Bhi06G001319 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi06G001319
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Cell wall-associated hydrolase
Location	chr6 : 44557976 .. 44558343 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCGAACTGTCTCACGACGTTCTGAACCCAGTTCACGTACCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCCTCAGGTGGCGAAGAGCCGACATTGAGGTGCCAAACCTTCCCATCGATGTGAGCTCTTGGGGAAGATCAGCTTGTTATCCCTAGAGTAACTTTTATCCGTAGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTTGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTTGAGGGCCAATCTCTGTCTGGCCTGAGGAAACCTTTGCACACCTCCGTTACCTTTTGGGAGGCCTACGCCCTATAG

mRNA sequence

ATGAACCGAACTGTCTCACGACGTTCTGAACCCAGTTCACGTACCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCCTCAGCTTGTTATCCCTAGAGTAACTTTTATCCGTAGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTTGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTTGAGGGCCAATCTCTGTCTGGCCTGAGGAAACCTTTGCACACCTCCGTTACCTTTTGGGAGGCCTACGCCCTATAG

Coding sequence (CDS)

ATGAACCGAACTGTCTCACGACGTTCTGAACCCAGTTCACGTACCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCCTCAGCTTGTTATCCCTAGAGTAACTTTTATCCGTAGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTTGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTTGAGGGCCAATCTCTGTCTGGCCTGAGGAAACCTTTGCACACCTCCGTTACCTTTTGGGAGGCCTACGCCCTATAG

Protein sequence

MNRTVSRRSEPSSRTALMGEQPNPWNILQPQLVIPRVTFIRRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYAL

Homology

[Close]

BLAST of Bhi06G001319 vs. TrEMBL
Match: tr|A0A2N9GA72|A0A2N9GA72_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23936 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = 0


Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAY 99
           RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQS SG RKPLH SVTFWEAY
Sbjct: 122 RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAY 178

[Close]

BLAST of Bhi06G001319 vs. TrEMBL
Match: tr|W9RPF7|W9RPF7_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018827 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-20
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           RATALP GTVGSLRPTFVPARRVGLAVKLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 80  RATALPPGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 137

[Close]

BLAST of Bhi06G001319 vs. TrEMBL
Match: tr|A0A2N9IVY3|A0A2N9IVY3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57409 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-18
Identity = 50/53 (94.34%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 47  PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 27  PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 79

[Close]

BLAST of Bhi06G001319 vs. TrEMBL
Match: tr|W9SEP0|W9SEP0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000614 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.8e-18
Identity = 51/58 (87.93%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           RATALP GTVGSLR TFVPAR VGLA+KLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 124 RATALPPGTVGSLRLTFVPARWVGLAIKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 181

[Close]

BLAST of Bhi06G001319 vs. TrEMBL
Match: tr|A0A2P5SF32|A0A2P5SF32_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD05319 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.2e-17
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 13  SRTALMGEQPNPWNILQPQLVIPRVTFIRRATALPLGTVGSLRPTFVPARRVGLAVKLPS 72
           SR ALMG+QPNPWNILQPQ+V  R     RATALPLGT+GSLR TFVP R VGLAVKLPS
Sbjct: 120 SRMALMGKQPNPWNILQPQVVKSR----HRATALPLGTIGSLRLTFVPVRPVGLAVKLPS 179

Query: 73  AFALEGQSLS 83
            FALEGQS S
Sbjct: 180 -FALEGQSPS 184

[Close]

BLAST of Bhi06G001319 vs. NCBI nr
Match: KZV45021.1 (Metallocarboxypeptidase inhibitor [Dorcoceras hygrometricum])

HSP 1 Score: 109.8 bits (273), Expect = 5.5e-21
Identity = 55/58 (94.83%), Postives = 55/58 (94.83%), Query Frame = 0


Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 122 RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 179

[Close]

BLAST of Bhi06G001319 vs. NCBI nr
Match: EXC01915.1 (hypothetical protein L484_018827 [Morus notabilis])

HSP 1 Score: 107.1 bits (266), Expect = 3.6e-20
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           RATALP GTVGSLRPTFVPARRVGLAVKLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 80  RATALPPGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 137

[Close]

BLAST of Bhi06G001319 vs. NCBI nr
Match: EXC50692.1 (hypothetical protein L484_000614 [Morus notabilis])

HSP 1 Score: 99.8 bits (247), Expect = 5.7e-18
Identity = 51/58 (87.93%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           RATALP GTVGSLR TFVPAR VGLA+KLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 124 RATALPPGTVGSLRLTFVPARWVGLAIKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 181

[Close]

BLAST of Bhi06G001319 vs. NCBI nr
Match: PPD97659.1 (hypothetical protein GOBAR_DD05319 [Gossypium barbadense])

