Bhi10M000999 (mRNA) Wax gourd

NameBhi10M000999
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr10 : 30583448 .. 30584020 (+)
Sequence length573
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCAGTCCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCCCACTGCAGCATACTTAATCAACAAAACACCTATGGTTTTACTATCCAACAACACTCCCTATGCTGTTCTGTTTAACAAAACTGTTGACTATGGCTTCATAAAGACATTCGGATGCCTTGCCTATGCTTCTACACCAACAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGGTATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAATCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCAGTTCGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAAGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCATACCACCCAACAACCATTCCCAGCAAGCCCCAAGAAG

mRNA sequence

ATGTTTCAGTCCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCCCACTGCAGCATACTTAATCAACAAAACACCTATGGTTTTACTATCCAACAACACTCCCTATGCTGTTCTGTTTAACAAAACTGTTGACTATGGCTTCATAAAGACATTCGGATGCCTTGCCTATGCTTCTACACCAACAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGGTATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAATCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCAGTTCGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAAGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCATACCACCCAACAACCATTCCCAGCAAGCCCCAAGAAG

Coding sequence (CDS)

ATGTTTCAGTCCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCCCACTGCAGCATACTTAATCAACAAAACACCTATGGTTTTACTATCCAACAACACTCCCTATGCTGTTCTGTTTAACAAAACTGTTGACTATGGCTTCATAAAGACATTCGGATGCCTTGCCTATGCTTCTACACCAACAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGGTATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAATCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCAGTTCGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAAGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCATACCACCCAACAACCATTCCCAGCAAGCCCCAAGAAG

Protein sequence

MFQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTPTVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPISHDFIDQFVIPSPLFDHFENKSITENLVVNTLERLCEDNHGIDDSQPHIETSEETNHTTQQPFPASPKK
BLAST of Bhi10M000999 vs. Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-20
Identity = 52/132 (39.39%), Postives = 76/132 (57.58%), Query Frame = 0

Query: 4   SNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTPTV 63
           + +P +FWGE + TA YLIN++P V L+   P  V  NK V Y  +K FGC A+A  P  
Sbjct: 603 AKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKE 662

Query: 64  NRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPIS 123
            R+K D ++ PC+F+GY     GY+L+D  K     SRDV+F E     ++  + ++ + 
Sbjct: 663 QRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESE--VRTAADMSEKVK 722

Query: 124 HDFIDQFV-IPS 135
           +  I  FV IPS
Sbjct: 723 NGIIPNFVTIPS 732

BLAST of Bhi10M000999 vs. Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-14
Identity = 41/132 (31.06%), Postives = 62/132 (46.97%), Query Frame = 0

Query: 4   SNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTPTV 63
           +++P T+W      A YLIN+ P  LL   +P+  LF  + +Y  ++ FGC  Y      
Sbjct: 643 ASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPY 702

Query: 64  NRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPIS 123
           N+ K D ++R CVF+GY      Y    +     +ISR V F E  FPF +      P+ 
Sbjct: 703 NQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQ 762

Query: 124 HDFIDQFVIPSP 136
               +   + SP
Sbjct: 763 EQRRESSCVWSP 774

BLAST of Bhi10M000999 vs. Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-13
Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 0

Query: 4   SNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTPTV 63
           ++VP T+W      A YLIN+ P  LL   +P+  LF +  +Y  +K FGC  Y      
Sbjct: 622 ASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPY 681

Query: 64  NRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQS 115
           NR K + +++ C FMGY      Y    +     + SR V F E  FPF +
Sbjct: 682 NRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFST 732

BLAST of Bhi10M000999 vs. Swiss-Prot
Match: sp|P04146|COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-09
Identity = 36/101 (35.64%), Postives = 53/101 (52.48%), Query Frame = 0

Query: 9   TFWGECIPTAAYLINKTPMVLL--SNNTPYAVLFNKTVDYGFIKTFGCLAYASTPTVNRS 68
           +FWGE + TA YLIN+ P   L  S+ TPY +  NK      ++ FG   Y       + 
Sbjct: 608 SFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKN-KQG 667

Query: 69  KFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFE 108
           KFD ++   +F+GY     G+KL+D     F ++RDV+  E
Sbjct: 668 KFDDKSFKSIFVGYEP--NGFKLWDAVNEKFIVARDVVVDE 705

BLAST of Bhi10M000999 vs. TrEMBL
Match: tr|A0A2N9G3P0|A0A2N9G3P0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21852 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.5e-34
Identity = 77/145 (53.10%), Postives = 93/145 (64.14%), Query Frame = 0

