Bhi06M001319 (mRNA) Wax gourd

NameBhi06M001319
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionCell wall-associated hydrolase
Locationchr6 : 44557976 .. 44558343 (+)
Sequence length303
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCGAACTGTCTCACGACGTTCTGAACCCAGTTCACGTACCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCCTCAGGTGGCGAAGAGCCGACATTGAGGTGCCAAACCTTCCCATCGATGTGAGCTCTTGGGGAAGATCAGCTTGTTATCCCTAGAGTAACTTTTATCCGTAGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTTGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTTGAGGGCCAATCTCTGTCTGGCCTGAGGAAACCTTTGCACACCTCCGTTACCTTTTGGGAGGCCTACGCCCTATAG

mRNA sequence

ATGAACCGAACTGTCTCACGACGTTCTGAACCCAGTTCACGTACCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCCTCAGCTTGTTATCCCTAGAGTAACTTTTATCCGTAGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTTGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTTGAGGGCCAATCTCTGTCTGGCCTGAGGAAACCTTTGCACACCTCCGTTACCTTTTGGGAGGCCTACGCCCTATAG

Coding sequence (CDS)

ATGAACCGAACTGTCTCACGACGTTCTGAACCCAGTTCACGTACCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCCTCAGCTTGTTATCCCTAGAGTAACTTTTATCCGTAGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTTGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTTGAGGGCCAATCTCTGTCTGGCCTGAGGAAACCTTTGCACACCTCCGTTACCTTTTGGGAGGCCTACGCCCTATAG

Protein sequence

MNRTVSRRSEPSSRTALMGEQPNPWNILQPQLVIPRVTFIRRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYAL
BLAST of Bhi06M001319 vs. TrEMBL
Match: tr|A0A2N9GA72|A0A2N9GA72_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23936 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = 0

Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAY 99
           RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQS SG RKPLH SVTFWEAY
Sbjct: 122 RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAY 178

BLAST of Bhi06M001319 vs. TrEMBL
Match: tr|W9RPF7|W9RPF7_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018827 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-20
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0

Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           RATALP GTVGSLRPTFVPARRVGLAVKLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 80  RATALPPGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 137

BLAST of Bhi06M001319 vs. TrEMBL
Match: tr|A0A2N9IVY3|A0A2N9IVY3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57409 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-18
Identity = 50/53 (94.34%), Postives = 50/53 (94.34%), Query Frame = 0

Query: 47  PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 27  PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 79

BLAST of Bhi06M001319 vs. TrEMBL
Match: tr|W9SEP0|W9SEP0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000614 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.8e-18
Identity = 51/58 (87.93%), Postives = 52/58 (89.66%), Query Frame = 0

Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           RATALP GTVGSLR TFVPAR VGLA+KLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 124 RATALPPGTVGSLRLTFVPARWVGLAIKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 181

BLAST of Bhi06M001319 vs. TrEMBL
Match: tr|A0A2P5SF32|A0A2P5SF32_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD05319 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.2e-17
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0

Query: 13  SRTALMGEQPNPWNILQPQLVIPRVTFIRRATALPLGTVGSLRPTFVPARRVGLAVKLPS 72
           SR ALMG+QPNPWNILQPQ+V  R     RATALPLGT+GSLR TFVP R VGLAVKLPS
Sbjct: 120 SRMALMGKQPNPWNILQPQVVKSR----HRATALPLGTIGSLRLTFVPVRPVGLAVKLPS 179

Query: 73  AFALEGQSLS 83
            FALEGQS S
Sbjct: 180 -FALEGQSPS 184

BLAST of Bhi06M001319 vs. NCBI nr
Match: KZV45021.1 (Metallocarboxypeptidase inhibitor [Dorcoceras hygrometricum])

HSP 1 Score: 109.8 bits (273), Expect = 5.5e-21
Identity = 55/58 (94.83%), Postives = 55/58 (94.83%), Query Frame = 0

Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 122 RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 179