HSP 1 Score: 96.3 bits (238), Expect = 6.3e-17
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 13  SRTALMGEQPNPWNILQPQLVIPRVTFIRRATALPLGTVGSLRPTFVPARRVGLAVKLPS 72
           SR ALMG+QPNPWNILQPQ+V  R     RATALPLGT+GSLR TFVP R VGLAVKLPS
Sbjct: 120 SRMALMGKQPNPWNILQPQVVKSR----HRATALPLGTIGSLRLTFVPVRPVGLAVKLPS 179

Query: 73  AFALEGQSLS 83
            FALEGQS S
Sbjct: 180 -FALEGQSPS 184

[Close]

BLAST of Bhi06G001319 vs. NCBI nr
Match: KHN03664.1 (hypothetical protein glysoja_035407 [Glycine soja])

HSP 1 Score: 89.0 bits (219), Expect = 1.0e-14
Identity = 46/55 (83.64%), Postives = 48/55 (87.27%), Query Frame = 0


Query: 45  ALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           ALPLG V SLRPTFV  RRVGLA+KLPSAFALEGQ+ SGLRKPLH SVTF EAYA
Sbjct: 2   ALPLGIVRSLRPTFVHNRRVGLAIKLPSAFALEGQTPSGLRKPLHASVTFREAYA 56

The following BLAST results are available for this feature:

BLAST of Bhi06G001319 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi06G001319 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi06G001319 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2N9GA72\|A0A2N9GA72_FAGSY	1.1e-20	94.74	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23936 PE=4 SV=1	[more]
tr\|W9RPF7\|W9RPF7_9ROSA	2.4e-20	93.10	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018827 PE=4 SV=1	[more]
tr\|A0A2N9IVY3\|A0A2N9IVY3_FAGSY	1.3e-18	94.34	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57409 PE=4 SV=1	[more]
tr\|W9SEP0\|W9SEP0_9ROSA	3.8e-18	87.93	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000614 PE=4 SV=1	[more]
tr\|A0A2P5SF32\|A0A2P5SF32_GOSBA	4.2e-17	77.14	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD05319 PE=4 SV...	[more]

BLAST of Bhi06G001319 vs. NCBI nr


Match Name	E-value	Identity	Description
KZV45021.1	5.5e-21	94.83	Metallocarboxypeptidase inhibitor [Dorcoceras hygrometricum]	[more]
EXC01915.1	3.6e-20	93.10	hypothetical protein L484_018827 [Morus notabilis]	[more]
EXC50692.1	5.7e-18	87.93	hypothetical protein L484_000614 [Morus notabilis]	[more]
PPD97659.1	6.3e-17	77.14	hypothetical protein GOBAR_DD05319 [Gossypium barbadense]	[more]
KHN03664.1	1.0e-14	83.64	hypothetical protein glysoja_035407 [Glycine soja]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M001319	Bhi06M001319	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi06G001319	Cucumber (Gy14) v1	cgywgoB115
Bhi06G001319	Cucumber (Gy14) v2	cgybwgoB124
Bhi06G001319	Cucurbita maxima (Rimu)	cmawgoB0182
Bhi06G001319	Cucurbita maxima (Rimu)	cmawgoB0470
Bhi06G001319	Cucurbita maxima (Rimu)	cmawgoB0927
Bhi06G001319	Cucurbita moschata (Rifu)	cmowgoB0179
Bhi06G001319	Cucurbita moschata (Rifu)	cmowgoB0469
Bhi06G001319	Cucurbita moschata (Rifu)	cmowgoB0928
Bhi06G001319	Cucurbita pepo (Zucchini)	cpewgoB0124
Bhi06G001319	Cucurbita pepo (Zucchini)	cpewgoB0186
Bhi06G001319	Cucurbita pepo (Zucchini)	cpewgoB1015
Bhi06G001319	Wild cucumber (PI 183967)	cpiwgoB129
Bhi06G001319	Cucumber (Chinese Long) v3	cucwgoB136
Bhi06G001319	Cucumber (Chinese Long) v2	cuwgoB128
Bhi06G001319	Bottle gourd (USVL1VR-Ls)	lsiwgoB038
Bhi06G001319	Bottle gourd (USVL1VR-Ls)	lsiwgoB101
Bhi06G001319	Melon (DHL92) v3.6.1	medwgoB274
Bhi06G001319	Melon (DHL92) v3.6.1	medwgoB461
Bhi06G001319	Melon (DHL92) v3.5.1	mewgoB274
Bhi06G001319	Melon (DHL92) v3.5.1	mewgoB459
Bhi06G001319	Watermelon (Charleston Gray)	wcgwgoB262
Bhi06G001319	Watermelon (Charleston Gray)	wcgwgoB515
Bhi06G001319	Watermelon (97103) v2	wgowmbB130
Bhi06G001319	Watermelon (97103) v2	wgowmbB144
Bhi06G001319	Watermelon (97103) v1	wgowmB135
Bhi06G001319	Watermelon (97103) v1	wgowmB159
Bhi06G001319	Silver-seed gourd	carwgoB0085
Bhi06G001319	Silver-seed gourd	carwgoB0672
Bhi06G001319	Silver-seed gourd	carwgoB1029