Query: 2   FQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTP 61
           FQSN+P+ FWG CI TA YLIN+ P  +LSN +PY  L +K   Y  +K FGCL YAST 
Sbjct: 683 FQSNLPIQFWGNCIQTAVYLINRLPCPILSNKSPYEALLHKLPTYSHLKVFGCLCYASTL 742

Query: 62  TVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKE---- 121
           T +R+KFDPRA PCVF+GYP  +KGYKL ++    + ISRDV+F E  FPFQS       
Sbjct: 743 TAHRTKFDPRAIPCVFLGYPPDVKGYKLLNLATHQYLISRDVVFHESVFPFQSTTSHVSD 802

Query: 122 -DNKPISHDFIDQFVIPSPLFDHFE 142
             N   SHDF  Q    S LF+ FE
Sbjct: 803 FPNVDTSHDFCSQ-QNTSMLFNSFE 826

BLAST of Bhi10M000999 vs. TrEMBL
Match: tr|A0A2N9IDW7|A0A2N9IDW7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51949 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.5e-34
Identity = 77/145 (53.10%), Postives = 93/145 (64.14%), Query Frame = 0

Query: 2   FQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTP 61
           FQSN+P+ FWG CI TA YLIN+ P  +LSN +PY  L +K   Y  +K FGCL YAST 
Sbjct: 403 FQSNLPIQFWGNCIQTAVYLINRLPCPILSNKSPYEALLHKLPTYSHLKVFGCLCYASTL 462

Query: 62  TVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKE---- 121
           T +R+KFDPRA PCVF+GYP  +KGYKL ++    + ISRDV+F E  FPFQS       
Sbjct: 463 TAHRTKFDPRAIPCVFLGYPPDVKGYKLLNLATHQYLISRDVVFHESVFPFQSTTSHASD 522

Query: 122 -DNKPISHDFIDQFVIPSPLFDHFE 142
             N   SHDF  Q    S LF+ FE
Sbjct: 523 FPNVDTSHDFCSQ-QNTSMLFNSFE 546

BLAST of Bhi10M000999 vs. TrEMBL
Match: tr|A0A2N9GBA0|A0A2N9GBA0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24383 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.5e-34
Identity = 77/145 (53.10%), Postives = 93/145 (64.14%), Query Frame = 0

Query: 2   FQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTP 61
           FQSN+P+ FWG CI TA YLIN+ P  +LSN +PY  L +K   Y  +K FGCL YAST 
Sbjct: 684 FQSNLPIQFWGNCIQTAVYLINRLPCPILSNKSPYEALLHKLPTYSHLKVFGCLCYASTL 743

Query: 62  TVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKE---- 121
           T +R+KFDPRA PCVF+GYP  +KGYKL ++    + ISRDV+F E  FPFQS       
Sbjct: 744 TAHRTKFDPRAIPCVFLGYPPDVKGYKLLNLATHQYLISRDVVFHESVFPFQSTTSHVSD 803

Query: 122 -DNKPISHDFIDQFVIPSPLFDHFE 142
             N   SHDF  Q    S LF+ FE
Sbjct: 804 FPNVDTSHDFYSQ-KNTSMLFNSFE 827

BLAST of Bhi10M000999 vs. TrEMBL
Match: tr|A0A2N9FZR8|A0A2N9FZR8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20196 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.2e-34
Identity = 73/146 (50.00%), Postives = 99/146 (67.81%), Query Frame = 0

Query: 2    FQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTP 61
            FQSNVP+ +WG+C+ TA YLIN+ P  +LSN +PY +L +K  +Y  +++FGCL YA+T 
Sbjct: 951  FQSNVPIKYWGDCVLTAVYLINRLPSPILSNKSPYELLLHKVPNYSHLRSFGCLCYAATL 1010

Query: 62   TVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSV--KEDN 121
            + +R+KFDPRAR CVF+GYP GIKGYKL D+    +F+SRDV+F E  FPF+S+    D 
Sbjct: 1011 SNHRTKFDPRARACVFVGYPPGIKGYKLLDLNNHQYFVSRDVVFHEHIFPFKSLNPNSDV 1070

Query: 122  KPISHDFIDQFVIPSPLFDHFENKSI 146
                +  I   +I SP  D F N  I
Sbjct: 1071 SSFLNPTIPPPIISSPT-DSFSNPDI 1095

