Bhi05G001332 (gene) Wax gourd

Overview
NameBhi05G001332
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr5 : 51989376 .. 51989927 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAGCTTGCAGCGGCAACTCCGCCTCGTCTAGCGGCAGCCGATCATACACCTGTCTCTTATACACATCTAGATGTGTATAAGAGACAGGCCCTGCCCTTGCCCGCCGGACAAATAAATCGTCAGCCCGCCGGCACCCGGCGGCGCAGGCGGCGGCAACGCTGTACCGGTTAGAGACACAATCTCAAACGTTCCATGAAGCGTCATAACAGTCCCCGACGGCGCCCCCGGCTGGCGCAAGTTGACGTTTGTGACGGCGCCGGTGCCGGCGAGAATGCAAACACCGTGACGACGGCGCGTGGCGTAATTCGAGACTGATTCTACCACATCGAAGCCGGCGGAGACCTCCAGCACGTGCGATCTCAGAGCATTGGGGCTGTCACGTGTTACGATCACCGGCGGTTTTGGCTTGTTCTTGGAGCCGGCAGGGCGACCTCGAGAGCGGCGCGTGGATGAACCGCCACTGGTGGGGGTGGTTGAATCGGCCGGATTGAGATTTTTCTGATGATTTTCCGGCGAGTTGTTGGGATCGGCGAGATGGGTTTGTGA

mRNA sequence

ATGGCTGAGCTTGCAGCGGCAACTCCGCCTCGTCTAGCGGCAGCCGATCATACACCTGTCTCTTATACACATCTAGATGTGTATAAGAGACAGGCCCTGCCCTTGCCCGCCGGACAAATAAATCGTCAGCCCGCCGGCACCCGGCGGCGCAGGCGGCGGCAACGCTGTACCGTTGACGTTTGTGACGGCGCCGGTGCCGGCGAGAATGCAAACACCACTGATTCTACCACATCGAAGCCGGCGGAGACCTCCAGCACGTGCGATCTCAGAGCATTGGGGCTGTCACGTGTTACGATCACCGGCGGTTTTGGCTTGTTCTTGGAGCCGGCAGGGCGACCTCGAGAGCGGCGCGTGGATGAACCGCCACTGATTTTTCTGATGATTTTCCGGCGAGTTGTTGGGATCGGCGAGATGGGTTTGTGA

Coding sequence (CDS)

ATGGCTGAGCTTGCAGCGGCAACTCCGCCTCGTCTAGCGGCAGCCGATCATACACCTGTCTCTTATACACATCTAGATGTGTATAAGAGACAGGCCCTGCCCTTGCCCGCCGGACAAATAAATCGTCAGCCCGCCGGCACCCGGCGGCGCAGGCGGCGGCAACGCTGTACCGTTGACGTTTGTGACGGCGCCGGTGCCGGCGAGAATGCAAACACCACTGATTCTACCACATCGAAGCCGGCGGAGACCTCCAGCACGTGCGATCTCAGAGCATTGGGGCTGTCACGTGTTACGATCACCGGCGGTTTTGGCTTGTTCTTGGAGCCGGCAGGGCGACCTCGAGAGCGGCGCGTGGATGAACCGCCACTGATTTTTCTGATGATTTTCCGGCGAGTTGTTGGGATCGGCGAGATGGGTTTGTGA

Protein sequence

MAELAAATPPRLAAADHTPVSYTHLDVYKRQALPLPAGQINRQPAGTRRRRRRQRCTVDVCDGAGAGENANTTDSTTSKPAETSSTCDLRALGLSRVTITGGFGLFLEPAGRPRERRVDEPPLIFLMIFRRVVGIGEMGL
Homology
[Close]
BLAST of Bhi05G001332 vs. TrEMBL
Match: tr|A0A0A9S0X7|A0A0A9S0X7_ARUDO (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-05
Identity = 30/48 (62.50%), Postives = 32/48 (66.67%), Query Frame = 0 

Query: 75  STTSKPAETSSTCDLRALGLSRVTITGGFGLFLEPAGRPRERRVDEPP 123
           ST S P   SST +   LGLSRVT TGGFGLFL+P G PR RR   PP
Sbjct: 93  STMSAPLAISSTWERITLGLSRVTTTGGFGLFLDPGGLPRGRRPAPPP 140

[Close]
BLAST of Bhi05G001332 vs. TrEMBL
Match: tr|A0A0A9F391|A0A0A9F391_ARUDO (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-05
Identity = 30/48 (62.50%), Postives = 32/48 (66.67%), Query Frame = 0 

Query: 75  STTSKPAETSSTCDLRALGLSRVTITGGFGLFLEPAGRPRERRVDEPP 123
           ST S P   SST +   LGLSRVT TGGFGLFL+P G PR RR   PP
Sbjct: 93  STMSAPLAISSTWERITLGLSRVTTTGGFGLFLDPGGLPRGRRPAPPP 140