BLAST of Bhi06M001319 vs. NCBI nr
Match: EXC01915.1 (hypothetical protein L484_018827 [Morus notabilis])

HSP 1 Score: 107.1 bits (266), Expect = 3.6e-20
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0

Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           RATALP GTVGSLRPTFVPARRVGLAVKLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 80  RATALPPGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 137

BLAST of Bhi06M001319 vs. NCBI nr
Match: EXC50692.1 (hypothetical protein L484_000614 [Morus notabilis])

HSP 1 Score: 99.8 bits (247), Expect = 5.7e-18
Identity = 51/58 (87.93%), Postives = 52/58 (89.66%), Query Frame = 0

Query: 42  RATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           RATALP GTVGSLR TFVPAR VGLA+KLPSAFALEGQS SG RKPLH SVTFWEAYA
Sbjct: 124 RATALPPGTVGSLRLTFVPARWVGLAIKLPSAFALEGQSPSGPRKPLHASVTFWEAYA 181

BLAST of Bhi06M001319 vs. NCBI nr
Match: PPD97659.1 (hypothetical protein GOBAR_DD05319 [Gossypium barbadense])

HSP 1 Score: 96.3 bits (238), Expect = 6.3e-17
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0

Query: 13  SRTALMGEQPNPWNILQPQLVIPRVTFIRRATALPLGTVGSLRPTFVPARRVGLAVKLPS 72
           SR ALMG+QPNPWNILQPQ+V  R     RATALPLGT+GSLR TFVP R VGLAVKLPS
Sbjct: 120 SRMALMGKQPNPWNILQPQVVKSR----HRATALPLGTIGSLRLTFVPVRPVGLAVKLPS 179

Query: 73  AFALEGQSLS 83
            FALEGQS S
Sbjct: 180 -FALEGQSPS 184

BLAST of Bhi06M001319 vs. NCBI nr
Match: KHN03664.1 (hypothetical protein glysoja_035407 [Glycine soja])

HSP 1 Score: 89.0 bits (219), Expect = 1.0e-14
Identity = 46/55 (83.64%), Postives = 48/55 (87.27%), Query Frame = 0

Query: 45  ALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSLSGLRKPLHTSVTFWEAYA 100
           ALPLG V SLRPTFV  RRVGLA+KLPSAFALEGQ+ SGLRKPLH SVTF EAYA
Sbjct: 2   ALPLGIVRSLRPTFVHNRRVGLAIKLPSAFALEGQTPSGLRKPLHASVTFREAYA 56

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A2N9GA72|A0A2N9GA72_FAGSY1.1e-2094.74Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23936 PE=4 SV=1[more]
tr|W9RPF7|W9RPF7_9ROSA2.4e-2093.10Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018827 PE=4 SV=1[more]
tr|A0A2N9IVY3|A0A2N9IVY3_FAGSY1.3e-1894.34Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57409 PE=4 SV=1[more]
tr|W9SEP0|W9SEP0_9ROSA3.8e-1887.93Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000614 PE=4 SV=1[more]
tr|A0A2P5SF32|A0A2P5SF32_GOSBA4.2e-1777.14Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD05319 PE=4 SV... [more]
Match NameE-valueIdentityDescription
KZV45021.15.5e-2194.83Metallocarboxypeptidase inhibitor [Dorcoceras hygrometricum][more]
EXC01915.13.6e-2093.10hypothetical protein L484_018827 [Morus notabilis][more]
EXC50692.15.7e-1887.93hypothetical protein L484_000614 [Morus notabilis][more]
PPD97659.16.3e-1777.14hypothetical protein GOBAR_DD05319 [Gossypium barbadense][more]
KHN03664.11.0e-1483.64hypothetical protein glysoja_035407 [Glycine soja][more]
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast
molecular_function GO:0016787 hydrolase activity

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi06G001319Bhi06G001319gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi06M001319.exon1Bhi06M001319.exon1exon
Bhi06M001319.exon2Bhi06M001319.exon2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi06M001319cds.Bhi06M001319CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi06M001319Bhi06M001319-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22