BLAST of Bhi10M000999 vs. TrEMBL
Match: tr|A0A2N9GUM1|A0A2N9GUM1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33958 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.4e-34
Identity = 65/112 (58.04%), Postives = 84/112 (75.00%), Query Frame = 0

Query: 2   FQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTP 61
           FQ+++P+ FWG+C+ TA YLIN+ P  LLS+ +PY  L +K   Y  +K FGCL +AST 
Sbjct: 549 FQAHLPIRFWGDCVLTAVYLINRLPSPLLSSKSPYECLLHKPPSYSHLKVFGCLCFASTL 608

Query: 62  TVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQ 114
           TV R KFDPRA+PCVF+GYP+ +KGYKLYD+    FF+SRDV+F E  FPFQ
Sbjct: 609 TVGRHKFDPRAKPCVFLGYPASVKGYKLYDLASHQFFVSRDVVFHETTFPFQ 660

BLAST of Bhi10M000999 vs. NCBI nr
Match: XP_022154919.1 (uncharacterized protein LOC111022065 [Momordica charantia])

HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33
Identity = 82/184 (44.57%), Postives = 105/184 (57.07%), Query Frame = 0

Query: 2   FQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTP 61
           FQS VP  FWGEC+ TAAYLIN+TP  +L  NTPYA L+  + DY  +K FGCL + ST 
Sbjct: 434 FQSRVPTAFWGECVLTAAYLINRTPTPVLDWNTPYARLYGHSADYSSLKVFGCLCFVSTS 493

Query: 62  TVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKP 121
            VNRSKF PRA   VF+GYP G+KGYKLYD+    FF+SRDV+F E  FPF +V      
Sbjct: 494 PVNRSKFHPRALTSVFVGYPPGMKGYKLYDIENKRFFVSRDVIFHESIFPFHTVS----- 553

Query: 122 ISHDFIDQFVIPSPLFDHFENKSITENL-VVNTLERLCEDNHGIDDSQPHIETSEETNHT 181
                     + SP+ D F    I ++  +V+T     +D+H          TS + + T
Sbjct: 554 ----------VNSPIVDPFPGVVIPKSYDLVDTSSGAPDDHHNYATGSAVSPTSADISPT 602

Query: 182 TQQP 185
              P
Sbjct: 614 VVIP 602

BLAST of Bhi10M000999 vs. NCBI nr
Match: XP_025692771.1 (uncharacterized protein LOC112795031 [Arachis hypogaea])

HSP 1 Score: 147.5 bits (371), Expect = 4.6e-32
Identity = 69/137 (50.36%), Postives = 93/137 (67.88%), Query Frame = 0

Query: 2   FQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYASTP 61
           FQS VP+TFWGEC+ TAA+LIN+TP  LL   +P+ +LF K+ +Y  +K FGCLAYA+T 
Sbjct: 479 FQSQVPITFWGECVSTAAFLINRTPSPLLKMKSPFELLFEKSPNYKAMKIFGCLAYATTN 538

Query: 62  TVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKP 121
           T +R KFDPRA   VF GYP G KGYKLY++    F IS DV+F E+  PF   +  +  
Sbjct: 539 TSSRLKFDPRADTTVFFGYPLGYKGYKLYNLRTKQFLISMDVIFHEDTMPF--AQNPHTQ 598

Query: 122 ISHDFIDQFVIPSPLFD 139
           +++D     V+P+P+ D
Sbjct: 599 LNNDIFFDVVLPNPILD 613

BLAST of Bhi10M000999 vs. NCBI nr
Match: CAB10225.1 (retrovirus-related like polyprotein [Arabidopsis thaliana] >CAB78488.1 retrovirus-related like polyprotein [Arabidopsis thaliana])

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 71/170 (41.76%), Postives = 104/170 (61.18%), Query Frame = 0

Query: 1   MFQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYAST 60
           +FQSN+P+ +W +C+ TA +LIN+ P  LL+N +PY ++ NK  DY  +K FGCL + ST
Sbjct: 749 LFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPYELILNKQPDYSLLKNFGCLCFVST 808

Query: 61  PTVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNK 120
               R+KF PRAR CVF+GYPSG KGYK+ D+   +  +SR+V+F E  FPF++ +  NK
Sbjct: 809 NAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSVTVSRNVVFKEHVFPFKTSELLNK 868

Query: 121 PISHDFIDQFVIPSPLFDHF-ENKSI--TENLVVNTLERLCEDNHGIDDS 168
            +  D     ++P P   HF E   +   ++L+  T +    DNH    S
Sbjct: 869 AV--DMFPNSILPLPAPLHFVETMPLIDEDSLIPTTTDSRTADNHASSSS 916

BLAST of Bhi10M000999 vs. NCBI nr
Match: AAG10817.1 (Putative retroelement polyprotein [Arabidopsis thaliana])

HSP 1 Score: 144.8 bits (364), Expect = 3.0e-31
Identity = 65/133 (48.87%), Postives = 93/133 (69.92%), Query Frame = 0

Query: 1   MFQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYAST 60
           +FQS +PL++WG+CI TA ++IN+TP  ++SN T + +L  K  DY  +K+FGCL YAST
Sbjct: 706 LFQSQIPLSYWGDCILTAVFIINRTPSPVISNKTLFEMLTKKVPDYTHLKSFGCLCYAST 765

Query: 61  PTVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNK 120
               R KF+ RAR C F+GYPSG KGYKL D+   T FISR+V+F+E+ FPF++   +N+
Sbjct: 766 SPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVFYEDLFPFKTKPAENE 825

Query: 121 PIS----HDFIDQ 130
             S    H ++D+
Sbjct: 826 ESSVFFPHIYVDR 838

BLAST of Bhi10M000999 vs. NCBI nr
Match: CAA72989.1 (unnamed protein product [Brassica oleracea var. viridis])

HSP 1 Score: 144.1 bits (362), Expect = 5.1e-31
Identity = 67/134 (50.00%), Postives = 88/134 (65.67%), Query Frame = 0

Query: 1   MFQSNVPLTFWGECIPTAAYLINKTPMVLLSNNTPYAVLFNKTVDYGFIKTFGCLAYAST 60
           MFQS VPL +WG+C+ TAA+LIN+TP  LL+N +PY VL  K   Y  ++TFGCL Y ST
Sbjct: 690 MFQSQVPLQYWGDCVLTAAFLINRTPSPLLANKSPYEVLMGKAPQYDQLRTFGCLCYGST 749

Query: 61  PTVNRSKFDPRARPCVFMGYPSGIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNK 120
               R KF PR+R CVF+GYPSG KGYKL D+     +ISR+V F E+ FP    ++ ++
Sbjct: 750 SPKQRHKFMPRSRACVFLGYPSGYKGYKLLDLESNKIYISRNVTFHEDIFPMAKHQKMDE 809

Query: 121 PISHDFIDQFVIPS 135
              H F  +  +PS
Sbjct: 810 SSLHFFPPKVTVPS 823

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
sp|P10978|POLX_TOBAC2.1e-2039.39Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
sp|Q94HW2|POLR1_ARATH1.0e-1431.06Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
sp|Q9ZT94|POLR2_ARATH4.2e-1334.23Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
sp|P04146|COPIA_DROME1.3e-0935.64Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Match NameE-valueIdentityDescription
tr|A0A2N9G3P0|A0A2N9G3P0_FAGSY2.5e-3453.10Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21852 PE=4 SV=1[more]
tr|A0A2N9IDW7|A0A2N9IDW7_FAGSY2.5e-3453.10Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51949 PE=4 SV=1[more]
tr|A0A2N9GBA0|A0A2N9GBA0_FAGSY2.5e-3453.10Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24383 PE=4 SV=1[more]
tr|A0A2N9FZR8|A0A2N9FZR8_FAGSY7.2e-3450.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20196 PE=4 SV=1[more]
tr|A0A2N9GUM1|A0A2N9GUM1_FAGSY9.4e-3458.04Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33958 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022154919.13.2e-3344.57uncharacterized protein LOC111022065 [Momordica charantia][more]
XP_025692771.14.6e-3250.36uncharacterized protein LOC112795031 [Arachis hypogaea][more]
CAB10225.11.0e-3141.76retrovirus-related like polyprotein [Arabidopsis thaliana] >CAB78488.1 retroviru... [more]
AAG10817.13.0e-3148.87Putative retroelement polyprotein [Arabidopsis thaliana][more]
CAA72989.15.1e-3150.00unnamed protein product [Brassica oleracea var. viridis][more]

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi10G000999Bhi10G000999gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi10M000999.exon1Bhi10M000999.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi10M000999cds.Bhi10M000999CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi10M000999Bhi10M000999-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..191
NoneNo IPR availablePANTHERPTHR11439:SF234SUBFAMILY NOT NAMEDcoord: 4..125
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..125