Bhi10G001734 (gene) Wax gourd

Overview
NameBhi10G001734
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionGlycosyltransferase
Locationchr10 : 53506381 .. 53506584 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGATTGCAATTGGGCTGTGTATATTTGTTTTGGAACTTTGGCCAAATTCTCAACAGAAGGAGATTAAAATTGGGCTGGAAGCTTCCGTGAAAAGGAAAATCATATGGATTGTTAGGAAAGAGAAAGGGGAAGAAGAGGAAGATGAACACAAGTACCACAAAGAAGGATACGAACATAAGATGGAAGGAACTAATTAG

mRNA sequence

ATGAAGAAGATTGCAATTGGGCTGTGTATATTTGTTTTGGAACTTTGGCCAAATTCTCAACAGAAGGAGATTAAAATTGGGCTGGAAGCTTCCGTGAAAAGGAAAATCATATGGATTGTTAGGAAAGAGAAAGGGGAAGAAGAGGAAGATGAACACAAGTACCACAAAGAAGGATACGAACATAAGATGGAAGGAACTAATTAG

Coding sequence (CDS)

ATGAAGAAGATTGCAATTGGGCTGTGTATATTTGTTTTGGAACTTTGGCCAAATTCTCAACAGAAGGAGATTAAAATTGGGCTGGAAGCTTCCGTGAAAAGGAAAATCATATGGATTGTTAGGAAAGAGAAAGGGGAAGAAGAGGAAGATGAACACAAGTACCACAAAGAAGGATACGAACATAAGATGGAAGGAACTAATTAG

Protein sequence

MKKIAIGLCIFVLELWPNSQQKEIKIGLEASVKRKIIWIVRKEKGEEEEDEHKYHKEGYEHKMEGTN
Homology
[Close]
BLAST of Bhi10G001734 vs. TrEMBL
Match: tr|A0A1S3BZB7|A0A1S3BZB7_CUCME (Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103495252 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.2e-05
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 0 

Query: 8   LCIFVLELWPNSQQKEIKIGLEASVKRKIIWIVRKEKGEEEEDEHKYHKEGYEHKMEG 66
           +C   L  + ++Q KEI IG+EAS K K IW+VRK KGEEEEDE  +  +GYE +MEG
Sbjct: 286 ICFGSLAKFNSAQLKEIAIGVEASGK-KFIWVVRKGKGEEEEDEQNWLPKGYEQRMEG 342

[Close]
BLAST of Bhi10G001734 vs. NCBI nr
Match: XP_008454968.1 (PREDICTED: scopoletin glucosyltransferase-like [Cucumis melo])

HSP 1 Score: 55.8 bits (133), Expect = 6.4e-05
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 0 

Query: 8   LCIFVLELWPNSQQKEIKIGLEASVKRKIIWIVRKEKGEEEEDEHKYHKEGYEHKMEG 66
           +C   L  + ++Q KEI IG+EAS K K IW+VRK KGEEEEDE  +  +GYE +MEG
Sbjct: 286 ICFGSLAKFNSAQLKEIAIGVEASGK-KFIWVVRKGKGEEEEDEQNWLPKGYEQRMEG 342

The following BLAST results are available for this feature:
BLAST of Bhi10G001734 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi10G001734 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi10G001734 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BZB7|A0A1S3BZB7_CUCME4.2e-0555.17Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103495252 PE=3 SV=1[more]
BLAST of Bhi10G001734 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008454968.16.4e-0555.17PREDICTED: scopoletin glucosyltransferase-like [Cucumis melo][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M001734Bhi10M001734mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..67

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi10G001734Cucumber (Gy14) v1cgywgoB739
Bhi10G001734Cucumber (Gy14) v2cgybwgoB176
Bhi10G001734Cucurbita maxima (Rimu)cmawgoB0690
Bhi10G001734Cucurbita maxima (Rimu)cmawgoB0752
Bhi10G001734Cucurbita moschata (Rifu)cmowgoB0683
Bhi10G001734Cucurbita moschata (Rifu)cmowgoB0742
Bhi10G001734Cucurbita pepo (Zucchini)cpewgoB0366
Bhi10G001734Cucurbita pepo (Zucchini)cpewgoB0964
Bhi10G001734Wild cucumber (PI 183967)cpiwgoB172
Bhi10G001734Cucumber (Chinese Long) v3cucwgoB188
Bhi10G001734Cucumber (Chinese Long) v2cuwgoB175
Bhi10G001734Bottle gourd (USVL1VR-Ls)lsiwgoB082
Bhi10G001734Melon (DHL92) v3.6.1medwgoB118
Bhi10G001734Melon (DHL92) v3.5.1mewgoB117
Bhi10G001734Watermelon (Charleston Gray)wcgwgoB304
Bhi10G001734Watermelon (97103) v2wgowmbB374
Bhi10G001734Watermelon (97103) v1wgowmB400
Bhi10G001734Silver-seed gourdcarwgoB0498