGQSEGLDHELD 533

[Close]

BLAST of Bhi05M001614 vs. NCBI nr
Match: KGN43610.1 (hypothetical protein Csa_7G047450 [Cucumis sativus])

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYI+RLIE GKEP+A
Sbjct: 324 MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEA 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           NTWD LASGYH+NGLTNK  ETLKKAISVS P WKP YH LAAC EYLKTN NV+LAEE+
Sbjct: 384 NTWDLLASGYHSNGLTNKVAETLKKAISVSPPHWKPKYHILAACLEYLKTNENVDLAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
           +GLL KRDI PLNIC RLEDYI SENQ SIKC D LGL+G+N+    + D
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIRSENQNSIKCLDLLGLKGQNEEPDQVLD 493

[Close]

BLAST of Bhi05M001614 vs. NCBI nr
Match: XP_011659707.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g74580 [Cucumis sativus])

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1    MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
            MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYI+RLIE GKEP+A
Sbjct: 853  MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEA 912

Query: 61   NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
            NTWD LASGYH+NGLTNK  ETLKKAISVS P WKP YH LAAC EYLKTN NV+LAEE+
Sbjct: 913  NTWDLLASGYHSNGLTNKVAETLKKAISVSPPHWKPKYHILAACLEYLKTNENVDLAEEI 972

Query: 121  LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
            +GLL KRDI PLNIC RLEDYI SENQ SIKC D LGL+G+N+    + D
Sbjct: 973  IGLLCKRDIFPLNICKRLEDYIRSENQNSIKCLDLLGLKGQNEEPDQVLD 1022

The following BLAST results are available for this feature:

BLAST of Bhi05M001614 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SKU6\|PP166_ARATH	1.1e-26	41.73	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
sp\|Q84JR3\|PP334_ARATH	9.3e-13	27.78	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
sp\|Q8LPS6\|PPR3_ARATH	9.3e-13	29.13	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
sp\|O22714\|PPR86_ARATH	3.5e-12	29.13	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
sp\|Q3E911\|PP400_ARATH	4.6e-12	25.56	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]

BLAST of Bhi05M001614 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20710.1	6.3e-28	41.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	5.2e-14	29.13	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	5.2e-14	27.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	2.0e-13	29.13	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27460.1	2.6e-13	25.56	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Bhi05M001614 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K3R7\|A0A0A0K3R7_CUCSA	5.0e-72	82.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047440 PE=4 SV=1	[more]
tr\|A0A1S4E0B6\|A0A1S4E0B6_CUCME	6.6e-72	78.24	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
tr\|A0A0A0K1S9\|A0A0A0K1S9_CUCSA	1.6e-70	77.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047450 PE=4 SV=1	[more]
tr\|A0A2N9HF60\|A0A2N9HF60_FAGSY	3.8e-43	59.73	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38096 PE=4 SV=1	[more]
tr\|A0A2P4JTJ4\|A0A2P4JTJ4_QUESU	3.2e-42	57.72	Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=5...	[more]

BLAST of Bhi05M001614 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147816.1	3.6e-74	75.27	pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Momordica ...	[more]
KGN43609.1	7.6e-72	82.82	hypothetical protein Csa_7G047440 [Cucumis sativus]	[more]
XP_016901673.1	9.9e-72	78.24	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
KGN43610.1	2.4e-70	77.65	hypothetical protein Csa_7G047450 [Cucumis sativus]	[more]
XP_011659707.1	2.4e-70	77.65	PREDICTED: putative pentatricopeptide repeat-containing protein At1g74580 [Cucum...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi05G001614	Bhi05G001614	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi05M001614.exon1	Bhi05M001614.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi05M001614	cds.Bhi05M001614	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi05M001614	Bhi05M001614-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 29..58 e-value: 5.2E-6 score: 24.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 29..55 e-value: 2.2E-5 score: 24.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 97..131 score: 6.38
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 59..93 score: 5.229
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 24..58 score: 10.249
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 1..188 e-value: 1.6E-17 score: 65.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 7..108
None	No IPR available	PANTHER	PTHR24015:SF644	SUBFAMILY NOT NAMED	coord: 1..144
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..144