[Close]
BLAST of Bhi05G001332 vs. TrEMBL
Match: tr|A0A0A9FWG2|A0A0A9FWG2_ARUDO (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.9e-05
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0 

Query: 75  STTSKPAETSSTCDLRALGLSRVTITGGFGLFLEPAGRPR 115
           STTS PA TS TC+  ALGLSRV + GG GLFL+P+G PR
Sbjct: 97  STTSAPAATSRTCEWSALGLSRVIMMGGLGLFLDPSGLPR 136

[Close]
BLAST of Bhi05G001332 vs. TrEMBL
Match: tr|A0A0S3RB27|A0A0S3RB27_PHAAN (Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G017000 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.7e-04
Identity = 27/44 (61.36%), Postives = 30/44 (68.18%), Query Frame = 0 

Query: 75  STTSKPAETSSTCDLRALGLSRVTIT-GGFGLFLEPAGRPRERR 118
           S TS P E SSTC+ RA  LS VT+  GG GLFL+P  RPR RR
Sbjct: 19  SITSAPREISSTCECRAFALSHVTMMGGGLGLFLDPGSRPRGRR 62

The following BLAST results are available for this feature:
BLAST of Bhi05G001332 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi05G001332 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi05G001332 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A9S0X7|A0A0A9S0X7_ARUDO1.4e-0562.50Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
tr|A0A0A9F391|A0A0A9F391_ARUDO1.4e-0562.50Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
tr|A0A0A9FWG2|A0A0A9FWG2_ARUDO3.9e-0567.50Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
tr|A0A0S3RB27|A0A0S3RB27_PHAAN9.7e-0461.36Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis OX=157739 G... [more]
BLAST of Bhi05G001332 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M001332Bhi05M001332mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..85

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi05G001332Cucumber (Gy14) v1cgywgoB547
Bhi05G001332Cucumber (Gy14) v2cgybwgoB536
Bhi05G001332Cucumber (Gy14) v2cgybwgoB641
Bhi05G001332Cucurbita maxima (Rimu)cmawgoB0115
Bhi05G001332Cucurbita maxima (Rimu)cmawgoB0652
Bhi05G001332Cucurbita maxima (Rimu)cmawgoB0678
Bhi05G001332Cucurbita maxima (Rimu)cmawgoB0738
Bhi05G001332Cucurbita moschata (Rifu)cmowgoB0115
Bhi05G001332Cucurbita moschata (Rifu)cmowgoB0653
Bhi05G001332Cucurbita moschata (Rifu)cmowgoB0674
Bhi05G001332Cucurbita moschata (Rifu)cmowgoB0732
Bhi05G001332Cucurbita pepo (Zucchini)cpewgoB0326
Bhi05G001332Cucurbita pepo (Zucchini)cpewgoB0349
Bhi05G001332Cucurbita pepo (Zucchini)cpewgoB0934
Bhi05G001332Cucurbita pepo (Zucchini)cpewgoB0851
Bhi05G001332Wild cucumber (PI 183967)cpiwgoB566
Bhi05G001332Wild cucumber (PI 183967)cpiwgoB681
Bhi05G001332Cucumber (Chinese Long) v3cucwgoB579
Bhi05G001332Cucumber (Chinese Long) v3cucwgoB695
Bhi05G001332Cucumber (Chinese Long) v2cuwgoB561
Bhi05G001332Cucumber (Chinese Long) v2cuwgoB670
Bhi05G001332Bottle gourd (USVL1VR-Ls)lsiwgoB064
Bhi05G001332Bottle gourd (USVL1VR-Ls)lsiwgoB118
Bhi05G001332Melon (DHL92) v3.6.1medwgoB108
Bhi05G001332Melon (DHL92) v3.6.1medwgoB216
Bhi05G001332Melon (DHL92) v3.5.1mewgoB107
Bhi05G001332Melon (DHL92) v3.5.1mewgoB216
Bhi05G001332Watermelon (Charleston Gray)wcgwgoB272
Bhi05G001332Watermelon (Charleston Gray)wcgwgoB266
Bhi05G001332Watermelon (97103) v2wgowmbB241
Bhi05G001332Watermelon (97103) v2wgowmbB247
Bhi05G001332Watermelon (97103) v1wgowmB272
Bhi05G001332Silver-seed gourdcarwgoB0251
Bhi05G001332Silver-seed gourdcarwgoB0429
Bhi05G001332Silver-seed gourdcarwgoB0995
Bhi05G001332Silver-seed gourdcarwgoB1253
Bhi05G001332Cucumber (Gy14) v1cgywgoB208
Bhi05G001332Cucumber (Gy14) v1cgywgoB145