Cla97C03G062290 (gene) Watermelon (97103) v2

Overview
NameCla97C03G062290
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr03 : 23174838 .. 23178093 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTGATTCAATATGAAAAGGCCAGCACTCACTCTTCAGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGGTACTTCTACCGCATCAAAAAGGTACCTTCGAGCTCAGCTTTGTCATCTAGCTCGGGCTGTTCAAAAAGAAAAAGAGGTTCCAACTAAGAAGAACCGAACCTGAGGGGGAGCCACATAAAAAGAGATTCTAAACAAAATGTGAGCTGCAGCCGAACTCGTTGCAAGAAAAGGTAGTTGAATGTGTTAGGCGAAGAGAATATAGCACGTAGAAGCAACTAGAGTCGGCAGTTCGACGGCTTAATGCTTGCCAGAGATAGTTCTATAGCCCTTAGGATAAAGACATGAGCATAGGATTTCAGAGGAGCCCAAGGAGGTTTCACGATCCGATCTCTCACTTGAAGAAAGATAGCCTAGCTATAGAAAAAGGATGCAATGATGAGAAAGTTCTTTTTTCATTGTAACGCTAAGGTGGACAAGACCTTACAACTAGAAAAGGGGGCAAAATCACAAGTTATCTTTAGAAAATTGGGATCTCCTTGATGATCCTCCTTTCATCACAGAGGGGCAGAAGATGAGTTGGGAGTTTCATCGAGATTACTATCACTCGTCCTAACCTCTCATATGTTGTGGGGATTGGTTGTCAATGTATGTTATGCTATCTCCGCAGAAGTGAAATTTGGATGAACTCAAAAAGATCCTCAGGTATATAAAGAAAGACCCACCCTAAAAAAAAGGCATTCTTTTATCGGTAAGCAAAAGGATCCTTGCTTCGGGCAACTTAGGGCCTATTCAGATGCTGCCCCTACCTATGAAAGCTGAAGGAAGGTATTAATGCTGGCTTTCTCTCTGATAGAAAATCAACCATAGGCAAATTGATTCCCTGGAAAAGCAAAAAGAAAGGGGACTTCTTCTTCCCAGCCAGAAGCAAGCATAGCTTAGGCATAGGATTCCACATCCGTATCAGAAGTGCAAAAATTATTCGCACACCCCCCTCTCCCTATCGGTAAAGCTGCTTCGCTCCTCCCCTGAATTCAAAAAAAAGAAGATGAGGCTTTTGCTATGCCACCAGAATTGTGTAGTTAGAGTTATCCCCTTACACTGGGAGTGCTGCTCAAGCGCACAGGTCTGGATCTTGAATCGGATGATGAATTCTCTTCTGGAAAAGGAACTACAACCTATGCCCACTAAAACCCACCGCCCTTATACCGCGCCGTGCATATAGAAAGAAAGAATAGACTCTATTCCCCCAAAAAGGTTATACTAAGTGCAATTCCTTAGCTATTTCTAGTGGTCTTGTTTCCATTCCTCTAGAAGGGTATTGGCATCAAAAAGAGGGCCTAATGCGCCCGGAACTATGGCACCGAAACGGGTCTGCGGGCCGGCAACCCGACCAGCTAAGAGCAACTCCAAGCTTGAGGAAGAATACGATATCACTAAAGCAACCGTCGAAATGAAAGCAAGGCCTAATTGCTTGCTGCACTTCGCGCGCAGGAACGGATCTTAGCCAATGACCGGCTTAGGCCGAGAGCACCAGTAGGCGCGCGTAGGTGGGTTCTCCCCTATTTTTGGGCTGCTAAACTTGGCTCAGTGAGTCTATGAACTGATACAGATTCATTGAAATAGCATATATAGAATGAAGGACTGATACCGAAGGAACTCGAACAAGAACAAACAATTGAAAAGAAATAGCAACTATTTAATTAACTACGGAGTAAAGAAAGATTGAACGGAACATTTCATTTCTTTTATTCTATTCTATCTTTAGTTACAGTCCGCTCTAGAAAGTCACTGATAGCTTCTTCTCGCGATGAGACAGAGTACACTGATATCGATGAGAGGTATAGAATTACAGACAGAGTGAGATGTAGAACCTGTACTAGATTGAAAGAATCAATGGCAATAGAATTCCTGCTCAGGTTAAATGTAACTCTAAGGCACTTGTTGATGCGCTACTACTATCAGTTCTACTTTAGCAGTTAGGATTTATTTGACTTAGCAGCCTTAGCTTTAGACTAGCCCTTCTGGAAAGAGATTCAATAGCACCGGTCAAAGAGCTAGCAATGACTTTCTTCCCACCCGGAGTGATGGTTAGGCCACGGCCAAGAGAACCCTTCAGATACCGTAAGATGCGTTTTACAGCCTGGAGATGTACGATGGTGAAAGCGTGCATGAACTGACAAACTTGATTGAAAGCATAGCGGATGTCAGGTCTGGTGAGAGTGAGGTACTGAAGGGCGCCAACAATGCTACGAGATTCTGTTGCATCAGAGAGAGGAGCACCATCGTATGCAGAGAGCTTTGAGCCAGACGCAAGGTGTGTGCCGCTGTTTTCTTTCCTATATTTTCCACTTTGCAGGTAAGAACTATCGGCAGACGAAAGAGAACTTATTTAGACGAAAAGTGTGCCGGTGCCATTACCCCAAAAAACCCTACATTAGCTGTTCGGGTGGAATCAGACATAAACCAAGTCCAAGAAGACCGAGGAGGCCTTGGGGGGAAGGTAGCGCACTAATTCGATTCTCCTTTCCTGCTACTAGGGAAGCGCGTGCTACTGCTACTACTTTTGCACCTGCTTCTCCTATTATAGTGGAATGAACTCCTACGCCTGGAACTCCTCTTTACCGCATTTCTTCCTCTTCTGCAAGAGTCATGTTCACTGCTCCTGCACCTCTAACTTCAACAGGAACTTCCGCATCTCTATTCGCATCTTCCTCATATGTAGTCTCTACGCTTGAAAAAAAAAGGCTTTTTGATCGCATCTGAAACAACTACAAGTGCGTGCATTTCCCTATCAATGCCCTTACCTGCCTGCCTTGAACTACTGCACTTGCGCATACCTTTTCTTGCTCGAGACAGAAGATAGCTTGAACTGGCATTGTAAAGATATATAGCCAATAGAAAGAAGTATTCCCAAGCTGGAGAGGAGAGAAATGGAATTTCAAGGCTTTCTACCAATGACCGGAGACCAGAAAGGGGAATCGAGAGATAAGCCTTGAGCGGTCAGACCAATTACGATCGATTCGCTAAACATTCGACGATTCGAGATGAGCCGCTAAAAGAAGGAAGGGCGATAGAGAGAGGTGGAAGGAAGACAGCCTCTCATGCATTACCAGAAGGAGACAGCGCGGAGAGCGTTAAGACCTAG

mRNA sequence

ATGGCTGTGATTCAATATGAAAAGGCCAGCACTCACTCTTCAGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGAGGGGCAGAAGATGAGTTGGGAGTTTCATCGAGATTACTATCACTCGTCCTAACCTCTCATATGTTGTGGGGATTGGTTGTCAATTTAGAGTTATCCCCTTACACTGGGAGTGCTGCTCAAGCGCACAGGGTATTGGCATCAAAAAGAGGGCCTAATGCGCCCGGAACTATGGCACCGAAACGGGTCTGCGGGCCGGCAACCCGACCAGCTAAGAGCAACTCCAAGCTTGAGGAAGAATACGATATCACTAAAGCAACCGAACGGATCTTAGCCAATGACCGGCTTAGGCCGAGAGCACCAGTAGGCGCGCTCCGCTCTAGAAAGTCACTGATAGCTTCTTCTCGCGATGAGACAGAGTACACTGATATCGATGAGAGGTATAGAATTACAGACAGAGTGAGATGTAGAACCTGTACTAGATTGAAAGAATCAATGGCAATAGAATTCCTGCTCAGGTTAAATGTAAGAACTATCGGCAGACGAAAGAGAACTTATTTAGACGAAAAGTGTGCCGGTGCCATTACCCCAAAAAACCCTACATTAGCTGTTCGGGTGGAATCAGACATAAACCAAGTCCAAGAAGACCGAGGAGGCCTTGGGGGGAAGACCAATTACGATCGATTCGCTAAACATTCGACGATTCGAGATGAGCCGCTAAAAGAAGGAAGGGCGATAGAGAGAGGTGGAAGGAAGACAGCCTCTCATGCATTACCAGAAGGAGACAGCGCGGAGAGCGTTAAGACCTAG

Coding sequence (CDS)

ATGGCTGTGATTCAATATGAAAAGGCCAGCACTCACTCTTCAGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGAGGGGCAGAAGATGAGTTGGGAGTTTCATCGAGATTACTATCACTCGTCCTAACCTCTCATATGTTGTGGGGATTGGTTGTCAATTTAGAGTTATCCCCTTACACTGGGAGTGCTGCTCAAGCGCACAGGGTATTGGCATCAAAAAGAGGGCCTAATGCGCCCGGAACTATGGCACCGAAACGGGTCTGCGGGCCGGCAACCCGACCAGCTAAGAGCAACTCCAAGCTTGAGGAAGAATACGATATCACTAAAGCAACCGAACGGATCTTAGCCAATGACCGGCTTAGGCCGAGAGCACCAGTAGGCGCGCTCCGCTCTAGAAAGTCACTGATAGCTTCTTCTCGCGATGAGACAGAGTACACTGATATCGATGAGAGGTATAGAATTACAGACAGAGTGAGATGTAGAACCTGTACTAGATTGAAAGAATCAATGGCAATAGAATTCCTGCTCAGGTTAAATGTAAGAACTATCGGCAGACGAAAGAGAACTTATTTAGACGAAAAGTGTGCCGGTGCCATTACCCCAAAAAACCCTACATTAGCTGTTCGGGTGGAATCAGACATAAACCAAGTCCAAGAAGACCGAGGAGGCCTTGGGGGGAAGACCAATTACGATCGATTCGCTAAACATTCGACGATTCGAGATGAGCCGCTAAAAGAAGGAAGGGCGATAGAGAGAGGTGGAAGGAAGACAGCCTCTCATGCATTACCAGAAGGAGACAGCGCGGAGAGCGTTAAGACCTAG

Protein sequence

MAVIQYEKASTHSSENIEMHVIIKVLIPESDWGDNSFKALTYIPRKTFPATEEKIARGAEDELGVSSRLLSLVLTSHMLWGLVVNLELSPYTGSAAQAHRVLASKRGPNAPGTMAPKRVCGPATRPAKSNSKLEEEYDITKATERILANDRLRPRAPVGALRSRKSLIASSRDETEYTDIDERYRITDRVRCRTCTRLKESMAIEFLLRLNVRTIGRRKRTYLDEKCAGAITPKNPTLAVRVESDINQVQEDRGGLGGKTNYDRFAKHSTIRDEPLKEGRAIERGGRKTASHALPEGDSAESVKT
Homology
[Close]
BLAST of Cla97C03G062290 vs. NCBI nr
Match: YP_009045714.1 (orf158 (mitochondrion) [Batis maritima] >AIC83317.1 orf158 (mitochondrion) [Batis maritima])

HSP 1 Score: 75.9 bits (185), Expect = 2.7e-10
Identity = 45/62 (72.58%), Postives = 48/62 (77.42%), Query Frame = 0 

Query: 1   MAVIQYEKASTHSSENI---EMHVIIKVLIPESDW--GDNSFKALTYIPRKTFPATEEKI 58
           MAVI    ASTHSS+NI     +VI KV +PESDW   DNSFKALTYIPRKTFPATEEKI
Sbjct: 57  MAVI---PASTHSSDNIYPQGHNVIRKVFLPESDWVGEDNSFKALTYIPRKTFPATEEKI 115

[Close]
BLAST of Cla97C03G062290 vs. TrEMBL
Match: tr|A0A068BCZ4|A0A068BCZ4_BATMA (Orf158 OS=Batis maritima OX=4436 GN=orf158 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.8e-10
Identity = 45/62 (72.58%), Postives = 48/62 (77.42%), Query Frame = 0 

Query: 1   MAVIQYEKASTHSSENI---EMHVIIKVLIPESDW--GDNSFKALTYIPRKTFPATEEKI 58
           MAVI    ASTHSS+NI     +VI KV +PESDW   DNSFKALTYIPRKTFPATEEKI
Sbjct: 57  MAVI---PASTHSSDNIYPQGHNVIRKVFLPESDWVGEDNSFKALTYIPRKTFPATEEKI 115

The following BLAST results are available for this feature:
BLAST of Cla97C03G062290 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009045714.12.7e-1072.58orf158 (mitochondrion) [Batis maritima] >AIC83317.1 orf158 (mitochondrion) [Bati... [more]
BLAST of Cla97C03G062290 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A068BCZ4|A0A068BCZ4_BATMA1.8e-1072.58Orf158 OS=Batis maritima OX=4436 GN=orf158 PE=4 SV=1[more]
BLAST of Cla97C03G062290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C03G062290 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G062290.1Cla97C03G062290.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..305

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C03G062290Silver-seed gourdcarwmbB0561
Cla97C03G062290Silver-seed gourdcarwmbB1022
Cla97C03G062290Cucumber (Gy14) v2cgybwmbB039
Cla97C03G062290Cucumber (Gy14) v1cgywmbB609
Cla97C03G062290Cucurbita moschata (Rifu)cmowmbB057
Cla97C03G062290Cucurbita moschata (Rifu)cmowmbB099
Cla97C03G062290Wild cucumber (PI 183967)cpiwmbB040
Cla97C03G062290Cucumber (Chinese Long) v3cucwmbB038
Cla97C03G062290Cucumber (Chinese Long) v2cuwmbB040
Cla97C03G062290Bottle gourd (USVL1VR-Ls)lsiwmbB365
Cla97C03G062290Melon (DHL92) v3.6.1medwmbB231
Cla97C03G062290Melon (DHL92) v3.5.1mewmbB246
Cla97C03G062290Watermelon (Charleston Gray)wcgwmbB186
Cla97C03G062290Wax gourdwgowmbB630
Cla97C03G062290Wax gourdwgowmbB641