Bhi10G000999 (gene) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCAGTCCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCCCACTGCAGCATACTTAATCAACAAAACACCTATGGTTTTACTATCCAACAACACTCCCTATGCTGTTCTGTTTAACAAAACTGTTGACTATGGCTTCATAAAGACATTCGGATGCCTTGCCTATGCTTCTACACCAACAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGGTATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAATCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCAGTTCGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAAGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCATACCACCCAACAACCATTCCCAGCAAGCCCCAAGAAG ATGTTTCAGTCCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCCCACTGCAGCATACTTAATCAACAAAACACCTATGGTTTTACTATCCAACAACACTCCCTATGCTGTTCTGTTTAACAAAACTGTTGACTATGGCTTCATAAAGACATTCGGATGCCTTGCCTATGCTTCTACACCAACAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGGTATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAATCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCAGTTCGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAAGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCATACCACCCAACAACCATTCCCAGCAAGCCCCAAGAAG ATGTTTCAGTCCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCCCACTGCAGCATACTTAATCAACAAAACACCTATGGTTTTACTATCCAACAACACTCCCTATGCTGTTCTGTTTAACAAAACTGTTGACTATGGCTTCATAAAGACATTCGGATGCCTTGCCTATGCTTCTACACCAACAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGGTATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAATCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCAGTTCGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAAGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCATACCACCCAACAACCATTCCCAGCAAGCCCCAAGAAG MFQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTPTVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPISHDFIDQFVIPSPLFDHFENKSITENLVVNTLERLCEDNHGIDDSQPHIETSEETNHTTQQPFPASPKK
BLAST of Bhi10G000999 vs. Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.1e-20 Identity = 52/132 (39.39%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of Bhi10G000999 vs. Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.0e-14 Identity = 41/132 (31.06%), Postives = 62/132 (46.97%), Query Frame = 0
BLAST of Bhi10G000999 vs. Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.2e-13 Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 0
BLAST of Bhi10G000999 vs. Swiss-Prot
Match: sp|P04146|COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 64.7 bits (156), Expect = 1.3e-09 Identity = 36/101 (35.64%), Postives = 53/101 (52.48%), Query Frame = 0
BLAST of Bhi10G000999 vs. TrEMBL
Match: tr|A0A2N9G3P0|A0A2N9G3P0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21852 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.5e-34 Identity = 77/145 (53.10%), Postives = 93/145 (64.14%), Query Frame = 0
BLAST of Bhi10G000999 vs. TrEMBL
Match: tr|A0A2N9IDW7|A0A2N9IDW7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51949 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.5e-34 Identity = 77/145 (53.10%), Postives = 93/145 (64.14%), Query Frame = 0
BLAST of Bhi10G000999 vs. TrEMBL
Match: tr|A0A2N9GBA0|A0A2N9GBA0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24383 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.5e-34 Identity = 77/145 (53.10%), Postives = 93/145 (64.14%), Query Frame = 0
BLAST of Bhi10G000999 vs. TrEMBL
Match: tr|A0A2N9FZR8|A0A2N9FZR8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20196 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 7.2e-34 Identity = 73/146 (50.00%), Postives = 99/146 (67.81%), Query Frame = 0
BLAST of Bhi10G000999 vs. TrEMBL
Match: tr|A0A2N9GUM1|A0A2N9GUM1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33958 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 9.4e-34 Identity = 65/112 (58.04%), Postives = 84/112 (75.00%), Query Frame = 0
BLAST of Bhi10G000999 vs. NCBI nr
Match: XP_022154919.1 (uncharacterized protein LOC111022065 [Momordica charantia]) HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33 Identity = 82/184 (44.57%), Postives = 105/184 (57.07%), Query Frame = 0
BLAST of Bhi10G000999 vs. NCBI nr
Match: XP_025692771.1 (uncharacterized protein LOC112795031 [Arachis hypogaea]) HSP 1 Score: 147.5 bits (371), Expect = 4.6e-32 Identity = 69/137 (50.36%), Postives = 93/137 (67.88%), Query Frame = 0
BLAST of Bhi10G000999 vs. NCBI nr
Match: CAB10225.1 (retrovirus-related like polyprotein [Arabidopsis thaliana] >CAB78488.1 retrovirus-related like polyprotein [Arabidopsis thaliana]) HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31 Identity = 71/170 (41.76%), Postives = 104/170 (61.18%), Query Frame = 0
BLAST of Bhi10G000999 vs. NCBI nr
Match: AAG10817.1 (Putative retroelement polyprotein [Arabidopsis thaliana]) HSP 1 Score: 144.8 bits (364), Expect = 3.0e-31 Identity = 65/133 (48.87%), Postives = 93/133 (69.92%), Query Frame = 0
BLAST of Bhi10G000999 vs. NCBI nr
Match: CAA72989.1 (unnamed protein product [Brassica oleracea var. viridis]) HSP 1 Score: 144.1 bits (362), Expect = 5.1e-31 Identity = 67/134 (50.00%), Postives = 88/134 (65.67%), Query Frame = 0
The following BLAST results are available for this feature:
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |